FFCP PHASE1:Mm9::chr2:60122349..60122358,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66205 | |EntrezGene=66205 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |MCL_coexpression_id=200 | ||
|TSSclassifier=NA | |||
|UniProt=Q9DCG2 | |UniProt=Q9DCG2 | ||
|association_with_transcript=116bp_to_ENSMUST00000028356,NM_025422,uc008jub.1,uc008juc.1_5end | |association_with_transcript=116bp_to_ENSMUST00000028356,NM_025422,uc008jub.1,uc008juc.1_5end | ||
|cluster_id=chr2:60122349..60122358,- | |||
|description=CAGE_peak_3_at_Cd302_5end | |description=CAGE_peak_3_at_Cd302_5end | ||
|id=chr2:60122349..60122358,- | |id=chr2:60122349..60122358,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.95e-10,3;CL:0002540,1.95e-10,3;CL:0000182,3.98e-10,5;CL:0002194,1.99e-07,4;CL:0000766,1.99e-07,4;CL:0000234,1.99e-07,4;CL:0000576,1.99e-07,4;CL:0000235,1.99e-07,4;CL:0000864,1.99e-07,4;CL:0002009,1.99e-07,4;CL:0000040,1.99e-07,4;CL:0000559,1.99e-07,4;CL:0002476,2.94e-07,2;CL:0002320,3.21e-07,46;CL:0000134,3.21e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.11e-12!70;UBERON:0002365!1.53e-11!25;UBERON:0002330!1.53e-11!25;UBERON:0002107!2.09e-11!22;UBERON:0007499!2.09e-11!22;UBERON:0006925!2.09e-11!22;UBERON:0009497!2.09e-11!22;UBERON:0000015!2.09e-11!22;UBERON:0002423!2.09e-11!22;UBERON:0006235!2.09e-11!22;UBERON:0008835!2.09e-11!22;UBERON:0003894!2.09e-11!22;UBERON:0004161!2.09e-11!22;UBERON:0008836!2.09e-11!22;UBERON:0009569!3.16e-11!66;UBERON:0009854!1.36e-10!23;UBERON:0009856!1.36e-10!23;UBERON:0005172!2.03e-09!49;UBERON:0005173!2.03e-09!49;UBERON:0002417!2.03e-09!49;UBERON:0000916!2.03e-09!49;UBERON:0005911!3.36e-09!69;UBERON:0005057!7.17e-09!51;UBERON:0005256!2.60e-08!47;UBERON:0002100!2.01e-07!98;UBERON:0005177!3.14e-07!85;UBERON:0000466!4.84e-07!79;UBERON:0000490!6.25e-07!66 | |ontology_enrichment_uberon=UBERON:0002405!1.11e-12!70;UBERON:0002365!1.53e-11!25;UBERON:0002330!1.53e-11!25;UBERON:0002107!2.09e-11!22;UBERON:0007499!2.09e-11!22;UBERON:0006925!2.09e-11!22;UBERON:0009497!2.09e-11!22;UBERON:0000015!2.09e-11!22;UBERON:0002423!2.09e-11!22;UBERON:0006235!2.09e-11!22;UBERON:0008835!2.09e-11!22;UBERON:0003894!2.09e-11!22;UBERON:0004161!2.09e-11!22;UBERON:0008836!2.09e-11!22;UBERON:0009569!3.16e-11!66;UBERON:0009854!1.36e-10!23;UBERON:0009856!1.36e-10!23;UBERON:0005172!2.03e-09!49;UBERON:0005173!2.03e-09!49;UBERON:0002417!2.03e-09!49;UBERON:0000916!2.03e-09!49;UBERON:0005911!3.36e-09!69;UBERON:0005057!7.17e-09!51;UBERON:0005256!2.60e-08!47;UBERON:0002100!2.01e-07!98;UBERON:0005177!3.14e-07!85;UBERON:0000466!4.84e-07!79;UBERON:0000490!6.25e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.08e-23,22;UBERON:0007499,2.08e-23,22;UBERON:0006925,2.08e-23,22;UBERON:0009497,2.08e-23,22;UBERON:0000015,2.08e-23,22;UBERON:0002423,2.08e-23,22;UBERON:0006235,2.08e-23,22;UBERON:0008835,2.08e-23,22;UBERON:0003894,2.08e-23,22;UBERON:0004161,2.08e-23,22;UBERON:0008836,2.08e-23,22;UBERON:0009854,2.94e-22,23;UBERON:0009856,2.94e-22,23;UBERON:0002365,3.12e-20,25;UBERON:0002330,3.12e-20,25;UBERON:0005256,5.14e-15,45;UBERON:0000490,1.21e-11,66;UBERON:0003914,8.48e-11,47;UBERON:0005911,8.67e-11,69;UBERON:0005172,3.34e-10,49;UBERON:0005173,3.34e-10,49;UBERON:0002417,3.34e-10,49;UBERON:0000916,3.34e-10,49;UBERON:0009569,4.17e-10,66;UBERON:0003104,4.17e-10,61;UBERON:0009142,4.17e-10,61;UBERON:0003929,4.27e-10,55;UBERON:0002100,2.16e-09,90;UBERON:0001041,1.03e-08,80;UBERON:0002371,1.60e-08,16;UBERON:0005177,8.13e-08,79;UBERON:0002368,8.91e-08,60;UBERON:0002204,2.04e-07,32;UBERON:0002384,3.21e-07,46;UBERON:0002530,6.13e-07,65 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,1.33243904726265,0.404950534779652,0,0,0.548457734422955,0,0.255129870453209,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0.418531630736908,3.1253413780952,1.57057123192139,0,0,0.485510353031154,1.25896817975577,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3983954765024,21.7550599764734,16.3410426437603,2.99600110518405,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,12.9063581547208,8.15965600449301,9.17495425784289,11.0461990966104,6.72040330646003,1.68533304158102,0,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,2.51204535381932,0,0.29688427812965,0,0.608930956624282,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.658795818896044,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,3.55743152504579,0,0,0.224862112384854,0,0.482354319504834,0.50925170356284,0.863088412352432,2.43202840162553,2.19649130550465,2.87536413054709,4.09355042435354,2.49630138491648,2.77836765741823,5.56131981917928,6.27176577772377,0.923765950833023,0,0,0,0,0.167506257441816,0.238043640886014,1.17080188714679,0.157635144106191,0.44292937929755,0.637819074629948,1.14704320301017,0.690739927463582,1.01254341007058,9.04747703635634,13.053736411649,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0,0,0,0,0.512612642393558,1.03193433981611,0.555583582109135,0.565105371014073,0.683471138605126,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0.537080087002444,0,0.360586348559907,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0,0.192075457214608,0.17230640686684,0.476293691283074,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,1.36499771816861,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,1.33243904726265,0.404950534779652,0,0,0.548457734422955,0,0.255129870453209,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0.418531630736908,3.1253413780952,1.57057123192139,0,0,0.485510353031154,1.25896817975577,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3983954765024,21.7550599764734,16.3410426437603,2.99600110518405,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,12.9063581547208,8.15965600449301,9.17495425784289,11.0461990966104,6.72040330646003,1.68533304158102,0,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,2.51204535381932,0,0.29688427812965,0,0.608930956624282,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.658795818896044,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,3.55743152504579,0,0,0.224862112384854,0,0.482354319504834,0.50925170356284,0.863088412352432,2.43202840162553,2.19649130550465,2.87536413054709,4.09355042435354,2.49630138491648,2.77836765741823,5.56131981917928,6.27176577772377,0.923765950833023,0,0,0,0,0.167506257441816,0.238043640886014,1.17080188714679,0.157635144106191,0.44292937929755,0.637819074629948,1.14704320301017,0.690739927463582,1.01254341007058,9.04747703635634,13.053736411649,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0,0,0,0,0.512612642393558,1.03193433981611,0.555583582109135,0.565105371014073,0.683471138605126,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0.537080087002444,0,0.360586348559907,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0,0.192075457214608,0.17230640686684,0.476293691283074,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p3@Cd302 | |short_description=p3@Cd302 | ||
}} | }} |
Latest revision as of 19:39, 26 September 2015
Short description: | p3@Cd302 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cd302_5end |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | 116bp_to_ENSMUST00000028356, NM_025422, uc008jub.1, uc008juc.1_5end |
EntrezGene: | Cd302 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.95e-10 | 3 |
mesenchymal stem cell of the bone marrow | 1.95e-10 | 3 |
hepatocyte | 3.98e-10 | 5 |
monopoietic cell | 1.99e-07 | 4 |
myeloid leukocyte | 1.99e-07 | 4 |
phagocyte | 1.99e-07 | 4 |
monocyte | 1.99e-07 | 4 |
macrophage | 1.99e-07 | 4 |
tissue-resident macrophage | 1.99e-07 | 4 |
macrophage dendritic cell progenitor | 1.99e-07 | 4 |
monoblast | 1.99e-07 | 4 |
promonocyte | 1.99e-07 | 4 |
bone marrow macrophage | 2.94e-07 | 2 |
connective tissue cell | 3.21e-07 | 46 |
mesenchymal cell | 3.21e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
liver | 2.08e-23 | 22 |
epithelial sac | 2.08e-23 | 22 |
digestive gland | 2.08e-23 | 22 |
epithelium of foregut-midgut junction | 2.08e-23 | 22 |
anatomical boundary | 2.08e-23 | 22 |
hepatobiliary system | 2.08e-23 | 22 |
foregut-midgut junction | 2.08e-23 | 22 |
hepatic diverticulum | 2.08e-23 | 22 |
liver primordium | 2.08e-23 | 22 |
septum transversum | 2.08e-23 | 22 |
liver bud | 2.08e-23 | 22 |
digestive tract diverticulum | 2.94e-22 | 23 |
sac | 2.94e-22 | 23 |
exocrine gland | 3.12e-20 | 25 |
exocrine system | 3.12e-20 | 25 |
trunk mesenchyme | 5.14e-15 | 45 |
unilaminar epithelium | 1.21e-11 | 66 |
epithelial tube | 8.48e-11 | 47 |
endo-epithelium | 8.67e-11 | 69 |
abdomen element | 3.34e-10 | 49 |
abdominal segment element | 3.34e-10 | 49 |
abdominal segment of trunk | 3.34e-10 | 49 |
abdomen | 3.34e-10 | 49 |
subdivision of trunk | 4.17e-10 | 66 |
mesenchyme | 4.17e-10 | 61 |
entire embryonic mesenchyme | 4.17e-10 | 61 |
gut epithelium | 4.27e-10 | 55 |
trunk | 2.16e-09 | 90 |
foregut | 1.03e-08 | 80 |
bone marrow | 1.60e-08 | 16 |
trunk region element | 8.13e-08 | 79 |
endocrine gland | 8.91e-08 | 60 |
musculoskeletal system | 2.04e-07 | 32 |
connective tissue | 3.21e-07 | 46 |
gland | 6.13e-07 | 65 |