FFCP PHASE1:Mm9::chr17:51966014..51966025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20230 | |EntrezGene=20230 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=D3YU76,Q60611 | |UniProt=D3YU76,Q60611 | ||
|association_with_transcript=-101bp_to_ENSMUST00000148559,ENSMUST00000169480,NM_001163631,uc012avi.1_5end | |association_with_transcript=-101bp_to_ENSMUST00000148559,ENSMUST00000169480,NM_001163631,uc012avi.1_5end | ||
|cluster_id=chr17:51966014..51966025,- | |||
|description=CAGE_peak_34_at_Satb1_5end | |description=CAGE_peak_34_at_Satb1_5end | ||
|id=chr17:51966014..51966025,- | |id=chr17:51966014..51966025,- | ||
|ontology_enrichment_celltype=CL:0000624!2.12e-16!8;CL:0000893!5.57e-16!6;CL:0002489!5.57e-16!6;CL:0000898!5.57e-16!6;CL:0000809!5.57e-16!6;CL:0000810!5.57e-16!6;CL:0000895!5.57e-16!6;CL:0000808!5.57e-16!6;CL:0000894!5.57e-16!6;CL:0000806!5.57e-16!6;CL:0000807!5.57e-16!6;CL:0000805!5.57e-16!6;CL:0002425!5.57e-16!6;CL:0002436!5.57e-16!6;CL:0002427!5.57e-16!6;CL:0002428!5.57e-16!6;CL:0002429!5.57e-16!6;CL:0002433!5.57e-16!6;CL:0002431!5.57e-16!6;CL:0002432!5.57e-16!6;CL:0000084!5.75e-15!11;CL:0000827!5.75e-15!11;CL:0000791!1.78e-14!9;CL:0000789!1.78e-14!9;CL:0002420!1.78e-14!9;CL:0002419!1.78e-14!9;CL:0000790!1.78e-14!9;CL:0000838!1.29e-13!12;CL:0000542!1.79e-12!13;CL:0000051!1.79e-12!13;CL:0000738!3.00e-09!17;CL:0002087!3.00e-09!17 | |ontology_enrichment_celltype=CL:0000624!2.12e-16!8;CL:0000893!5.57e-16!6;CL:0002489!5.57e-16!6;CL:0000898!5.57e-16!6;CL:0000809!5.57e-16!6;CL:0000810!5.57e-16!6;CL:0000895!5.57e-16!6;CL:0000808!5.57e-16!6;CL:0000894!5.57e-16!6;CL:0000806!5.57e-16!6;CL:0000807!5.57e-16!6;CL:0000805!5.57e-16!6;CL:0002425!5.57e-16!6;CL:0002436!5.57e-16!6;CL:0002427!5.57e-16!6;CL:0002428!5.57e-16!6;CL:0002429!5.57e-16!6;CL:0002433!5.57e-16!6;CL:0002431!5.57e-16!6;CL:0002432!5.57e-16!6;CL:0000084!5.75e-15!11;CL:0000827!5.75e-15!11;CL:0000791!1.78e-14!9;CL:0000789!1.78e-14!9;CL:0002420!1.78e-14!9;CL:0002419!1.78e-14!9;CL:0000790!1.78e-14!9;CL:0000838!1.29e-13!12;CL:0000542!1.79e-12!13;CL:0000051!1.79e-12!13;CL:0000738!3.00e-09!17;CL:0002087!3.00e-09!17 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.95e-30!23;UBERON:0000974!8.95e-30!23;UBERON:0004807!8.95e-30!23;UBERON:0005058!8.95e-30!23;UBERON:0003351!8.95e-30!23;UBERON:0009113!8.95e-30!23;UBERON:0003295!8.95e-30!23;UBERON:0009722!8.95e-30!23;UBERON:0005562!8.95e-30!23;UBERON:0007690!8.95e-30!23;UBERON:0006562!2.19e-28!24;UBERON:0003408!2.19e-28!24;UBERON:0001557!2.19e-28!24;UBERON:0001042!2.19e-28!24;UBERON:0008814!2.19e-28!24;UBERON:0009145!2.19e-28!24;UBERON:0000072!7.80e-25!27;UBERON:0000063!2.79e-23!35;UBERON:0004177!7.10e-23!29;UBERON:0000065!3.58e-17!41;UBERON:0001004!1.13e-16!42;UBERON:0002390!1.78e-13!45;UBERON:0003061!1.78e-13!45;UBERON:0007811!3.37e-13!86;UBERON:0002193!2.06e-12!48;UBERON:0000064!5.02e-12!99;UBERON:0000153!1.18e-11!94;UBERON:0005057!1.78e-11!51;UBERON:0003929!2.18e-10!55;UBERON:0002368!3.12e-09!60;UBERON:0005911!1.09e-08!69;UBERON:0002530!2.94e-08!65;UBERON:0000490!4.42e-08!66;UBERON:0002405!2.00e-07!70;UBERON:0000949!4.00e-07!72;UBERON:0002021!4.50e-07!10;UBERON:0000411!4.50e-07!10;UBERON:0001950!4.50e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.16e-20,23;UBERON:0000974,1.16e-20,23;UBERON:0004807,1.16e-20,23;UBERON:0005058,1.16e-20,23;UBERON:0003351,1.16e-20,23;UBERON:0009113,1.16e-20,23;UBERON:0003295,1.16e-20,23;UBERON:0009722,1.16e-20,23;UBERON:0005562,1.16e-20,23;UBERON:0007690,1.16e-20,23;UBERON:0006562,8.43e-20,24;UBERON:0003408,8.43e-20,24;UBERON:0001557,8.43e-20,24;UBERON:0001042,8.43e-20,24;UBERON:0008814,8.43e-20,24;UBERON:0009145,8.43e-20,24;UBERON:0000072,1.35e-17,27;UBERON:0004177,2.23e-16,29;UBERON:0005057,2.23e-16,29;UBERON:0000077,1.49e-13,35;UBERON:0007811,3.58e-13,36;UBERON:0000065,1.51e-11,41;UBERON:0001004,2.87e-11,42;UBERON:0000153,5.29e-11,43;UBERON:0002390,1.66e-10,45;UBERON:0003061,1.66e-10,45;UBERON:0002193,7.76e-10,48;UBERON:0002405,7.76e-10,48;UBERON:0003929,1.48e-08,55;UBERON:0002368,8.02e-08,60;UBERON:0002530,3.37e-07,65;UBERON:0000490,4.37e-07,66;UBERON:0005911,9.16e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0.468129052643987,0.171217968225505,0.638177271962691,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.79472541912506,0.721172697119813,1.47689527174577,1.51449674922221,1.447929326445,2.62148081355785,2.14407337627455,1.73181314952593,3.3894301632655,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0.468129052643987,0.171217968225505,0.638177271962691,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.79472541912506,0.721172697119813,1.47689527174577,1.51449674922221,1.447929326445,2.62148081355785,2.14407337627455,1.73181314952593,3.3894301632655,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p34@Satb1 | |short_description=p34@Satb1 | ||
}} | }} |
Latest revision as of 16:01, 26 September 2015
Short description: | p34@Satb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_Satb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -101bp_to_ENSMUST00000148559, ENSMUST00000169480, NM_001163631, uc012avi.1_5end |
EntrezGene: | Satb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.16e-20 | 23 |
neck | 1.16e-20 | 23 |
respiratory system epithelium | 1.16e-20 | 23 |
hemolymphoid system gland | 1.16e-20 | 23 |
pharyngeal epithelium | 1.16e-20 | 23 |
thymic region | 1.16e-20 | 23 |
pharyngeal gland | 1.16e-20 | 23 |
entire pharyngeal arch endoderm | 1.16e-20 | 23 |
thymus primordium | 1.16e-20 | 23 |
early pharyngeal endoderm | 1.16e-20 | 23 |
pharynx | 8.43e-20 | 24 |
gland of gut | 8.43e-20 | 24 |
upper respiratory tract | 8.43e-20 | 24 |
chordate pharynx | 8.43e-20 | 24 |
pharyngeal arch system | 8.43e-20 | 24 |
pharyngeal region of foregut | 8.43e-20 | 24 |
segment of respiratory tract | 1.35e-17 | 27 |
hemopoietic organ | 2.23e-16 | 29 |
immune organ | 2.23e-16 | 29 |
mixed endoderm/mesoderm-derived structure | 1.49e-13 | 35 |
craniocervical region | 3.58e-13 | 36 |
respiratory tract | 1.51e-11 | 41 |
respiratory system | 2.87e-11 | 42 |
anterior region of body | 5.29e-11 | 43 |
hematopoietic system | 1.66e-10 | 45 |
blood island | 1.66e-10 | 45 |
hemolymphoid system | 7.76e-10 | 48 |
immune system | 7.76e-10 | 48 |
gut epithelium | 1.48e-08 | 55 |
endocrine gland | 8.02e-08 | 60 |
gland | 3.37e-07 | 65 |
unilaminar epithelium | 4.37e-07 | 66 |
endo-epithelium | 9.16e-07 | 69 |