FFCP PHASE1:Mm9::chr1:169280315..169280365,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56752 | |EntrezGene=56752 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=369 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U367,Q3TMT4,Q3V1N7,Q9JLJ2 | |UniProt=Q3U367,Q3TMT4,Q3V1N7,Q9JLJ2 | ||
|association_with_transcript=193bp_to_ENSMUST00000028004,NM_019993,uc007dkx.1_5end | |association_with_transcript=193bp_to_ENSMUST00000028004,NM_019993,uc007dkx.1_5end | ||
|cluster_id=chr1:169280315..169280365,+ | |||
|description=CAGE_peak_1_at_Aldh9a1_5end | |description=CAGE_peak_1_at_Aldh9a1_5end | ||
|id=chr1:169280315..169280365,+ | |id=chr1:169280315..169280365,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.93e-10!66;CL:0000066!5.58e-07!25 | |ontology_enrichment_celltype=CL:0000063!1.93e-10!66;CL:0000066!5.58e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.58e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.99e-22!130;UBERON:0000925!2.99e-22!130;UBERON:0006595!2.99e-22!130;UBERON:0001007!1.50e-21!128;UBERON:0001555!1.50e-21!128;UBERON:0007026!1.50e-21!128;UBERON:0004921!2.05e-20!126;UBERON:0004185!2.05e-20!126;UBERON:0000160!1.87e-17!43;UBERON:0005409!2.90e-17!59;UBERON:0003929!1.18e-15!55;UBERON:0002405!2.94e-14!70;UBERON:0000490!2.07e-13!66;UBERON:0005057!4.82e-12!51;UBERON:0000949!1.55e-11!72;UBERON:0002365!1.74e-11!25;UBERON:0002330!1.74e-11!25;UBERON:0009854!5.54e-11!23;UBERON:0009856!5.54e-11!23;UBERON:0002107!1.12e-10!22;UBERON:0007499!1.12e-10!22;UBERON:0006925!1.12e-10!22;UBERON:0009497!1.12e-10!22;UBERON:0000015!1.12e-10!22;UBERON:0002423!1.12e-10!22;UBERON:0006235!1.12e-10!22;UBERON:0008835!1.12e-10!22;UBERON:0003894!1.12e-10!22;UBERON:0004161!1.12e-10!22;UBERON:0008836!1.12e-10!22;UBERON:0004923!2.71e-10!24;UBERON:0000344!1.46e-09!15;UBERON:0002530!3.97e-09!65;UBERON:0005911!5.11e-09!69;UBERON:0002368!7.24e-09!60;UBERON:0005172!1.45e-08!49;UBERON:0005173!1.45e-08!49;UBERON:0002417!1.45e-08!49;UBERON:0000916!1.45e-08!49;UBERON:0001242!1.55e-08!13;UBERON:0000060!1.55e-08!13;UBERON:0001262!1.55e-08!13;UBERON:0004786!1.55e-08!13;UBERON:0001041!3.62e-08!92;UBERON:0000077!6.29e-08!97;UBERON:0003104!3.77e-07!131;UBERON:0009142!3.77e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.36e-18,118;UBERON:0000925,1.36e-18,118;UBERON:0006595,1.36e-18,118;UBERON:0001007,5.87e-18,116;UBERON:0001555,5.87e-18,116;UBERON:0007026,5.87e-18,116;UBERON:0004921,6.49e-17,114;UBERON:0003929,1.18e-15,55;UBERON:0000160,3.53e-15,31;UBERON:0005409,1.77e-14,47;UBERON:0000490,2.07e-13,66;UBERON:0000949,1.55e-11,72;UBERON:0002365,1.74e-11,25;UBERON:0002330,1.74e-11,25;UBERON:0009854,5.54e-11,23;UBERON:0009856,5.54e-11,23;UBERON:0002107,1.12e-10,22;UBERON:0007499,1.12e-10,22;UBERON:0006925,1.12e-10,22;UBERON:0009497,1.12e-10,22;UBERON:0000015,1.12e-10,22;UBERON:0002423,1.12e-10,22;UBERON:0006235,1.12e-10,22;UBERON:0008835,1.12e-10,22;UBERON:0003894,1.12e-10,22;UBERON:0004161,1.12e-10,22;UBERON:0008836,1.12e-10,22;UBERON:0004923,2.71e-10,24;UBERON:0000344,1.46e-09,15;UBERON:0002530,3.97e-09,65;UBERON:0005911,5.11e-09,69;UBERON:0002368,7.24e-09,60;UBERON:0005172,1.45e-08,49;UBERON:0005173,1.45e-08,49;UBERON:0002417,1.45e-08,49;UBERON:0000916,1.45e-08,49;UBERON:0001242,1.55e-08,13;UBERON:0001262,1.55e-08,13;UBERON:0004786,1.55e-08,13 | |||
|phase1_expression=25.9441132309766,319.312497990015,285.284523097239,363.56198199081,438.283763703054,104.588786401107,108.629877876919,35.3797906229919,21.6814632113567,25.7470978954193,28.0797467889828,34.142484050004,31.8433357672043,30.1600388345541,42.9711592742205,38.4703008040669,41.2741508095607,27.6029394688458,23.7207970137928,28.434106670468,37.5891342467728,49.0497298932373,60.8595508693719,135.513582106015,129.386834521884,273.33441491875,207.627282148674,190.907512159698,341.282061343648,254.55043105753,121.508319839107,45.7222084890934,33.8285633171514,63.3926724061755,70.1909435995597,73.8081825391706,73.2967988981905,22.1821764290561,28.9094077473806,18.8468547830567,9.41170380849623,10.2456822743767,13.5942898848723,28.2008872265293,29.5006869848787,35.7916166715279,17.9950009200049,6.5407546914134,11.8630538676615,10.6936444490856,24.0776645195624,11.5002051491977,28.1874778176997,40.6202799526353,36.6342241065286,15.6928255981928,20.3438742356517,15.9858348606007,5.26022798234954,2.64495489636016,5.07065122804943,18.9752937958714,24.9002542911119,36.4459385498967,43.5101199529469,36.2344858622511,16.1784059679939,14.6002956022191,4.04389488003063,4.05017814995072,4.6271491497304,16.8534080798244,15.0190607847097,3.06226998037385,4.31304619582064,5.51531271966013,9.91042928994498,7.78892762319645,7.21950706304344,5.01167893374737,5.39777097254217,1.56274011167028,9.49222196604695,9.00420176050688,12.3766580699216,10.606629077052,11.2473627831291,6.52398060388552,5.6794644999888,12.0158780569789,20.0006497204158,193.595372320812,159.793263421321,257.438422411239,224.172864019446,289.873395951976,101.260426914993,32.8930522575651,25.4590284510811,25.4404493647445,19.2955485094052,39.7812079984385,43.3168907501298,28.4426681261332,16.2368280758411,15.7083116594561,10.6160133453104,123.775325615461,25.3759125974228,24.6413950847609,33.4826680658642,35.9269264408327,39.435250030786,23.8141772073144,25.1639833270408,33.4273132936937,65.5066664496091,28.1968745993828,45.9997487013935,17.794353494215,22.0841518460394,20.3647606316793,54.0536107532554,8.49064311333487,7.12118803165747,215.350297540843,50.3223522924865,49.1920239414594,49.5573885584952,11.2342979553617,8.23501085073528,10.6806199295935,7.47444576826789,7.41574826257959,9.55825004973976,6.32740925964255,17.0071737630028,22.8908825922571,12.3834151632501,85.8602772016814,18.4771029007039,17.9323641458109,17.8261508507296,17.0296444154358,12.9269348387523,11.914575986491,13.3056448874815,41.1338359475035,12.0718076042392,12.8592134514117,13.5482365606241,20.1660073833369,20.5754964426942,16.3678518265418,15.2278780941878,21.4957008163973,75.8390242298294,64.8516725929082,59.3901713736789,15.3273071676271,12.6644072389792,7.92273070428465,9.46978942340841,8.26409773339096,7.71335564436891,11.39416329277,9.92611585178591,14.478902453529,17.6079039407424,14.6109043030395,15.8084178614419,13.0117988808546,13.173006917463,14.8969124824013,8.41159794256509,10.3933658503077,160.91394731311,312.845020362973,19.6225190492415,18.8111704206955,32.8612026371338,102.858597557905,135.872984789216,135.25042016603,226.350362356732,192.038981208197,113.100843960121,119.174926752649,108.400032438231,194.144992269312,175.504096498252,162.698420248818,18.3977863924489,17.708519454508,21.4144697778853,17.3103628668517,21.3347735884388,25.2488951605147,46.0361990264593,98.6035788503742,101.892174369052,147.953199542239,207.516838961004,50.2203768205443,63.2919964264514,62.2868051306045,62.4809173876589,63.4295930148856,66.711973166732,59.8407965897686,56.5851941444873,106.529828316976,89.1362880469598,125.783640311954,123.254880880251,164.934007299464,221.735203113083,170.302563041269,20.8771104888263,16.1067700004912,16.9483575499707,13.9190970335654,14.0814148973101,14.573044397438,14.7587057349329,9.75668239288994,15.9211495547253,17.4957104822532,17.2211150150086,14.7476983244164,15.0235934223329,15.4774492682217,39.2057338242108,24.4757557718419,59.5034770353034,48.8408040959376,11.2385412991454,11.4867452860359,38.5247121635187,8.58401152494868,16.4064274096453,14.055794794679,15.0796378412959,15.0550342710108,14.2591151412732,12.1722908239198,13.3587531552715,12.5670018901864,15.4162233399144,9.63963949265421,41.3045647956062,27.9562997757591,25.5732526185114,24.2506080769627,29.2039304347918,25.734747432428,42.6276215320299,63.1827017182259,74.120775113074,51.034234558692,53.75308497899,38.1710415951381,47.0576539467832,54.6743591228962,42.1674434299995,30.9406629744561,25.8734100372879,16.0254373687866,14.746889951234,20.1476812929697,16.4926417287314,19.0854634834215,17.2776471632227,17.9634319977614,82.3697695303623,34.9522916925303,18.0833286405069,10.8824926941377,14.6932628293274,19.6017006016507,20.5320431685395,20.6817533678777,152.444477557412,11.3109434226411,39.8129152258997,31.9899645342995,26.4828174138688,42.3829028260555,37.7276068510029,32.2577224221197,38.5851036086052,38.066795032035,36.8993930057811,41.0508365746499,15.3422956886851,19.9253077784312,28.5134099769555,21.3270061934758,31.6625717431958,41.5382186865248,50.3359545367296,35.8605640518121,28.1264492043191,42.8724126029979,24.8024893021044,27.3615279260481,26.6388169635927,25.2786544847262,26.2194441659794,19.4299544314395,15.256441023948,25.1294462748824,29.2557570947733,23.9168279617746,20.7381604505663,36.9733011134969,38.9232413357115,38.7220308511399,37.9368803095161,35.8053391334963,32.7824235389087,36.0586348559907,37.8085189566918,31.6024988337702,35.7409923211949,29.4412460599574,35.0848370663109,33.3855090491943,26.4141798930346,14.0572837841431,33.2978930061097,35.8855426437903,36.5988463673691,17.9666322449937,38.0995425165899,23.8097111547445,14.5770497773765,17.5550236412377,5.64751842617067,5.9842280745933,5.72895513439397,6.18671456437275,7.53590771747707,3.0215755895588,7.42524750254986,4.5032120322422,4.53142408984205,3.10656187051092,12.2469070149328,17.5570944296454,21.8539015365292,23.0951381214879,26.6208716537538,27.2088392506021,23.5581531469712,21.427645952845,28.8827288632634,27.7966932940177,24.5874920893533,26.0304351112785,16.9491128520487,18.5032690450072,18.4942210037075,21.4332161077383,23.5245181668057,18.9051036054431,22.6647245441819,21.491042339622,24.3437169193645,24.8466128623072,20.5055123354696,21.3659232449523,21.2687199738647,23.6920902096694,23.9635644463332,17.0995312434598,20.5064211907251,33.6685362994643,22.8965584979656,20.2919233693661,24.5538625901814,19.3671051482457,24.3062329836238,15.2384452542147,27.8378614050036,31.3711738910516,11.2860115920618,17.8679049486808,14.6076736440866 | |phase1_expression=25.9441132309766,319.312497990015,285.284523097239,363.56198199081,438.283763703054,104.588786401107,108.629877876919,35.3797906229919,21.6814632113567,25.7470978954193,28.0797467889828,34.142484050004,31.8433357672043,30.1600388345541,42.9711592742205,38.4703008040669,41.2741508095607,27.6029394688458,23.7207970137928,28.434106670468,37.5891342467728,49.0497298932373,60.8595508693719,135.513582106015,129.386834521884,273.33441491875,207.627282148674,190.907512159698,341.282061343648,254.55043105753,121.508319839107,45.7222084890934,33.8285633171514,63.3926724061755,70.1909435995597,73.8081825391706,73.2967988981905,22.1821764290561,28.9094077473806,18.8468547830567,9.41170380849623,10.2456822743767,13.5942898848723,28.2008872265293,29.5006869848787,35.7916166715279,17.9950009200049,6.5407546914134,11.8630538676615,10.6936444490856,24.0776645195624,11.5002051491977,28.1874778176997,40.6202799526353,36.6342241065286,15.6928255981928,20.3438742356517,15.9858348606007,5.26022798234954,2.64495489636016,5.07065122804943,18.9752937958714,24.9002542911119,36.4459385498967,43.5101199529469,36.2344858622511,16.1784059679939,14.6002956022191,4.04389488003063,4.05017814995072,4.6271491497304,16.8534080798244,15.0190607847097,3.06226998037385,4.31304619582064,5.51531271966013,9.91042928994498,7.78892762319645,7.21950706304344,5.01167893374737,5.39777097254217,1.56274011167028,9.49222196604695,9.00420176050688,12.3766580699216,10.606629077052,11.2473627831291,6.52398060388552,5.6794644999888,12.0158780569789,20.0006497204158,193.595372320812,159.793263421321,257.438422411239,224.172864019446,289.873395951976,101.260426914993,32.8930522575651,25.4590284510811,25.4404493647445,19.2955485094052,39.7812079984385,43.3168907501298,28.4426681261332,16.2368280758411,15.7083116594561,10.6160133453104,123.775325615461,25.3759125974228,24.6413950847609,33.4826680658642,35.9269264408327,39.435250030786,23.8141772073144,25.1639833270408,33.4273132936937,65.5066664496091,28.1968745993828,45.9997487013935,17.794353494215,22.0841518460394,20.3647606316793,54.0536107532554,8.49064311333487,7.12118803165747,215.350297540843,50.3223522924865,49.1920239414594,49.5573885584952,11.2342979553617,8.23501085073528,10.6806199295935,7.47444576826789,7.41574826257959,9.55825004973976,6.32740925964255,17.0071737630028,22.8908825922571,12.3834151632501,85.8602772016814,18.4771029007039,17.9323641458109,17.8261508507296,17.0296444154358,12.9269348387523,11.914575986491,13.3056448874815,41.1338359475035,12.0718076042392,12.8592134514117,13.5482365606241,20.1660073833369,20.5754964426942,16.3678518265418,15.2278780941878,21.4957008163973,75.8390242298294,64.8516725929082,59.3901713736789,15.3273071676271,12.6644072389792,7.92273070428465,9.46978942340841,8.26409773339096,7.71335564436891,11.39416329277,9.92611585178591,14.478902453529,17.6079039407424,14.6109043030395,15.8084178614419,13.0117988808546,13.173006917463,14.8969124824013,8.41159794256509,10.3933658503077,160.91394731311,312.845020362973,19.6225190492415,18.8111704206955,32.8612026371338,102.858597557905,135.872984789216,135.25042016603,226.350362356732,192.038981208197,113.100843960121,119.174926752649,108.400032438231,194.144992269312,175.504096498252,162.698420248818,18.3977863924489,17.708519454508,21.4144697778853,17.3103628668517,21.3347735884388,25.2488951605147,46.0361990264593,98.6035788503742,101.892174369052,147.953199542239,207.516838961004,50.2203768205443,63.2919964264514,62.2868051306045,62.4809173876589,63.4295930148856,66.711973166732,59.8407965897686,56.5851941444873,106.529828316976,89.1362880469598,125.783640311954,123.254880880251,164.934007299464,221.735203113083,170.302563041269,20.8771104888263,16.1067700004912,16.9483575499707,13.9190970335654,14.0814148973101,14.573044397438,14.7587057349329,9.75668239288994,15.9211495547253,17.4957104822532,17.2211150150086,14.7476983244164,15.0235934223329,15.4774492682217,39.2057338242108,24.4757557718419,59.5034770353034,48.8408040959376,11.2385412991454,11.4867452860359,38.5247121635187,8.58401152494868,16.4064274096453,14.055794794679,15.0796378412959,15.0550342710108,14.2591151412732,12.1722908239198,13.3587531552715,12.5670018901864,15.4162233399144,9.63963949265421,41.3045647956062,27.9562997757591,25.5732526185114,24.2506080769627,29.2039304347918,25.734747432428,42.6276215320299,63.1827017182259,74.120775113074,51.034234558692,53.75308497899,38.1710415951381,47.0576539467832,54.6743591228962,42.1674434299995,30.9406629744561,25.8734100372879,16.0254373687866,14.746889951234,20.1476812929697,16.4926417287314,19.0854634834215,17.2776471632227,17.9634319977614,82.3697695303623,34.9522916925303,18.0833286405069,10.8824926941377,14.6932628293274,19.6017006016507,20.5320431685395,20.6817533678777,152.444477557412,11.3109434226411,39.8129152258997,31.9899645342995,26.4828174138688,42.3829028260555,37.7276068510029,32.2577224221197,38.5851036086052,38.066795032035,36.8993930057811,41.0508365746499,15.3422956886851,19.9253077784312,28.5134099769555,21.3270061934758,31.6625717431958,41.5382186865248,50.3359545367296,35.8605640518121,28.1264492043191,42.8724126029979,24.8024893021044,27.3615279260481,26.6388169635927,25.2786544847262,26.2194441659794,19.4299544314395,15.256441023948,25.1294462748824,29.2557570947733,23.9168279617746,20.7381604505663,36.9733011134969,38.9232413357115,38.7220308511399,37.9368803095161,35.8053391334963,32.7824235389087,36.0586348559907,37.8085189566918,31.6024988337702,35.7409923211949,29.4412460599574,35.0848370663109,33.3855090491943,26.4141798930346,14.0572837841431,33.2978930061097,35.8855426437903,36.5988463673691,17.9666322449937,38.0995425165899,23.8097111547445,14.5770497773765,17.5550236412377,5.64751842617067,5.9842280745933,5.72895513439397,6.18671456437275,7.53590771747707,3.0215755895588,7.42524750254986,4.5032120322422,4.53142408984205,3.10656187051092,12.2469070149328,17.5570944296454,21.8539015365292,23.0951381214879,26.6208716537538,27.2088392506021,23.5581531469712,21.427645952845,28.8827288632634,27.7966932940177,24.5874920893533,26.0304351112785,16.9491128520487,18.5032690450072,18.4942210037075,21.4332161077383,23.5245181668057,18.9051036054431,22.6647245441819,21.491042339622,24.3437169193645,24.8466128623072,20.5055123354696,21.3659232449523,21.2687199738647,23.6920902096694,23.9635644463332,17.0995312434598,20.5064211907251,33.6685362994643,22.8965584979656,20.2919233693661,24.5538625901814,19.3671051482457,24.3062329836238,15.2384452542147,27.8378614050036,31.3711738910516,11.2860115920618,17.8679049486808,14.6076736440866 | ||
|short_description=p1@Aldh9a1 | |short_description=p1@Aldh9a1 | ||
}} | }} |
Latest revision as of 17:50, 26 September 2015
Short description: | p1@Aldh9a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aldh9a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:369 |
Association with transcript: | 193bp_to_ENSMUST00000028004, NM_019993, uc007dkx.1_5end |
EntrezGene: | Aldh9a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.58e-07 | 25 |