FFCP PHASE1:Mm9::chr2:51790463..51790535,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71684 | |EntrezGene=71684 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1384 | |MCL_coexpression_id=1384 | ||
|TSSclassifier=NA | |||
|UniProt=Q99J64,A2AU66 | |UniProt=Q99J64,A2AU66 | ||
|association_with_transcript=0bp_to_ENSMUST00000039138,ENSMUST00000102767,NM_001141981,NM_030243,uc008jqk.2,uc008jql.2_5end | |association_with_transcript=0bp_to_ENSMUST00000039138,ENSMUST00000102767,NM_001141981,NM_030243,uc008jqk.2,uc008jql.2_5end | ||
|cluster_id=chr2:51790463..51790535,- | |||
|description=CAGE_peak_1_at_Rbm43_5end | |description=CAGE_peak_1_at_Rbm43_5end | ||
|id=chr2:51790463..51790535,- | |id=chr2:51790463..51790535,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.79e-15!131;UBERON:0009142!2.79e-15!131;UBERON:0000926!3.28e-15!193;UBERON:0004120!3.28e-15!193;UBERON:0006603!3.28e-15!193;UBERON:0002405!5.42e-10!70;UBERON:0005057!2.75e-09!51;UBERON:0005256!8.10e-09!47;UBERON:0009569!1.10e-08!66;UBERON:0000077!1.17e-08!97;UBERON:0001041!1.25e-08!92;UBERON:0002100!3.41e-08!98;UBERON:0001048!1.48e-07!147;UBERON:0002390!1.98e-07!45;UBERON:0003061!1.98e-07!45;UBERON:0003081!2.20e-07!88;UBERON:0002193!3.43e-07!48;UBERON:0002530!5.01e-07!65;UBERON:0000466!5.62e-07!79;UBERON:0004177!8.17e-07!29;UBERON:0000490!9.26e-07!66 | |ontology_enrichment_uberon=UBERON:0003104!2.79e-15!131;UBERON:0009142!2.79e-15!131;UBERON:0000926!3.28e-15!193;UBERON:0004120!3.28e-15!193;UBERON:0006603!3.28e-15!193;UBERON:0002405!5.42e-10!70;UBERON:0005057!2.75e-09!51;UBERON:0005256!8.10e-09!47;UBERON:0009569!1.10e-08!66;UBERON:0000077!1.17e-08!97;UBERON:0001041!1.25e-08!92;UBERON:0002100!3.41e-08!98;UBERON:0001048!1.48e-07!147;UBERON:0002390!1.98e-07!45;UBERON:0003061!1.98e-07!45;UBERON:0003081!2.20e-07!88;UBERON:0002193!3.43e-07!48;UBERON:0002530!5.01e-07!65;UBERON:0000466!5.62e-07!79;UBERON:0004177!8.17e-07!29;UBERON:0000490!9.26e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.51e-11,90;UBERON:0000926,4.70e-10,120;UBERON:0004120,4.70e-10,120;UBERON:0006603,4.70e-10,120;UBERON:0001041,5.15e-10,80;UBERON:0005256,1.22e-09,45;UBERON:0009569,1.10e-08,66;UBERON:0003104,1.13e-08,61;UBERON:0009142,1.13e-08,61;UBERON:0001048,7.29e-08,134;UBERON:0005177,1.77e-07,79;UBERON:0002390,1.98e-07,45;UBERON:0003061,1.98e-07,45;UBERON:0002193,3.43e-07,48;UBERON:0002405,3.43e-07,48;UBERON:0002530,5.01e-07,65;UBERON:0003081,5.47e-07,87;UBERON:0004177,8.16e-07,29;UBERON:0005057,8.16e-07,29;UBERON:0000077,8.81e-07,35;UBERON:0000490,9.59e-07,66 | |||
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| ||
|short_description=p1@Rbm43 | |short_description=p1@Rbm43 | ||
}} | }} |
Latest revision as of 18:18, 26 September 2015
Short description: | p1@Rbm43 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbm43_5end |
Coexpression cluster: | MCL_coexpression_mm9:1384 |
Association with transcript: | 0bp_to_ENSMUST00000039138, ENSMUST00000102767, NM_001141981, NM_030243, uc008jqk.2, uc008jql.2_5end |
EntrezGene: | Rbm43 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 3.51e-11 | 90 |
mesoderm | 4.70e-10 | 120 |
mesoderm-derived structure | 4.70e-10 | 120 |
presumptive mesoderm | 4.70e-10 | 120 |
foregut | 5.15e-10 | 80 |
trunk mesenchyme | 1.22e-09 | 45 |
subdivision of trunk | 1.10e-08 | 66 |
mesenchyme | 1.13e-08 | 61 |
entire embryonic mesenchyme | 1.13e-08 | 61 |
primordium | 7.29e-08 | 134 |
trunk region element | 1.77e-07 | 79 |
hematopoietic system | 1.98e-07 | 45 |
blood island | 1.98e-07 | 45 |
hemolymphoid system | 3.43e-07 | 48 |
immune system | 3.43e-07 | 48 |
gland | 5.01e-07 | 65 |
lateral plate mesoderm | 5.47e-07 | 87 |
hemopoietic organ | 8.16e-07 | 29 |
immune organ | 8.16e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 8.81e-07 | 35 |
unilaminar epithelium | 9.59e-07 | 66 |