FFCP PHASE1:Mm9::chr2:51928343..51928374,+: Difference between revisions
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{{FFCP|EntrezGene=51869|HGNC=|MCL_coexpression_id=1134|UniProt=Q6PR54,A2AQB0|association_with_transcript=0bp_to_ENSMUST00000069794,ENSMUST00000112692,ENSMUST00000112693,NM_175238,uc008jqq.1,uc008jqr.1_5end|description=CAGE_peak_1_at_Rif1_5end|id=chr2:51928343..51928374,+|ontology_enrichment_celltype=CL:0000084!7.41e-07!11;CL:0000827!7.41e-07!11|ontology_enrichment_celltype_v019_2=CL:0000084,7.41e-07,11;CL:0000827,7.41e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!4.04e-13!147;UBERON:0004177!5.45e-12!29;UBERON:0003408!4.73e-10!24;UBERON:0002370!6.13e-10!23;UBERON:0000974!6.13e-10!23;UBERON:0004807!6.13e-10!23;UBERON:0005058!6.13e-10!23;UBERON:0003351!6.13e-10!23;UBERON:0009113!6.13e-10!23;UBERON:0003295!6.13e-10!23;UBERON:0009722!6.13e-10!23;UBERON:0005562!6.13e-10!23;UBERON:0007690!6.13e-10!23;UBERON:0006562!3.01e-09!24;UBERON:0001557!3.01e-09!24;UBERON:0001042!3.01e-09!24;UBERON:0008814!3.01e-09!24;UBERON:0009145!3.01e-09!24;UBERON:0001004!1.61e-08!42;UBERON:0000065!2.35e-08!41;UBERON:0005057!1.46e-07!51;UBERON:0002390!1.91e-07!45;UBERON:0003061!1.91e-07!45;UBERON:0000072!2.91e-07!27;UBERON:0002193!9.50e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.74e-13,134;UBERON:0004177,5.45e-12,29;UBERON:0005057,5.45e-12,29;UBERON:0000153,2.83e-11,43;UBERON:0007811,4.39e-10,36;UBERON:0003408,4.73e-10,24;UBERON:0002370,6.13e-10,23;UBERON:0000974,6.13e-10,23;UBERON:0004807,6.13e-10,23;UBERON:0005058,6.13e-10,23;UBERON:0003351,6.13e-10,23;UBERON:0009113,6.13e-10,23;UBERON:0003295,6.13e-10,23;UBERON:0009722,6.13e-10,23;UBERON:0005562,6.13e-10,23;UBERON:0007690,6.13e-10,23;UBERON:0006562,3.01e-09,24;UBERON:0001557,3.01e-09,24;UBERON:0001042,3.01e-09,24;UBERON:0008814,3.01e-09,24;UBERON:0009145,3.01e-09,24;UBERON:0000077,4.82e-09,35;UBERON:0001004,1.61e-08,42;UBERON:0000065,2.35e-08,41;UBERON:0002390,1.91e-07,45;UBERON:0003061,1.91e-07,45;UBERON:0000072,2.91e-07,27;UBERON:0001041,9.16e-07,80;UBERON:0002193,9.50e-07,48;UBERON:0002405,9.50e-07,48|phase1_expression=12.4916100741739,4.88565570695105,2.72999543633722,5.44435580352294,5.00895729946347,16.6200479192771,13.783145795136,26.21203465864,41.6734617568934,44.4722600011788,42.4620561199252,45.9487635813138,33.2129416066539,29.8103572248781,27.9812199925157,35.6356470606094,45.4715220783295,21.6091583270393,24.2692547482158,25.8877687596798,13.436839843869,16.7801707529496,21.9407822876706,5.75972722056264,6.42345986988076,4.59385571292016,3.4460959692726,6.24866574789078,7.22088993934221,11.089325709437,6.65191531965914,27.9413496322238,20.9122027778754,31.6963362030877,21.9527231010969,23.1066157048304,26.9503550266327,4.18531630736908,6.2506827561904,12.0410461113974,5.29408339227913,12.294818729252,7.76816564849846,8.56098362233926,5.87986201073184,5.50640256485045,1.56478268869608,1.52617609466313,0.878744730937887,2.3331587888914,1.95980990275508,0,13.5903910906766,24.6623128283857,25.2070349356848,4.3734104126111,5.15760191889762,3.09403255366465,5.86717736492834,2.64495489636016,3.80298842103708,1.69422266034566,3.55717918444456,0.449949858640699,1.97773272513395,0.7104801149461,2.39680088414724,1.92109152660777,7.15458324928496,4.99521971827255,4.20649922702764,5.42736870367227,4.41737081903227,7.96190194897201,6.03826467414889,2.75765635983006,8.8092704799511,10.7257363991558,11.981309593987,3.95658863190582,4.20843160571084,4.16730696445408,7.2587579740359,7.31591393041184,12.835052813252,11.1958862479994,12.386336229522,8.20157561631323,7.42116694665204,7.3304413303582,18.8411917656091,9.46466264679525,0.679971333707751,1.07940638327563,11.0461990966104,6.2723764193627,7.5839986871146,3.91989741929533,3.63700406444016,3.88673531961374,11.8308472612412,12.8326477414318,15.2883143823987,7.11066703153331,10.1750789275271,9.88103475352884,7.58286667522175,9.1347103775248,25.3759125974228,13.0629082377046,13.3583701609925,11.8741536541735,9.68585088475446,11.1534754008941,16.1096528775916,11.5613264023301,5.6854842578906,9.25435884287435,19.4614321428972,14.3972496453194,20.9799442537374,14.5462575940567,9.31958806090611,44.2099003487436,36.8626203991681,8.9409969323007,21.9261677845834,20.9965955847693,19.695885196325,16.1773890557209,9.15001205637253,8.92145900001337,11.8200537730748,11.2514801225345,12.6750707181332,10.8701646255398,15.9887801244997,14.9288364732112,8.08712826987759,9.89076722666428,17.8265006858904,20.921091503446,17.8261508507296,21.4000841326715,24.2209936978727,23.9572656932669,22.6758173434544,18.3679393224701,15.3053274982318,28.3659120251729,26.5686197487563,16.001288467213,21.1315909411454,17.4126083261083,13.9931852757402,23.0879749509452,11.2354109970118,12.8673953557358,14.4923384691752,19.4698226183372,18.0585066185444,20.1669508836337,17.5191104333056,21.2505370287196,19.591923336697,13.4869687955237,11.5357562601836,15.4130251924664,19.9117418395311,17.8942535846214,12.6467342891535,10.6725990820493,10.9775057645525,13.5548482947975,10.5144974282064,11.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=51869 | |||
|HGNC= | |||
|MCL_coexpression_id=1134 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PR54,A2AQB0 | |||
|association_with_transcript=0bp_to_ENSMUST00000069794,ENSMUST00000112692,ENSMUST00000112693,NM_175238,uc008jqq.1,uc008jqr.1_5end | |||
|cluster_id=chr2:51928343..51928374,+ | |||
|description=CAGE_peak_1_at_Rif1_5end | |||
|id=chr2:51928343..51928374,+ | |||
|ontology_enrichment_celltype=CL:0000084!7.41e-07!11;CL:0000827!7.41e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.41e-07,11;CL:0000827,7.41e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!4.04e-13!147;UBERON:0004177!5.45e-12!29;UBERON:0003408!4.73e-10!24;UBERON:0002370!6.13e-10!23;UBERON:0000974!6.13e-10!23;UBERON:0004807!6.13e-10!23;UBERON:0005058!6.13e-10!23;UBERON:0003351!6.13e-10!23;UBERON:0009113!6.13e-10!23;UBERON:0003295!6.13e-10!23;UBERON:0009722!6.13e-10!23;UBERON:0005562!6.13e-10!23;UBERON:0007690!6.13e-10!23;UBERON:0006562!3.01e-09!24;UBERON:0001557!3.01e-09!24;UBERON:0001042!3.01e-09!24;UBERON:0008814!3.01e-09!24;UBERON:0009145!3.01e-09!24;UBERON:0001004!1.61e-08!42;UBERON:0000065!2.35e-08!41;UBERON:0005057!1.46e-07!51;UBERON:0002390!1.91e-07!45;UBERON:0003061!1.91e-07!45;UBERON:0000072!2.91e-07!27;UBERON:0002193!9.50e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.74e-13,134;UBERON:0004177,5.45e-12,29;UBERON:0005057,5.45e-12,29;UBERON:0000153,2.83e-11,43;UBERON:0007811,4.39e-10,36;UBERON:0003408,4.73e-10,24;UBERON:0002370,6.13e-10,23;UBERON:0000974,6.13e-10,23;UBERON:0004807,6.13e-10,23;UBERON:0005058,6.13e-10,23;UBERON:0003351,6.13e-10,23;UBERON:0009113,6.13e-10,23;UBERON:0003295,6.13e-10,23;UBERON:0009722,6.13e-10,23;UBERON:0005562,6.13e-10,23;UBERON:0007690,6.13e-10,23;UBERON:0006562,3.01e-09,24;UBERON:0001557,3.01e-09,24;UBERON:0001042,3.01e-09,24;UBERON:0008814,3.01e-09,24;UBERON:0009145,3.01e-09,24;UBERON:0000077,4.82e-09,35;UBERON:0001004,1.61e-08,42;UBERON:0000065,2.35e-08,41;UBERON:0002390,1.91e-07,45;UBERON:0003061,1.91e-07,45;UBERON:0000072,2.91e-07,27;UBERON:0001041,9.16e-07,80;UBERON:0002193,9.50e-07,48;UBERON:0002405,9.50e-07,48 | |||
|phase1_expression=12.4916100741739,4.88565570695105,2.72999543633722,5.44435580352294,5.00895729946347,16.6200479192771,13.783145795136,26.21203465864,41.6734617568934,44.4722600011788,42.4620561199252,45.9487635813138,33.2129416066539,29.8103572248781,27.9812199925157,35.6356470606094,45.4715220783295,21.6091583270393,24.2692547482158,25.8877687596798,13.436839843869,16.7801707529496,21.9407822876706,5.75972722056264,6.42345986988076,4.59385571292016,3.4460959692726,6.24866574789078,7.22088993934221,11.089325709437,6.65191531965914,27.9413496322238,20.9122027778754,31.6963362030877,21.9527231010969,23.1066157048304,26.9503550266327,4.18531630736908,6.2506827561904,12.0410461113974,5.29408339227913,12.294818729252,7.76816564849846,8.56098362233926,5.87986201073184,5.50640256485045,1.56478268869608,1.52617609466313,0.878744730937887,2.3331587888914,1.95980990275508,0,13.5903910906766,24.6623128283857,25.2070349356848,4.3734104126111,5.15760191889762,3.09403255366465,5.86717736492834,2.64495489636016,3.80298842103708,1.69422266034566,3.55717918444456,0.449949858640699,1.97773272513395,0.7104801149461,2.39680088414724,1.92109152660777,7.15458324928496,4.99521971827255,4.20649922702764,5.42736870367227,4.41737081903227,7.96190194897201,6.03826467414889,2.75765635983006,8.8092704799511,10.7257363991558,11.981309593987,3.95658863190582,4.20843160571084,4.16730696445408,7.2587579740359,7.31591393041184,12.835052813252,11.1958862479994,12.386336229522,8.20157561631323,7.42116694665204,7.3304413303582,18.8411917656091,9.46466264679525,0.679971333707751,1.07940638327563,11.0461990966104,6.2723764193627,7.5839986871146,3.91989741929533,3.63700406444016,3.88673531961374,11.8308472612412,12.8326477414318,15.2883143823987,7.11066703153331,10.1750789275271,9.88103475352884,7.58286667522175,9.1347103775248,25.3759125974228,13.0629082377046,13.3583701609925,11.8741536541735,9.68585088475446,11.1534754008941,16.1096528775916,11.5613264023301,5.6854842578906,9.25435884287435,19.4614321428972,14.3972496453194,20.9799442537374,14.5462575940567,9.31958806090611,44.2099003487436,36.8626203991681,8.9409969323007,21.9261677845834,20.9965955847693,19.695885196325,16.1773890557209,9.15001205637253,8.92145900001337,11.8200537730748,11.2514801225345,12.6750707181332,10.8701646255398,15.9887801244997,14.9288364732112,8.08712826987759,9.89076722666428,17.8265006858904,20.921091503446,17.8261508507296,21.4000841326715,24.2209936978727,23.9572656932669,22.6758173434544,18.3679393224701,15.3053274982318,28.3659120251729,26.5686197487563,16.001288467213,21.1315909411454,17.4126083261083,13.9931852757402,23.0879749509452,11.2354109970118,12.8673953557358,14.4923384691752,19.4698226183372,18.0585066185444,20.1669508836337,17.5191104333056,21.2505370287196,19.591923336697,13.4869687955237,11.5357562601836,15.4130251924664,19.9117418395311,17.8942535846214,12.6467342891535,10.6725990820493,10.9775057645525,13.5548482947975,10.5144974282064,11.7311258112384,3.96502539580558,8.72686869989696,21.1155368029882,24.8493238890669,21.1342636568233,17.7481501668541,15.5664630691409,11.4135375667535,12.3377556001573,8.56434564564857,10.0534083520108,7.95825888164603,14.2323783596958,14.3811105384675,11.2391785934841,8.56307474993779,6.06937283049861,18.8510045806053,16.9061603509621,17.3103628668517,14.9343415119072,15.4298803758701,16.8209188750524,13.727743762103,11.303908404579,9.37818445805684,4.74324203339438,34.3700917775154,31.2528802229993,28.1077640481067,25.7632354163399,23.8765388154893,18.8423130318251,16.3986798346962,17.5106044917038,13.7280706594041,14.3768206527355,9.67566463938109,9.04909252032226,11.36604950762,9.68746033018326,6.75420929908714,14.965008403495,22.9284608242287,28.5188708773545,24.9525276089527,22.9996443322732,21.2732946951106,13.3304438896168,13.2690880543303,21.7536498866544,17.0527811029557,19.9318460821859,11.9620219742489,11.7425787668809,12.2951699794285,4.52373851817817,3.26343410291226,18.6870423747234,11.8652800911035,12.0412942490844,10.7834751664827,6.88526770582037,10.0988370881749,14.1978698737316,14.4462335389756,12.0637102730367,11.709471099675,11.3627323782021,14.7199796010193,15.382806663646,11.3979784585412,9.88219444866309,13.4954952897159,15.329529202493,8.90328018336276,16.6144698540648,19.4664745107592,10.619611067197,15.5379607139188,13.302236506449,13.9567759019365,7.97315110778086,14.1420168054207,15.247269296925,18.5402202033528,17.8248689192361,12.6414703174326,9.48767477174989,10.3135543248187,14.9793426531667,17.4659261210371,4.39819524861365,9.85950361145325,14.5418991586664,14.2695054081656,12.0120785039548,7.00269382963578,7.97883807416615,4.87213762986786,8.60060752414351,14.6748765117917,16.3079070962865,17.5510611540934,16.3540111284297,18.712062570937,12.8251568117134,11.6817940266621,24.9471485964865,12.5895989457566,23.7048995033231,28.4436370077083,30.7562012372307,27.6821589579892,26.1766782190537,22.5321838241089,23.7703954943609,2.86401185404534,19.4546636052398,22.1618219168265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| |||
|short_description=p1@Rif1 | |||
}} |
Latest revision as of 18:22, 26 September 2015
Short description: | p1@Rif1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rif1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1134 |
Association with transcript: | 0bp_to_ENSMUST00000069794, ENSMUST00000112692, ENSMUST00000112693, NM_175238, uc008jqq.1, uc008jqr.1_5end |
EntrezGene: | Rif1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.41e-07 | 11 |
pro-T cell | 7.41e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
primordium | 1.74e-13 | 134 |
hemopoietic organ | 5.45e-12 | 29 |
immune organ | 5.45e-12 | 29 |
anterior region of body | 2.83e-11 | 43 |
craniocervical region | 4.39e-10 | 36 |
gland of gut | 4.73e-10 | 24 |
thymus | 6.13e-10 | 23 |
neck | 6.13e-10 | 23 |
respiratory system epithelium | 6.13e-10 | 23 |
hemolymphoid system gland | 6.13e-10 | 23 |
pharyngeal epithelium | 6.13e-10 | 23 |
thymic region | 6.13e-10 | 23 |
pharyngeal gland | 6.13e-10 | 23 |
entire pharyngeal arch endoderm | 6.13e-10 | 23 |
thymus primordium | 6.13e-10 | 23 |
early pharyngeal endoderm | 6.13e-10 | 23 |
pharynx | 3.01e-09 | 24 |
upper respiratory tract | 3.01e-09 | 24 |
chordate pharynx | 3.01e-09 | 24 |
pharyngeal arch system | 3.01e-09 | 24 |
pharyngeal region of foregut | 3.01e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 4.82e-09 | 35 |
respiratory system | 1.61e-08 | 42 |
respiratory tract | 2.35e-08 | 41 |
hematopoietic system | 1.91e-07 | 45 |
blood island | 1.91e-07 | 45 |
segment of respiratory tract | 2.91e-07 | 27 |
foregut | 9.16e-07 | 80 |
hemolymphoid system | 9.50e-07 | 48 |
immune system | 9.50e-07 | 48 |