FFCP PHASE1:Mm9::chr7:3849731..3849744,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100038909,100041146,18722,18724,18727,18729,18730,18725 | |EntrezGene=100038909,100041146,18722,18724,18727,18729,18730,18725 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=193 | |MCL_coexpression_id=193 | ||
|TSSclassifier=NA | |||
|UniProt=E9Q1Z6,A2NTK4,A0PJG6,A2NTJ9 | |UniProt=E9Q1Z6,A2NTK4,A0PJG6,A2NTJ9 | ||
|association_with_transcript=-9bp_to_ENSMUST00000070639,NM_011094,uc009ewk.2,uc009ewl.2,uc009ewm.2,uc012ewh.1,uc012ewi.1_5end | |association_with_transcript=-9bp_to_ENSMUST00000070639,NM_011094,uc009ewk.2,uc009ewl.2,uc009ewm.2,uc012ewh.1,uc012ewi.1_5end | ||
|cluster_id=chr7:3849731..3849744,- | |||
|description=CAGE_peak_1_at_Gm14548_5end,CAGE_peak_1_at_Gm15448_5end,CAGE_peak_1_at_Pira11_5end,CAGE_peak_1_at_Pira1_5end,CAGE_peak_1_at_Pira2_5end,CAGE_peak_1_at_Pira4_5end,CAGE_peak_1_at_Pira7_5end,CAGE_peak_2_at_Pira6_5end | |description=CAGE_peak_1_at_Gm14548_5end,CAGE_peak_1_at_Gm15448_5end,CAGE_peak_1_at_Pira11_5end,CAGE_peak_1_at_Pira1_5end,CAGE_peak_1_at_Pira2_5end,CAGE_peak_1_at_Pira4_5end,CAGE_peak_1_at_Pira7_5end,CAGE_peak_2_at_Pira6_5end | ||
|id=chr7:3849731..3849744,- | |id=chr7:3849731..3849744,- | ||
Latest revision as of 17:09, 26 September 2015
| Short description: | p1@Gm14548, p1@Gm15448, p1@Pira11, p1@Pira1, p1@Pira2, p1@Pira4, p1@Pira7, p2@Pira6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gm14548_5end, CAGE_peak_1_at_Gm15448_5end, CAGE_peak_1_at_Pira11_5end, CAGE_peak_1_at_Pira1_5end, CAGE_peak_1_at_Pira2_5end, CAGE_peak_1_at_Pira4_5end, CAGE_peak_1_at_Pira7_5end, CAGE_peak_2_at_Pira6_5end |
| Coexpression cluster: | MCL_coexpression_mm9:193 |
| Association with transcript: | -9bp_to_ENSMUST00000070639, NM_011094, uc009ewk.2, uc009ewl.2, uc009ewm.2, uc012ewh.1, uc012ewi.1_5end |
| EntrezGene: | 100038909,100041146,18722,18724,18727,18729,18730,18725 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bone marrow macrophage | 1.08e-11 | 2 |
| myeloid lineage restricted progenitor cell | 1.38e-09 | 13 |
| megakaryocyte progenitor cell | 8.36e-08 | 6 |
| megakaryocyte | 8.36e-08 | 6 |
| myeloid cell | 9.35e-08 | 16 |
| bone marrow cell | 3.72e-07 | 3 |
| mesenchymal stem cell of the bone marrow | 3.72e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 1.04e-20 | 32 |
| bone element | 5.73e-17 | 22 |
| skeletal element | 5.73e-17 | 22 |
| skeletal system | 5.73e-17 | 22 |
| bone marrow | 1.96e-14 | 16 |
| hemolymphoid system | 9.87e-09 | 48 |
| immune system | 9.87e-09 | 48 |
| hematopoietic system | 1.25e-07 | 45 |
| blood island | 1.25e-07 | 45 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 3.26e-16 | 3 |
| muscle cancer | 3.26e-16 | 3 |
| organ system cancer | 2.33e-08 | 6 |
