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FFCP PHASE1:Mm9::chr2:51928343..51928374,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=51869
|EntrezGene=51869
|HGNC=
|HGNC=
|MCL_coexpression_id=1134
|MCL_coexpression_id=1134
|TSSclassifier=NA
|UniProt=Q6PR54,A2AQB0
|UniProt=Q6PR54,A2AQB0
|association_with_transcript=0bp_to_ENSMUST00000069794,ENSMUST00000112692,ENSMUST00000112693,NM_175238,uc008jqq.1,uc008jqr.1_5end
|association_with_transcript=0bp_to_ENSMUST00000069794,ENSMUST00000112692,ENSMUST00000112693,NM_175238,uc008jqq.1,uc008jqr.1_5end
|cluster_id=chr2:51928343..51928374,+
|description=CAGE_peak_1_at_Rif1_5end
|description=CAGE_peak_1_at_Rif1_5end
|id=chr2:51928343..51928374,+
|id=chr2:51928343..51928374,+
|ontology_enrichment_celltype=CL:0000084!7.41e-07!11;CL:0000827!7.41e-07!11
|ontology_enrichment_celltype=CL:0000084!7.41e-07!11;CL:0000827!7.41e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000084,7.41e-07,11;CL:0000827,7.41e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!4.04e-13!147;UBERON:0004177!5.45e-12!29;UBERON:0003408!4.73e-10!24;UBERON:0002370!6.13e-10!23;UBERON:0000974!6.13e-10!23;UBERON:0004807!6.13e-10!23;UBERON:0005058!6.13e-10!23;UBERON:0003351!6.13e-10!23;UBERON:0009113!6.13e-10!23;UBERON:0003295!6.13e-10!23;UBERON:0009722!6.13e-10!23;UBERON:0005562!6.13e-10!23;UBERON:0007690!6.13e-10!23;UBERON:0006562!3.01e-09!24;UBERON:0001557!3.01e-09!24;UBERON:0001042!3.01e-09!24;UBERON:0008814!3.01e-09!24;UBERON:0009145!3.01e-09!24;UBERON:0001004!1.61e-08!42;UBERON:0000065!2.35e-08!41;UBERON:0005057!1.46e-07!51;UBERON:0002390!1.91e-07!45;UBERON:0003061!1.91e-07!45;UBERON:0000072!2.91e-07!27;UBERON:0002193!9.50e-07!48
|ontology_enrichment_uberon=UBERON:0001048!4.04e-13!147;UBERON:0004177!5.45e-12!29;UBERON:0003408!4.73e-10!24;UBERON:0002370!6.13e-10!23;UBERON:0000974!6.13e-10!23;UBERON:0004807!6.13e-10!23;UBERON:0005058!6.13e-10!23;UBERON:0003351!6.13e-10!23;UBERON:0009113!6.13e-10!23;UBERON:0003295!6.13e-10!23;UBERON:0009722!6.13e-10!23;UBERON:0005562!6.13e-10!23;UBERON:0007690!6.13e-10!23;UBERON:0006562!3.01e-09!24;UBERON:0001557!3.01e-09!24;UBERON:0001042!3.01e-09!24;UBERON:0008814!3.01e-09!24;UBERON:0009145!3.01e-09!24;UBERON:0001004!1.61e-08!42;UBERON:0000065!2.35e-08!41;UBERON:0005057!1.46e-07!51;UBERON:0002390!1.91e-07!45;UBERON:0003061!1.91e-07!45;UBERON:0000072!2.91e-07!27;UBERON:0002193!9.50e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.74e-13,134;UBERON:0004177,5.45e-12,29;UBERON:0005057,5.45e-12,29;UBERON:0000153,2.83e-11,43;UBERON:0007811,4.39e-10,36;UBERON:0003408,4.73e-10,24;UBERON:0002370,6.13e-10,23;UBERON:0000974,6.13e-10,23;UBERON:0004807,6.13e-10,23;UBERON:0005058,6.13e-10,23;UBERON:0003351,6.13e-10,23;UBERON:0009113,6.13e-10,23;UBERON:0003295,6.13e-10,23;UBERON:0009722,6.13e-10,23;UBERON:0005562,6.13e-10,23;UBERON:0007690,6.13e-10,23;UBERON:0006562,3.01e-09,24;UBERON:0001557,3.01e-09,24;UBERON:0001042,3.01e-09,24;UBERON:0008814,3.01e-09,24;UBERON:0009145,3.01e-09,24;UBERON:0000077,4.82e-09,35;UBERON:0001004,1.61e-08,42;UBERON:0000065,2.35e-08,41;UBERON:0002390,1.91e-07,45;UBERON:0003061,1.91e-07,45;UBERON:0000072,2.91e-07,27;UBERON:0001041,9.16e-07,80;UBERON:0002193,9.50e-07,48;UBERON:0002405,9.50e-07,48
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|phase1_expression=12.4916100741739,4.88565570695105,2.72999543633722,5.44435580352294,5.00895729946347,16.6200479192771,13.783145795136,26.21203465864,41.6734617568934,44.4722600011788,42.4620561199252,45.9487635813138,33.2129416066539,29.8103572248781,27.9812199925157,35.6356470606094,45.4715220783295,21.6091583270393,24.2692547482158,25.8877687596798,13.436839843869,16.7801707529496,21.9407822876706,5.75972722056264,6.42345986988076,4.59385571292016,3.4460959692726,6.24866574789078,7.22088993934221,11.089325709437,6.65191531965914,27.9413496322238,20.9122027778754,31.6963362030877,21.9527231010969,23.1066157048304,26.9503550266327,4.18531630736908,6.2506827561904,12.0410461113974,5.29408339227913,12.294818729252,7.76816564849846,8.56098362233926,5.87986201073184,5.50640256485045,1.56478268869608,1.52617609466313,0.878744730937887,2.3331587888914,1.95980990275508,0,13.5903910906766,24.6623128283857,25.2070349356848,4.3734104126111,5.15760191889762,3.09403255366465,5.86717736492834,2.64495489636016,3.80298842103708,1.69422266034566,3.55717918444456,0.449949858640699,1.97773272513395,0.7104801149461,2.39680088414724,1.92109152660777,7.15458324928496,4.99521971827255,4.20649922702764,5.42736870367227,4.41737081903227,7.96190194897201,6.03826467414889,2.75765635983006,8.8092704799511,10.7257363991558,11.981309593987,3.95658863190582,4.20843160571084,4.16730696445408,7.2587579740359,7.31591393041184,12.835052813252,11.1958862479994,12.386336229522,8.20157561631323,7.42116694665204,7.3304413303582,18.8411917656091,9.46466264679525,0.679971333707751,1.07940638327563,11.0461990966104,6.2723764193627,7.5839986871146,3.91989741929533,3.63700406444016,3.88673531961374,11.8308472612412,12.8326477414318,15.2883143823987,7.11066703153331,10.1750789275271,9.88103475352884,7.58286667522175,9.1347103775248,25.3759125974228,13.0629082377046,13.3583701609925,11.8741536541735,9.68585088475446,11.1534754008941,16.1096528775916,11.5613264023301,5.6854842578906,9.25435884287435,19.4614321428972,14.3972496453194,20.9799442537374,14.5462575940567,9.31958806090611,44.2099003487436,36.8626203991681,8.9409969323007,21.9261677845834,20.9965955847693,19.695885196325,16.1773890557209,9.15001205637253,8.92145900001337,11.8200537730748,11.2514801225345,12.6750707181332,10.8701646255398,15.9887801244997,14.9288364732112,8.08712826987759,9.89076722666428,17.8265006858904,20.921091503446,17.8261508507296,21.4000841326715,24.2209936978727,23.9572656932669,22.6758173434544,18.3679393224701,15.3053274982318,28.3659120251729,26.5686197487563,16.001288467213,21.1315909411454,17.4126083261083,13.9931852757402,23.0879749509452,11.2354109970118,12.8673953557358,14.4923384691752,19.4698226183372,18.0585066185444,20.1669508836337,17.5191104333056,21.2505370287196,19.591923336697,13.4869687955237,11.5357562601836,15.4130251924664,19.9117418395311,17.8942535846214,12.6467342891535,10.6725990820493,10.9775057645525,13.5548482947975,10.5144974282064,11.7311258112384,3.96502539580558,8.72686869989696,21.1155368029882,24.8493238890669,21.1342636568233,17.7481501668541,15.5664630691409,11.4135375667535,12.3377556001573,8.56434564564857,10.0534083520108,7.95825888164603,14.2323783596958,14.3811105384675,11.2391785934841,8.56307474993779,6.06937283049861,18.8510045806053,16.9061603509621,17.3103628668517,14.9343415119072,15.4298803758701,16.8209188750524,13.727743762103,11.303908404579,9.37818445805684,4.74324203339438,34.3700917775154,31.2528802229993,28.1077640481067,25.7632354163399,23.8765388154893,18.8423130318251,16.3986798346962,17.5106044917038,13.7280706594041,14.3768206527355,9.67566463938109,9.04909252032226,11.36604950762,9.68746033018326,6.75420929908714,14.965008403495,22.9284608242287,28.5188708773545,24.9525276089527,22.9996443322732,21.2732946951106,13.3304438896168,13.2690880543303,21.7536498866544,17.0527811029557,19.9318460821859,11.9620219742489,11.7425787668809,12.2951699794285,4.52373851817817,3.26343410291226,18.6870423747234,11.8652800911035,12.0412942490844,10.7834751664827,6.88526770582037,10.0988370881749,14.1978698737316,14.4462335389756,12.0637102730367,11.709471099675,11.3627323782021,14.7199796010193,15.382806663646,11.3979784585412,9.88219444866309,13.4954952897159,15.329529202493,8.90328018336276,16.6144698540648,19.4664745107592,10.619611067197,15.5379607139188,13.302236506449,13.9567759019365,7.97315110778086,14.1420168054207,15.247269296925,18.5402202033528,17.8248689192361,12.6414703174326,9.48767477174989,10.3135543248187,14.9793426531667,17.4659261210371,4.39819524861365,9.85950361145325,14.5418991586664,14.2695054081656,12.0120785039548,7.00269382963578,7.97883807416615,4.87213762986786,8.60060752414351,14.6748765117917,16.3079070962865,17.5510611540934,16.3540111284297,18.712062570937,12.8251568117134,11.6817940266621,24.9471485964865,12.5895989457566,23.7048995033231,28.4436370077083,30.7562012372307,27.6821589579892,26.1766782190537,22.5321838241089,23.7703954943609,2.86401185404534,19.4546636052398,22.1618219168265,15.4447637375176,12.1271211688392,12.4466661335321,13.4864346384821,12.8939390931524,9.42321391142507,8.16574331738295,18.0188400795208,10.7101658349996,24.9692631893445,19.8550188548517,22.7507890362536,19.6322931686151,22.9780330667458,26.9921648885234,27.3429208172295,34.2890056272074,24.1584120826006,19.8740704317927,25.2808896502543,17.231643299664,17.3581517608558,28.0628977632037,29.8974581764694,29.0074777980647,25.7218261972733,30.7194216523121,30.4918678843406,30.4065158553449,27.3238961720838,28.9449905797065,29.7294590668618,24.7779032624926,10.4295976462997,21.9766093840324,23.6844581449016,18.8030770327768,14.1028403643499,4.69206188627955,13.1869169472431,11.7902608493486,8.02515366456581,11.8597886949584,7.82552902062201,5.15605962095457,8.248952752497,10.2762377965596,8.3093328712867,10.1253375034771,13.0593148935024,7.70342095273148,7.24864436452548,20.8612568644195,27.1336913912701,19.8050982674796,21.8796045361465,15.5113740344707,15.6266982182512,12.6680634846921,16.0707344646337,15.0832028508153,14.9091354940641,16.4761544928656,16.5991180419747,14.7953581802414,15.3660365771686,15.5650120869712,17.6228665774737,18.5414921511769,15.6256468575601,12.7746629249025,14.2782952530365,15.0862471049583,11.3584515941976,14.0677352068919,15.1160273297622,14.9633914860376,15.3998586362851,14.8171658026946,15.2580432633949,17.1113183445786,11.7839877048125,16.6089025373844,15.7607171800902,17.187703813127,14.0992525479229,14.2750892126045,8.99318080576605,13.8019648982791,10.5286816483666,11.4772999241306,12.5737108898124,10.2021847672985
|short_description=p1@Rif1
|short_description=p1@Rif1
}}
}}

Latest revision as of 18:22, 26 September 2015

Short description:p1@Rif1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rif1_5end
Coexpression cluster:MCL_coexpression_mm9:1134
Association with transcript: 0bp_to_ENSMUST00000069794, ENSMUST00000112692, ENSMUST00000112693, NM_175238, uc008jqq.1, uc008jqr.1_5end
EntrezGene:Rif1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rif1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.78
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E642.46
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F145.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.21
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A335.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A545.47
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.61
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.89
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.94
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B97.22
Ileum epithelium, pool2.CNhs13232.10253-104C111.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I327.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I924.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A125.21
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D97.42
Mouse Schwann, donor2.CNhs12573.11746-123F97.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H925.38
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C513.36
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I19.69
adrenal gland, embryo E18.CNhs11026.1262-18F511.15
adrenal gland, neonate N00.CNhs11191.1311-23C116.11
adrenal gland, neonate N25.CNhs11223.1377-27I311.56
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H19.25
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A620.98
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B244.21
cerebellum, neonate N30.CNhs11135.1395-42I236.86
colon, adult.CNhs10468.36-18H78.94
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.93
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.70
corpora quadrigemina, adult.CNhs10501.16-22A416.18
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D511.82
cortex, neonate N30.CNhs11107.1392-42F211.25
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.93
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C617.83
eyeball, embryo E14.CNhs10521.399-16E220.92
eyeball, embryo E15.CNhs10593.426-16C917.83
eyeball, embryo E17.CNhs11023.1261-18D421.40
eyeball, neonate N00.CNhs11207.633-15C624.22
eyeball, neonate N01.CNhs11140.1532-43E723.96
eyeball, neonate N02.CNhs11205.1551-44G822.68
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H228.37
forelimb, embryo E13.CNhs10589.384-1E226.57
forelimb, embryo E14.CNhs10577.413-26A816.00
forelimb, embryo E15.CNhs11007.437-20E721.13
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B513.99
gonad, embryo E13.CNhs11044.1564-45I623.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.87
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.49
heart, embryo E11.CNhs10586.331-24E919.47
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I920.17
heart, embryo E14.CNhs10597.403-26D417.52
heart, embryo E15.CNhs11017.431-16C821.25
heart, embryo E16.CNhs11021.457-17C619.59
heart, embryo E17.CNhs11025.479-18E513.49
heart, embryo E18.CNhs11030.1283-20G311.54
heart, neonate N00.CNhs11213.639-21E315.41
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G117.89
heart, neonate N16.CNhs11209.782-15G112.65
heart, neonate N20.CNhs11127.821-26I610.67
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D213.55
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G111.73
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A38.73
intestine, embryo E12.CNhs11019.1251-16I521.12
intestine, embryo E13.CNhs11010.381-16D524.85
intestine, embryo E15.CNhs10602.976-16D821.13
intestine, embryo E16.CNhs10585.463-22H417.75
intestine, embryo E17.CNhs10582.482-18D315.57
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D112.34
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F818.85
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I217.31
kidney, embryo E18.CNhs11001.1288-20C714.93
kidney, neonate N00.CNhs11214.646-21G715.43
kidney, neonate N10.CNhs11206.758-6D516.82
kidney, neonate N20.CNhs11113.832-19I113.73
kidney, neonate N25.CNhs11122.1353-25F311.30
kidney, neonate N30.CNhs11203.1385-42H19.38
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F834.37
liver, embryo E13.CNhs10524.378-3H631.25
liver, embryo E14.CNhs10594.409-16E128.11
liver, embryo E15.CNhs10520.433-16D725.76
liver, embryo E16.CNhs10523.462-17F523.88
liver, embryo E17.CNhs10510.481-18A318.84
liver, embryo E18.CNhs10579.499-43G416.40
liver, neonate N00.CNhs11117.641-24F417.51
liver, neonate N03.CNhs11123.1345-25G213.73
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A311.37
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B114.97
lung, embryo E12.CNhs10522.354-16G222.93
lung, embryo E14.CNhs10604.404-26F828.52
lung, embryo E15.CNhs11020.432-17C524.95
lung, embryo E16.CNhs10998.458-17B623.00
lung, embryo E17.CNhs10605.480-44A621.27
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C613.27
lung, neonate N06.CNhs11212.683-20E521.75
lung, neonate N07.CNhs11111.715-19A317.05
lung, neonate N10.CNhs11219.750-23E619.93
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H212.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B618.69
mammary gland, adult pregnant day19.CNhs10476.588-5H211.87
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.10
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I715.33
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I416.61
oviduct, adult pregnant day01.CNhs10500.988-6G619.47
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F415.54
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E513.96
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D817.82
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E617.47
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B914.54
pituitary gland, embryo E16.CNhs11036.449-43F614.27
pituitary gland, embryo E17.CNhs11039.1265-44F512.01
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F88.60
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G416.31
skin, neonate N03.CNhs11215.662-22H317.55
skin, neonate N06.CNhs11097.693-20I516.35
skin, neonate N10.CNhs11108.762-6C418.71
small intestine, neonate N16.CNhs11114.790-21I112.83
spinal cord, adult.CNhs10505.24-13C911.68
spleen, adult.CNhs10465.25-2G224.95
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F223.70
spleen, neonate N10.CNhs11116.752-24D128.44
spleen, neonate N20.CNhs11112.824-19H130.76
spleen, neonate N25.CNhs11099.1354-25G327.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.77
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E319.45
stomach, embryo E15.CNhs10603.1252-16G822.16
stomach, embryo E16.CNhs11022.459-17D415.44
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C612.45
stomach, neonate N03.CNhs11193.1340-24B813.49
stomach, neonate N07.CNhs11210.718-18A912.89
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G510.71
testis, embryo E13.CNhs11031.389-23F524.97
testis, embryo E15.CNhs11034.443-27C519.86
testis, embryo E16.CNhs11033.470-26G522.75
testis, embryo E17.CNhs11029.486-18I519.63
testis, embryo E18.CNhs11027.503-18G522.98
testis, neonate N00.CNhs11189.1300-22B726.99
testis, neonate N07.CNhs11222.726-26I427.34
testis, neonate N10.CNhs11204.763-44D934.29
testis, neonate N20.CNhs11110.839-18H324.16
testis, neonate N30.CNhs11130.1391-42E219.87
thymus, adult.CNhs10471.38-12B525.28
thymus, embryo E14.CNhs11041.402-44I417.23
thymus, embryo E15.CNhs11005.430-45I217.36
thymus, embryo E16.CNhs11002.456-26C528.06
thymus, embryo E17.CNhs10581.478-18C129.90
thymus, embryo E18.CNhs10595.1273-19G429.01
thymus, neonate N02.CNhs11181.1541-43F825.72
thymus, neonate N03.CNhs11137.2104-43C730.72
thymus, neonate N06.CNhs11197.681-26C430.49
thymus, neonate N07.CNhs11211.713-19D330.41
thymus, neonate N10.CNhs11194.748-24E427.32
thymus, neonate N20.CNhs11186.820-7A228.94
thymus, neonate N25.CNhs11125.1362-25G729.73
thymus, neonate N30.CNhs11132.1393-42G224.78
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.80
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D511.79
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I820.86
whole body, embryo E12.CNhs10587.857-27C927.13
whole body, embryo E13.CNhs10512.372-23H219.81
whole body, embryo E14.5.CNhs10578.420-27D221.88
whole body, embryo E14.CNhs10519.395-14B115.51
whole body, embryo E16.CNhs10514.453-14F215.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.12
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.10
whole body, embryo E17.5.CNhs10513.490-9F914.28
whole body, embryo E17.CNhs10517.475-3I58.99
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C611.48
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell7.41e-0711
pro-T cell7.41e-0711

Uber anatomy
Ontology termp-valuen
primordium1.74e-13134
hemopoietic organ5.45e-1229
immune organ5.45e-1229
anterior region of body2.83e-1143
craniocervical region4.39e-1036
gland of gut4.73e-1024
thymus6.13e-1023
neck6.13e-1023
respiratory system epithelium6.13e-1023
hemolymphoid system gland6.13e-1023
pharyngeal epithelium6.13e-1023
thymic region6.13e-1023
pharyngeal gland6.13e-1023
entire pharyngeal arch endoderm6.13e-1023
thymus primordium6.13e-1023
early pharyngeal endoderm6.13e-1023
pharynx3.01e-0924
upper respiratory tract3.01e-0924
chordate pharynx3.01e-0924
pharyngeal arch system3.01e-0924
pharyngeal region of foregut3.01e-0924
mixed endoderm/mesoderm-derived structure4.82e-0935
respiratory system1.61e-0842
respiratory tract2.35e-0841
hematopoietic system1.91e-0745
blood island1.91e-0745
segment of respiratory tract2.91e-0727
foregut9.16e-0780
hemolymphoid system9.50e-0748
immune system9.50e-0748
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