FFCP PHASE1:Mm9::chr4:148178459..148178482,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69743 | |EntrezGene=69743 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=B1AS46,Q9CWL2 | |UniProt=B1AS46,Q9CWL2 | ||
|association_with_transcript=-18bp_to_NM_001159344,NM_027195,uc008vvk.1,uc008vvl.1,uc008vvn.2_5end | |association_with_transcript=-18bp_to_NM_001159344,NM_027195,uc008vvk.1,uc008vvl.1,uc008vvn.2_5end | ||
|cluster_id=chr4:148178459..148178482,+ | |||
|description=CAGE_peak_4_at_Casz1_5end | |description=CAGE_peak_4_at_Casz1_5end | ||
|id=chr4:148178459..148178482,+ | |id=chr4:148178459..148178482,+ | ||
|ontology_enrichment_celltype=CL:0000075!5.35e-07!7 | |ontology_enrichment_celltype=CL:0000075!5.35e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.57e-15,6;CL:0000677,7.57e-15,6;CL:0000584,7.57e-15,6;CL:0000075,1.33e-12,7;CL:0002563,1.30e-09,9;CL:0002251,1.30e-09,9;CL:0000682,6.96e-08,3;CL:0000066,8.14e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.12e-10!15;UBERON:0001242!2.40e-08!13;UBERON:0000060!2.40e-08!13;UBERON:0001262!2.40e-08!13;UBERON:0004786!2.40e-08!13 | |ontology_enrichment_uberon=UBERON:0000344!9.12e-10!15;UBERON:0001242!2.40e-08!13;UBERON:0000060!2.40e-08!13;UBERON:0001262!2.40e-08!13;UBERON:0004786!2.40e-08!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.72e-20,31;UBERON:0000344,2.44e-20,15;UBERON:0005409,9.11e-17,47;UBERON:0001242,1.10e-16,13;UBERON:0001262,1.10e-16,13;UBERON:0004786,1.10e-16,13;UBERON:0000014,5.74e-12,5;UBERON:0001003,5.74e-12,5;UBERON:0002097,5.74e-12,5;UBERON:0002199,5.74e-12,5;UBERON:0007029,5.74e-12,5;UBERON:0007376,5.74e-12,5;UBERON:0002416,5.74e-12,5;UBERON:0007383,5.74e-12,5;UBERON:0004923,1.14e-11,24;UBERON:0000485,4.76e-10,11;UBERON:0003350,1.30e-09,9;UBERON:0004808,1.30e-09,9;UBERON:0001277,1.30e-09,9;UBERON:0002108,1.38e-08,4;UBERON:0003102,5.23e-07,22;UBERON:0000331,8.64e-07,3;UBERON:0002116,8.64e-07,3;UBERON:0001204,8.64e-07,3;UBERON:0001168,8.64e-07,3 | |||
|phase1_expression=1.76163731815273,21.287499866001,11.3749809847384,25.4069937497737,25.5456822272637,3.52546471014969,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.67982572424835,2.2940928106717,9.76194338995534,2.58457197695445,6.24866574789078,1.90023419456374,2.01624103807945,2.21730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.569486723196412,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0.161766849947409,0.662524555381181,0,3.72783522436244,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,1.05220927943237,0,0.229902104433473,0.540186389416048,0.60281927134286,0.476255494059295,0.512454881139399,1.03071897015702,0.776110112217047,0,0,0,0.219195732427575,0,1.74126083261083,2.46938563689532,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.710234206755631,0.393528463494808,0.771335564436891,0.697601834251224,0.268273401399619,0.583826711835847,0.822799249567402,0,0.243206428637567,0.146199987425332,0.219550115291051,0,0,0,16.1905203662061,4.7601101999438,0,0,0.128867461322093,0,0,0,2.84717436926707,0,0,0,0,1.79763881730844,4.32276099749388,4.97853183135918,0.189667900953082,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0.441056796109924,6.92522262354216,3.22928853391811,5.12659861889325,4.41677672811605,4.26766339337159,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.836353184057875,2.62035076495413,1.61837215661785,0.743881101528023,1.83229159388821,0.90730481304255,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,7.48210265930198,0,0,0.503653849092235,0.579568782096571,0,0,4.28736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.936415074698824,0.640251524048693,0.287177344778066,0.952587382566147,0.347652977834566,0.578727661391115,0,0.735994600671987,1.02860775715625,0.70990322463735,0.476872379894642,0.872078499793971,0.470546902076653,0.338458431566706,0.365855945745545,0.789209134313529,0.679020569229309,1.68342681497322,0.474540072496697,0.788035859004508,0.409231043169689,0.464810523557898,1.15743966588685,0.999242311751784,0.701794825336225,0.644613162144895,0.57386499620653,0.661774257358546,0.231867835620421 | |phase1_expression=1.76163731815273,21.287499866001,11.3749809847384,25.4069937497737,25.5456822272637,3.52546471014969,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.67982572424835,2.2940928106717,9.76194338995534,2.58457197695445,6.24866574789078,1.90023419456374,2.01624103807945,2.21730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.569486723196412,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0.161766849947409,0.662524555381181,0,3.72783522436244,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,1.05220927943237,0,0.229902104433473,0.540186389416048,0.60281927134286,0.476255494059295,0.512454881139399,1.03071897015702,0.776110112217047,0,0,0,0.219195732427575,0,1.74126083261083,2.46938563689532,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.710234206755631,0.393528463494808,0.771335564436891,0.697601834251224,0.268273401399619,0.583826711835847,0.822799249567402,0,0.243206428637567,0.146199987425332,0.219550115291051,0,0,0,16.1905203662061,4.7601101999438,0,0,0.128867461322093,0,0,0,2.84717436926707,0,0,0,0,1.79763881730844,4.32276099749388,4.97853183135918,0.189667900953082,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0.441056796109924,6.92522262354216,3.22928853391811,5.12659861889325,4.41677672811605,4.26766339337159,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.836353184057875,2.62035076495413,1.61837215661785,0.743881101528023,1.83229159388821,0.90730481304255,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,7.48210265930198,0,0,0.503653849092235,0.579568782096571,0,0,4.28736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.936415074698824,0.640251524048693,0.287177344778066,0.952587382566147,0.347652977834566,0.578727661391115,0,0.735994600671987,1.02860775715625,0.70990322463735,0.476872379894642,0.872078499793971,0.470546902076653,0.338458431566706,0.365855945745545,0.789209134313529,0.679020569229309,1.68342681497322,0.474540072496697,0.788035859004508,0.409231043169689,0.464810523557898,1.15743966588685,0.999242311751784,0.701794825336225,0.644613162144895,0.57386499620653,0.661774257358546,0.231867835620421 | ||
|short_description=p4@Casz1 | |short_description=p4@Casz1 | ||
}} | }} |
Latest revision as of 17:25, 26 September 2015
Short description: | p4@Casz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Casz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -18bp_to_NM_001159344, NM_027195, uc008vvk.1, uc008vvl.1, uc008vvn.2_5end |
EntrezGene: | Casz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.57e-15 | 6 |
gut absorptive cell | 7.57e-15 | 6 |
enterocyte | 7.57e-15 | 6 |
columnar/cuboidal epithelial cell | 1.33e-12 | 7 |
intestinal epithelial cell | 1.30e-09 | 9 |
epithelial cell of alimentary canal | 1.30e-09 | 9 |
M cell of gut | 6.96e-08 | 3 |
epithelial cell | 8.14e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.72e-20 | 31 |
mucosa | 2.44e-20 | 15 |
gastrointestinal system | 9.11e-17 | 47 |
intestinal mucosa | 1.10e-16 | 13 |
wall of intestine | 1.10e-16 | 13 |
gastrointestinal system mucosa | 1.10e-16 | 13 |
zone of skin | 5.74e-12 | 5 |
skin epidermis | 5.74e-12 | 5 |
skin of body | 5.74e-12 | 5 |
integument | 5.74e-12 | 5 |
surface | 5.74e-12 | 5 |
outer epithelium | 5.74e-12 | 5 |
integumental system | 5.74e-12 | 5 |
enveloping layer of ectoderm | 5.74e-12 | 5 |
organ component layer | 1.14e-11 | 24 |
simple columnar epithelium | 4.76e-10 | 11 |
epithelium of mucosa | 1.30e-09 | 9 |
gastrointestinal system epithelium | 1.30e-09 | 9 |
intestinal epithelium | 1.30e-09 | 9 |
small intestine | 1.38e-08 | 4 |
surface structure | 5.23e-07 | 22 |
ileal mucosa | 8.64e-07 | 3 |
ileum | 8.64e-07 | 3 |
mucosa of small intestine | 8.64e-07 | 3 |
wall of small intestine | 8.64e-07 | 3 |