FFCP PHASE1:Mm9::chr2:51790463..51790535,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71684 | |EntrezGene=71684 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1384 | |||
|TSSclassifier=NA | |||
|UniProt=Q99J64,A2AU66 | |UniProt=Q99J64,A2AU66 | ||
|association_with_transcript=0bp_to_ENSMUST00000039138,ENSMUST00000102767,NM_001141981,NM_030243,uc008jqk.2,uc008jql.2_5end | |association_with_transcript=0bp_to_ENSMUST00000039138,ENSMUST00000102767,NM_001141981,NM_030243,uc008jqk.2,uc008jql.2_5end | ||
|cluster_id=chr2:51790463..51790535,- | |||
|description=CAGE_peak_1_at_Rbm43_5end | |description=CAGE_peak_1_at_Rbm43_5end | ||
|id=chr2:51790463..51790535,- | |id=chr2:51790463..51790535,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.79e-15!131;UBERON:0009142!2.79e-15!131;UBERON:0000926!3.28e-15!193;UBERON:0004120!3.28e-15!193;UBERON:0006603!3.28e-15!193;UBERON:0002405!5.42e-10!70;UBERON:0005057!2.75e-09!51;UBERON:0005256!8.10e-09!47;UBERON:0009569!1.10e-08!66;UBERON:0000077!1.17e-08!97;UBERON:0001041!1.25e-08!92;UBERON:0002100!3.41e-08!98;UBERON:0001048!1.48e-07!147;UBERON:0002390!1.98e-07!45;UBERON:0003061!1.98e-07!45;UBERON:0003081!2.20e-07!88;UBERON:0002193!3.43e-07!48;UBERON:0002530!5.01e-07!65;UBERON:0000466!5.62e-07!79;UBERON:0004177!8.17e-07!29;UBERON:0000490!9.26e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.51e-11,90;UBERON:0000926,4.70e-10,120;UBERON:0004120,4.70e-10,120;UBERON:0006603,4.70e-10,120;UBERON:0001041,5.15e-10,80;UBERON:0005256,1.22e-09,45;UBERON:0009569,1.10e-08,66;UBERON:0003104,1.13e-08,61;UBERON:0009142,1.13e-08,61;UBERON:0001048,7.29e-08,134;UBERON:0005177,1.77e-07,79;UBERON:0002390,1.98e-07,45;UBERON:0003061,1.98e-07,45;UBERON:0002193,3.43e-07,48;UBERON:0002405,3.43e-07,48;UBERON:0002530,5.01e-07,65;UBERON:0003081,5.47e-07,87;UBERON:0004177,8.16e-07,29;UBERON:0005057,8.16e-07,29;UBERON:0000077,8.81e-07,35;UBERON:0000490,9.59e-07,66 | |||
|phase1_expression=4.96461426024861,1.39590163055744,1.36499771816861,0.60492842261366,0.500895729946347,3.52546471014969,2.80335168714631,18.2063886052623,1.40788722151667,0.234064526321993,2.05461561870606,1.43589886191606,16.0928686135333,16.5224560571905,19.6534759471241,24.7019826215588,26.5833513688696,19.4009231695316,18.2362196695633,16.9755860719212,5.86798702042381,13.2056965097177,12.7987896678078,3.83981814704176,2.98232065387321,2.29692785646008,2.15380998079537,1.50829862880122,1.71021077510736,1.00812051903972,1.77384408524244,8.25539875497521,7.38077745101484,0,5.48818077527422,6.81562045969819,6.12508068787107,28.4601508901097,22.6587249911902,26.1761871986899,34.1174263057988,37.5675016727145,36.8987868303677,11.0789199818508,9.63080846585388,8.25960384727567,4.69434806608824,2.8343270329458,3.73466510648602,5.24960727500565,7.97922603264566,2.87505128729943,8.55691290894455,2.90144856804538,4.7053131879945,9.00408026125814,12.8940047972441,10.8291139378263,0,0,1.90149421051854,3.38844532069132,9.78224275722253,3.1496490104849,2.96659908770092,2.8419204597844,1.49800055259202,2.30530983192933,1.14058573539325,0.945041568321835,0.630974884054146,1.71390590642282,1.98781686856452,0.734944795289724,1.15014565221884,0,7.70811166995721,3.70293280447044,5.83704826373725,0.131886287730194,0.182975287204819,0,4.4669279840221,4.50210088025344,4.73674568108111,0.589257170947335,2.98980529678116,0.372798891650601,1.66597625333005,4.6854367266207,10.1452571045587,5.16254326188832,4.0798280022465,3.2382191498269,4.54843492213368,2.68816132258401,8.00533194750986,10.0553890321054,10.3914401841148,9.54016851177919,1.69012103732017,10.2661181931454,17.8363667794652,7.11066703153331,6.061749148314,5.32055717497707,4.04419556011827,5.02409070763864,23.5633474118926,11.875371125186,4.68410382268567,4.87144765299426,5.5347719341454,7.53613202763113,6.93773372100658,11.9383261763192,1.48316980640624,7.51916655983541,18.5768215909474,7.117741397686,10.8212344045593,14.0613823409214,0,4.68449275218475,4.81727425670947,4.08731288333746,6.23038647430785,8.39863823390771,7.24300294316469,5.69204429738326,2.28750301409313,3.01570445070875,3.82413504423008,4.34716277461562,4.77912502486988,1.78465389374533,7.63795228877372,8.70848794270651,8.59257378674494,7.36546495602659,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,2.38127747029647,1.7935920839879,2.15513966487376,4.13925393182425,3.23351989399263,2.64748512234947,4.39877810409872,3.28793598641362,6.67313398141435,2.089512999133,5.35033554660653,5.17489093728082,2.1066395619397,6.43369767786788,6.25159698670304,3.52113813310353,3.28336483973535,2.70093092191522,4.02466050494857,4.52557733019029,5.09081472528348,4.88321283975857,4.56064782379353,4.67061369468678,4.60767579757745,5.08919138645195,3.89130285820108,5.4093995347373,4.83010253640311,4.96563749413376,4.41608891984667,1.9551876352064,2.97376904685418,4.49565963328025,2.98603550749328,3.25131340604614,2.70621668776396,2.42020229548011,2.66853652613844,3.42406127002606,2.84717436926707,2.63518327558417,3.51869292320377,4.37704238490532,5.45899443933536,4.49409704327111,5.83572734661674,3.78368419183298,2.65535061334314,3.19895835307241,4.50830942692322,3.66572390121566,4.46090720485539,3.85747009396752,6.13394410105296,5.75679577120448,6.90794402502049,5.30607804863742,5.03969466048153,9.67701613153345,11.7935397067922,12.5922782935518,11.5630269191447,13.0235666266305,13.7497959961967,12.9463261852865,8.59316701907687,7.13859674289012,4.31304619582064,7.44281895337007,6.24075346229121,8.5876818502018,6.99649912735457,6.27176577772377,14.2259956428286,3.41084541186873,3.42226450528254,4.41337223015489,8.21415869009757,6.03022526790537,9.75978927632656,5.65887578787617,10.4039195110086,8.858587585951,7.97273843287435,13.4367918066905,12.6060036762104,11.5719246865209,15.0791283939272,28.8270012423916,5.90117127622843,6.07060841870411,3.69266356971921,4.21962071731931,7.37707254195039,2.27223834483936,7.2566890465739,1.95219372148319,3.44677436372478,2.86762557543062,3.11918143715352,1.98153571552183,4.85772842009873,3.50707029493574,4.74345333535828,3.53453448063988,6.52924391958036,3.20518086601059,5.70104357737516,13.857490329693,2.65490276679926,1.94224508923985,3.93020624054176,5.09233715340925,4.13422650033082,4.61152721915891,5.42699415653264,6.18007340111759,5.70395805415554,3.47640433729398,5.27093042874994,5.15677716240934,12.9367050186439,1.62054984628179,2.19909762430683,2.7863814554107,3.3694644392032,4.10248280484762,7.89835298890181,3.04464949114599,3.52007562095566,2.33015277950202,13.6727606794076,8.90385765883992,4.52100394748536,4.52346936961169,3.22305328808468,4.43180429311665,3.49777003955821,5.37733375830478,22.7258271461144,9.49379592630823,14.0747840800981,31.080795405774,24.1948783066215,28.8260498240219,11.0485979496006,11.8958734475109,11.1941978781583,1.90934123603023,3.47969592939249,5.69294507955176,4.32021363287205,3.76358932826044,3.27543845619266,4.45052343069908,7.10819719237889,5.75863072364865,4.01806417204558,12.4267862617385,6.76431526421028,4.03694674318743,3.97100377097034,7.00024278038572,5.03723311563151,6.75824501963113,5.75050469364194,5.85919731797776,4.40409246587986,0.966336483304024,4.89651010638371,9.79634473947353,9.12263468805739,12.7361586884386,12.3424781828905,9.667441566044,4.96703386953162,10.2166132091974,9.15675068482379,11.1063094942962,8.07792150542998,10.4859232542314,10.4279932391535,9.90981968895393,7.24636793525727,5.66825959038028,7.32553646134413,8.25367480807176,5.54019234001459,8.113962949352,8.07034644440082,9.89018771043231,5.57357785605571,12.5393026008841,3.95326289831947,4.14292712856459,6.87474616127276,8.07709957015332,4.7955776383945,4.5323633843382,9.45031500324528,6.30449684513909,5.89085131679466,3.10656187051092,2.28332164685189,2.79317411380722,2.73173769206615,4.37592090722929,6.28839487883947,4.77993121970037,3.55594764482584,3.7086310303001,1.60459604795908,2.52697211763797,4.05566879824384,3.39527414494937,3.7456602987953,3.07320731543373,3.27382173046996,4.76293691283074,4.98302601562879,4.05109362973781,2.47251540481984,3.82717192349433,3.08582327146874,2.30718548007139,4.5302876089991,3.48831399917588,3.48204707536723,3.04612588410035,2.92684756596436,4.47218509444333,3.66671107383827,2.24456908663095,2.72860541685601,3.94017929502254,2.04615521584845,3.71848418846318,3.08650577569826,1.74867404556562,5.6143586026898,3.00819475667618,3.25190164517034,5.7353768971074,5.56482805489012 | |phase1_expression=4.96461426024861,1.39590163055744,1.36499771816861,0.60492842261366,0.500895729946347,3.52546471014969,2.80335168714631,18.2063886052623,1.40788722151667,0.234064526321993,2.05461561870606,1.43589886191606,16.0928686135333,16.5224560571905,19.6534759471241,24.7019826215588,26.5833513688696,19.4009231695316,18.2362196695633,16.9755860719212,5.86798702042381,13.2056965097177,12.7987896678078,3.83981814704176,2.98232065387321,2.29692785646008,2.15380998079537,1.50829862880122,1.71021077510736,1.00812051903972,1.77384408524244,8.25539875497521,7.38077745101484,0,5.48818077527422,6.81562045969819,6.12508068787107,28.4601508901097,22.6587249911902,26.1761871986899,34.1174263057988,37.5675016727145,36.8987868303677,11.0789199818508,9.63080846585388,8.25960384727567,4.69434806608824,2.8343270329458,3.73466510648602,5.24960727500565,7.97922603264566,2.87505128729943,8.55691290894455,2.90144856804538,4.7053131879945,9.00408026125814,12.8940047972441,10.8291139378263,0,0,1.90149421051854,3.38844532069132,9.78224275722253,3.1496490104849,2.96659908770092,2.8419204597844,1.49800055259202,2.30530983192933,1.14058573539325,0.945041568321835,0.630974884054146,1.71390590642282,1.98781686856452,0.734944795289724,1.15014565221884,0,7.70811166995721,3.70293280447044,5.83704826373725,0.131886287730194,0.182975287204819,0,4.4669279840221,4.50210088025344,4.73674568108111,0.589257170947335,2.98980529678116,0.372798891650601,1.66597625333005,4.6854367266207,10.1452571045587,5.16254326188832,4.0798280022465,3.2382191498269,4.54843492213368,2.68816132258401,8.00533194750986,10.0553890321054,10.3914401841148,9.54016851177919,1.69012103732017,10.2661181931454,17.8363667794652,7.11066703153331,6.061749148314,5.32055717497707,4.04419556011827,5.02409070763864,23.5633474118926,11.875371125186,4.68410382268567,4.87144765299426,5.5347719341454,7.53613202763113,6.93773372100658,11.9383261763192,1.48316980640624,7.51916655983541,18.5768215909474,7.117741397686,10.8212344045593,14.0613823409214,0,4.68449275218475,4.81727425670947,4.08731288333746,6.23038647430785,8.39863823390771,7.24300294316469,5.69204429738326,2.28750301409313,3.01570445070875,3.82413504423008,4.34716277461562,4.77912502486988,1.78465389374533,7.63795228877372,8.70848794270651,8.59257378674494,7.36546495602659,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,2.38127747029647,1.7935920839879,2.15513966487376,4.13925393182425,3.23351989399263,2.64748512234947,4.39877810409872,3.28793598641362,6.67313398141435,2.089512999133,5.35033554660653,5.17489093728082,2.1066395619397,6.43369767786788,6.25159698670304,3.52113813310353,3.28336483973535,2.70093092191522,4.02466050494857,4.52557733019029,5.09081472528348,4.88321283975857,4.56064782379353,4.67061369468678,4.60767579757745,5.08919138645195,3.89130285820108,5.4093995347373,4.83010253640311,4.96563749413376,4.41608891984667,1.9551876352064,2.97376904685418,4.49565963328025,2.98603550749328,3.25131340604614,2.70621668776396,2.42020229548011,2.66853652613844,3.42406127002606,2.84717436926707,2.63518327558417,3.51869292320377,4.37704238490532,5.45899443933536,4.49409704327111,5.83572734661674,3.78368419183298,2.65535061334314,3.19895835307241,4.50830942692322,3.66572390121566,4.46090720485539,3.85747009396752,6.13394410105296,5.75679577120448,6.90794402502049,5.30607804863742,5.03969466048153,9.67701613153345,11.7935397067922,12.5922782935518,11.5630269191447,13.0235666266305,13.7497959961967,12.9463261852865,8.59316701907687,7.13859674289012,4.31304619582064,7.44281895337007,6.24075346229121,8.5876818502018,6.99649912735457,6.27176577772377,14.2259956428286,3.41084541186873,3.42226450528254,4.41337223015489,8.21415869009757,6.03022526790537,9.75978927632656,5.65887578787617,10.4039195110086,8.858587585951,7.97273843287435,13.4367918066905,12.6060036762104,11.5719246865209,15.0791283939272,28.8270012423916,5.90117127622843,6.07060841870411,3.69266356971921,4.21962071731931,7.37707254195039,2.27223834483936,7.2566890465739,1.95219372148319,3.44677436372478,2.86762557543062,3.11918143715352,1.98153571552183,4.85772842009873,3.50707029493574,4.74345333535828,3.53453448063988,6.52924391958036,3.20518086601059,5.70104357737516,13.857490329693,2.65490276679926,1.94224508923985,3.93020624054176,5.09233715340925,4.13422650033082,4.61152721915891,5.42699415653264,6.18007340111759,5.70395805415554,3.47640433729398,5.27093042874994,5.15677716240934,12.9367050186439,1.62054984628179,2.19909762430683,2.7863814554107,3.3694644392032,4.10248280484762,7.89835298890181,3.04464949114599,3.52007562095566,2.33015277950202,13.6727606794076,8.90385765883992,4.52100394748536,4.52346936961169,3.22305328808468,4.43180429311665,3.49777003955821,5.37733375830478,22.7258271461144,9.49379592630823,14.0747840800981,31.080795405774,24.1948783066215,28.8260498240219,11.0485979496006,11.8958734475109,11.1941978781583,1.90934123603023,3.47969592939249,5.69294507955176,4.32021363287205,3.76358932826044,3.27543845619266,4.45052343069908,7.10819719237889,5.75863072364865,4.01806417204558,12.4267862617385,6.76431526421028,4.03694674318743,3.97100377097034,7.00024278038572,5.03723311563151,6.75824501963113,5.75050469364194,5.85919731797776,4.40409246587986,0.966336483304024,4.89651010638371,9.79634473947353,9.12263468805739,12.7361586884386,12.3424781828905,9.667441566044,4.96703386953162,10.2166132091974,9.15675068482379,11.1063094942962,8.07792150542998,10.4859232542314,10.4279932391535,9.90981968895393,7.24636793525727,5.66825959038028,7.32553646134413,8.25367480807176,5.54019234001459,8.113962949352,8.07034644440082,9.89018771043231,5.57357785605571,12.5393026008841,3.95326289831947,4.14292712856459,6.87474616127276,8.07709957015332,4.7955776383945,4.5323633843382,9.45031500324528,6.30449684513909,5.89085131679466,3.10656187051092,2.28332164685189,2.79317411380722,2.73173769206615,4.37592090722929,6.28839487883947,4.77993121970037,3.55594764482584,3.7086310303001,1.60459604795908,2.52697211763797,4.05566879824384,3.39527414494937,3.7456602987953,3.07320731543373,3.27382173046996,4.76293691283074,4.98302601562879,4.05109362973781,2.47251540481984,3.82717192349433,3.08582327146874,2.30718548007139,4.5302876089991,3.48831399917588,3.48204707536723,3.04612588410035,2.92684756596436,4.47218509444333,3.66671107383827,2.24456908663095,2.72860541685601,3.94017929502254,2.04615521584845,3.71848418846318,3.08650577569826,1.74867404556562,5.6143586026898,3.00819475667618,3.25190164517034,5.7353768971074,5.56482805489012 | ||
|short_description=p1@Rbm43 | |short_description=p1@Rbm43 | ||
}} | }} |
Latest revision as of 18:18, 26 September 2015
Short description: | p1@Rbm43 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbm43_5end |
Coexpression cluster: | MCL_coexpression_mm9:1384 |
Association with transcript: | 0bp_to_ENSMUST00000039138, ENSMUST00000102767, NM_001141981, NM_030243, uc008jqk.2, uc008jql.2_5end |
EntrezGene: | Rbm43 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 3.51e-11 | 90 |
mesoderm | 4.70e-10 | 120 |
mesoderm-derived structure | 4.70e-10 | 120 |
presumptive mesoderm | 4.70e-10 | 120 |
foregut | 5.15e-10 | 80 |
trunk mesenchyme | 1.22e-09 | 45 |
subdivision of trunk | 1.10e-08 | 66 |
mesenchyme | 1.13e-08 | 61 |
entire embryonic mesenchyme | 1.13e-08 | 61 |
primordium | 7.29e-08 | 134 |
trunk region element | 1.77e-07 | 79 |
hematopoietic system | 1.98e-07 | 45 |
blood island | 1.98e-07 | 45 |
hemolymphoid system | 3.43e-07 | 48 |
immune system | 3.43e-07 | 48 |
gland | 5.01e-07 | 65 |
lateral plate mesoderm | 5.47e-07 | 87 |
hemopoietic organ | 8.16e-07 | 29 |
immune organ | 8.16e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 8.81e-07 | 35 |
unilaminar epithelium | 9.59e-07 | 66 |