Personal tools

FFCP PHASE1:Mm9::chr1:162239217..162239246,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr1:162239217..162239246,- |short_description=p2@Rabgap1l |description=CAGE_peak_2_at_Rabgap1l_5end |association_with_transcript=0bp_to_ENSMUST00000086099,uc00...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:162239217..162239246,-
|DHSsupport=NA
|short_description=p2@Rabgap1l
|DPIdataset=NA
|description=CAGE_peak_2_at_Rabgap1l_5end
|association_with_transcript=0bp_to_ENSMUST00000086099,uc007dei.2_5end
|EntrezGene=29809
|EntrezGene=29809
|HGNC=
|HGNC=
|MCL_coexpression_id=701
|TSSclassifier=NA
|UniProt=A6H6A9
|UniProt=A6H6A9
|association_with_transcript=0bp_to_ENSMUST00000086099,uc007dei.2_5end
|cluster_id=chr1:162239217..162239246,-
|description=CAGE_peak_2_at_Rabgap1l_5end
|id=chr1:162239217..162239246,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!1.41e-19!128;UBERON:0001555!1.41e-19!128;UBERON:0007026!1.41e-19!128;UBERON:0004119!5.84e-19!130;UBERON:0000925!5.84e-19!130;UBERON:0006595!5.84e-19!130;UBERON:0004921!6.74e-19!126;UBERON:0004185!6.74e-19!126;UBERON:0000077!5.05e-12!97;UBERON:0001041!7.75e-12!92;UBERON:0005409!2.27e-11!59;UBERON:0001004!4.20e-11!42;UBERON:0000065!1.50e-10!41;UBERON:0003104!5.76e-10!131;UBERON:0009142!5.76e-10!131;UBERON:0000160!6.98e-09!43;UBERON:0003408!1.54e-07!24;UBERON:0004177!2.38e-07!29;UBERON:0005911!3.99e-07!69;UBERON:0002370!5.36e-07!23;UBERON:0000974!5.36e-07!23;UBERON:0004807!5.36e-07!23;UBERON:0005058!5.36e-07!23;UBERON:0003351!5.36e-07!23;UBERON:0009113!5.36e-07!23;UBERON:0003295!5.36e-07!23;UBERON:0009722!5.36e-07!23;UBERON:0005562!5.36e-07!23;UBERON:0007690!5.36e-07!23;UBERON:0000072!8.40e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.91e-16,116;UBERON:0001555,8.91e-16,116;UBERON:0007026,8.91e-16,116;UBERON:0004921,3.89e-15,114;UBERON:0004119,6.88e-15,118;UBERON:0000925,6.88e-15,118;UBERON:0006595,6.88e-15,118;UBERON:0001004,1.01e-11,42;UBERON:0000065,3.98e-11,41;UBERON:0001041,9.73e-09,80;UBERON:0003408,1.49e-08,24;UBERON:0004177,2.70e-08,29;UBERON:0005057,2.70e-08,29;UBERON:0005409,4.05e-08,47;UBERON:0002370,5.91e-08,23;UBERON:0000974,5.91e-08,23;UBERON:0004807,5.91e-08,23;UBERON:0005058,5.91e-08,23;UBERON:0003351,5.91e-08,23;UBERON:0009113,5.91e-08,23;UBERON:0003295,5.91e-08,23;UBERON:0009722,5.91e-08,23;UBERON:0005562,5.91e-08,23;UBERON:0007690,5.91e-08,23;UBERON:0002193,7.30e-08,48;UBERON:0002405,7.30e-08,48;UBERON:0000077,9.87e-08,35;UBERON:0005911,1.43e-07,69;UBERON:0000072,2.35e-07,27;UBERON:0006562,3.13e-07,24;UBERON:0001557,3.13e-07,24;UBERON:0001042,3.13e-07,24;UBERON:0008814,3.13e-07,24;UBERON:0009145,3.13e-07,24;UBERON:0002390,6.88e-07,45;UBERON:0003061,6.88e-07,45
|phase1_expression=29.6275367143869,4.53668029931169,1.81999695755814,1.20985684522732,1.50268718983904,12.5909453933917,12.6150825921584,5.55230290798778,2.956563165185,2.57470978954193,2.73948749160808,1.19658238493005,24.8241058400248,14.2495255942966,3.33109761815663,4.25198061518635,0,24.9215110633008,27.4228867211478,19.5219239827094,7.14363637268986,86.581709447172,94.2931238791557,9.5995453676044,7.57050627521661,1.14846392823004,5.59990595006797,10.1271479362368,8.36103045608045,8.56902441183765,7.76056787293567,0,0,0,16.7533939455739,12.9663023379624,10.4126371693808,23.0192396905299,11.720030167857,24.6056159667685,41.764435650202,17.0761371239611,18.4493934151838,0,0,0,0,0,0,0,0,0,19.4627823026974,5.07753499407941,15.1242209614109,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0,0,0,0,2.31891590961342,0,0.679971333707751,0,0,0,4.49422144421606,0,0,0,96.3368991272495,0,0,0,3.46385665617943,1.77351905832569,5.56076889516262,6.05174562511018,28.2242293175417,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,1.3013942122792,11.4999371753484,0.647067399789637,2.87093973998512,2.42437626567611,5.59175283654366,1.46390398505774,0.83778682725382,6.13096932500619,15.2165208122519,13.197860081855,13.9777249780371,0,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.486723789203273,1.01839363850316,3.85661608891288,4.54900965180614,18.7293251738962,0,0.229902104433473,0,0.753524089178575,0.272145996605311,0.640568601424249,0.0937017245597288,6.46758426847539,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.823128545631774,1.19420560091096,16.1509033082044,14.1541348913093,18.7547909601091,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,1.16765342367169,0,0.656669856316381,0.56748166682099,0.584799949701329,1.09775057645525,0.805238512562231,3.15434922846191,0.92614151141356,1.65209391491899,9.52022039988759,0.853153002140936,1.39342003116263,3.8660238396628,6.05050573870028,4.66993892074228,4.94586627892654,3.32170343081158,3.29397909448022,5.02670417600539,5.37182474511107,5.26403035221624,6.29173586057955,8.21324589523838,6.37252074413975,0.189667900953082,0.799739588268102,5.63538678365402,0.610953983535943,0.969762435838129,0.98190147846446,2.02356918797623,1.77132177575523,1.41298855057237,1.48076596706161,0.296452627087149,1.16791574001266,0.393117990226406,2.9232074610031,1.21716072833102,2.17059443777175,2.03700681425136,3.45235364940973,2.10775794807546,1.09824565275233,0,1.86070473834252,1.24815069245824,0,0.358794827043824,0.482443521363367,27.5282253348241,0.568474235311454,2.77040459951444,3.73439188705414,5.16318546234705,11.5579317634853,15.2347930167049,10.7323506321789,15.9211495547253,11.5161638617363,11.6401981119966,17.6972379892997,17.4411831684555,16.9239398540369,0,0,18.6870423747234,17.9358885098076,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,7.38088443082997,0.534196811001766,3.4206261464251,16.8269525431986,13.2745138339963,5.58395463156457,7.86041248108353,17.3516673375426,10.6308681437078,11.9899707698132,10.3371317267288,11.6330793432802,13.1904030002347,15.485801138855,11.5960469432499,5.15677716240934,2.04263763452273,0.36012218806262,0.517434735131018,1.50035924522115,2.83744373827638,2.49716344642899,2.13913726782757,0.913394847343798,0.469343416127421,0.21183207086382,15.4369878638473,1.15420377059036,1.13025098687134,0.482503399425247,0,0.984845398470368,4.95517422270746,0.18542530201051,5.80960994712699,2.27025554759545,1.29636169158798,6.78126445216888,3.96413260390973,4.57556346413045,18.6976272993241,19.4532518729885,14.2345973018557,14.3200592702267,0,4.47302827679067,8.3164112432787,9.82714991268003,13.538478952263,10.9240120571705,13.8857805618564,15.9671124610258,4.14767914533737,34.1736622197809,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0,0,0.288030006257865,69.5224465381992,9.93353554921804,22.8018324905917,35.7282263188936,37.5956060901711,43.9085794066595,32.2123804713517,36.9223817936443,48.7667953249553,45.0382227331049,47.388307014315,50.5806401039315,62.2490615412932,80.7619394074641,0.906921534460845,0,0,0,6.18206700903009,17.6421526924111,36.630324853453,3.00115730710692,32.6021867622986,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,1.04806581313991,0.735374033800057,4.00044110042907,2.06035057238894,1.28367683836726,2.27427490587418,2.5347929989024,2.45214243801899,1.68554713445788,2.43295579138503,1.78049953762401,0.952587382566147,2.0859178670074,2.70072908649187,2.06042950401653,2.64958056241915,1.37147700954166,2.8396128985494,1.1921809497366,2.18019624948493,2.1645157495526,1.60767754994185,1.09756783723664,2.10455769150274,1.62964936615034,2.80571135828869,1.42362021749009,1.0835493061312,2.86461730218783,1.70430525304563,0.964533054905707,1.24905288968973,1.87145286756327,2.79332370262788,0.57386499620653,1.32354851471709,2.31867835620421
|phase1_expression=29.6275367143869,4.53668029931169,1.81999695755814,1.20985684522732,1.50268718983904,12.5909453933917,12.6150825921584,5.55230290798778,2.956563165185,2.57470978954193,2.73948749160808,1.19658238493005,24.8241058400248,14.2495255942966,3.33109761815663,4.25198061518635,0,24.9215110633008,27.4228867211478,19.5219239827094,7.14363637268986,86.581709447172,94.2931238791557,9.5995453676044,7.57050627521661,1.14846392823004,5.59990595006797,10.1271479362368,8.36103045608045,8.56902441183765,7.76056787293567,0,0,0,16.7533939455739,12.9663023379624,10.4126371693808,23.0192396905299,11.720030167857,24.6056159667685,41.764435650202,17.0761371239611,18.4493934151838,0,0,0,0,0,0,0,0,0,19.4627823026974,5.07753499407941,15.1242209614109,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0,0,0,0,2.31891590961342,0,0.679971333707751,0,0,0,4.49422144421606,0,0,0,96.3368991272495,0,0,0,3.46385665617943,1.77351905832569,5.56076889516262,6.05174562511018,28.2242293175417,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,1.3013942122792,11.4999371753484,0.647067399789637,2.87093973998512,2.42437626567611,5.59175283654366,1.46390398505774,0.83778682725382,6.13096932500619,15.2165208122519,13.197860081855,13.9777249780371,0,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.486723789203273,1.01839363850316,3.85661608891288,4.54900965180614,18.7293251738962,0,0.229902104433473,0,0.753524089178575,0.272145996605311,0.640568601424249,0.0937017245597288,6.46758426847539,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.823128545631774,1.19420560091096,16.1509033082044,14.1541348913093,18.7547909601091,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,1.16765342367169,0,0.656669856316381,0.56748166682099,0.584799949701329,1.09775057645525,0.805238512562231,3.15434922846191,0.92614151141356,1.65209391491899,9.52022039988759,0.853153002140936,1.39342003116263,3.8660238396628,6.05050573870028,4.66993892074228,4.94586627892654,3.32170343081158,3.29397909448022,5.02670417600539,5.37182474511107,5.26403035221624,6.29173586057955,8.21324589523838,6.37252074413975,0.189667900953082,0.799739588268102,5.63538678365402,0.610953983535943,0.969762435838129,0.98190147846446,2.02356918797623,1.77132177575523,1.41298855057237,1.48076596706161,0.296452627087149,1.16791574001266,0.393117990226406,2.9232074610031,1.21716072833102,2.17059443777175,2.03700681425136,3.45235364940973,2.10775794807546,1.09824565275233,0,1.86070473834252,1.24815069245824,0,0.358794827043824,0.482443521363367,27.5282253348241,0.568474235311454,2.77040459951444,3.73439188705414,5.16318546234705,11.5579317634853,15.2347930167049,10.7323506321789,15.9211495547253,11.5161638617363,11.6401981119966,17.6972379892997,17.4411831684555,16.9239398540369,0,0,18.6870423747234,17.9358885098076,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,7.38088443082997,0.534196811001766,3.4206261464251,16.8269525431986,13.2745138339963,5.58395463156457,7.86041248108353,17.3516673375426,10.6308681437078,11.9899707698132,10.3371317267288,11.6330793432802,13.1904030002347,15.485801138855,11.5960469432499,5.15677716240934,2.04263763452273,0.36012218806262,0.517434735131018,1.50035924522115,2.83744373827638,2.49716344642899,2.13913726782757,0.913394847343798,0.469343416127421,0.21183207086382,15.4369878638473,1.15420377059036,1.13025098687134,0.482503399425247,0,0.984845398470368,4.95517422270746,0.18542530201051,5.80960994712699,2.27025554759545,1.29636169158798,6.78126445216888,3.96413260390973,4.57556346413045,18.6976272993241,19.4532518729885,14.2345973018557,14.3200592702267,0,4.47302827679067,8.3164112432787,9.82714991268003,13.538478952263,10.9240120571705,13.8857805618564,15.9671124610258,4.14767914533737,34.1736622197809,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0,0,0.288030006257865,69.5224465381992,9.93353554921804,22.8018324905917,35.7282263188936,37.5956060901711,43.9085794066595,32.2123804713517,36.9223817936443,48.7667953249553,45.0382227331049,47.388307014315,50.5806401039315,62.2490615412932,80.7619394074641,0.906921534460845,0,0,0,6.18206700903009,17.6421526924111,36.630324853453,3.00115730710692,32.6021867622986,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,1.04806581313991,0.735374033800057,4.00044110042907,2.06035057238894,1.28367683836726,2.27427490587418,2.5347929989024,2.45214243801899,1.68554713445788,2.43295579138503,1.78049953762401,0.952587382566147,2.0859178670074,2.70072908649187,2.06042950401653,2.64958056241915,1.37147700954166,2.8396128985494,1.1921809497366,2.18019624948493,2.1645157495526,1.60767754994185,1.09756783723664,2.10455769150274,1.62964936615034,2.80571135828869,1.42362021749009,1.0835493061312,2.86461730218783,1.70430525304563,0.964533054905707,1.24905288968973,1.87145286756327,2.79332370262788,0.57386499620653,1.32354851471709,2.31867835620421
|short_description=p2@Rabgap1l
}}
}}

Latest revision as of 15:40, 26 September 2015

Short description:p2@Rabgap1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rabgap1l_5end
Coexpression cluster:MCL_coexpression_mm9:701
Association with transcript: 0bp_to_ENSMUST00000086099, uc007dei.2_5end
EntrezGene:Rabgap1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rabgap1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.25
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.92
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.42
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H286.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I994.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.57
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I210.13
Ileum epithelium, pool1.CNhs13199.10252-104B98.36
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.46
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G696.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H928.22
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.98
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G418.73
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.75
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A39.52
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E38.21
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B127.53
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A611.56
lung, embryo E18.CNhs10583.1287-20I615.23
lung, neonate N00.CNhs11224.640-42C610.73
lung, neonate N06.CNhs11212.683-20E515.92
lung, neonate N07.CNhs11111.715-19A311.52
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A417.70
lung, neonate N25.CNhs11119.1359-25C717.44
lung, neonate N30.CNhs11133.1394-42H216.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B618.69
mammary gland, adult pregnant day19.CNhs10476.588-5H217.94
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I77.38
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G616.83
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E517.35
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B615.49
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F815.44
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.23
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D48.32
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B810.92
stomach, neonate N07.CNhs11210.718-18A913.89
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C134.17
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B569.52
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I222.80
thymus, embryo E16.CNhs11002.456-26C535.73
thymus, embryo E17.CNhs10581.478-18C137.60
thymus, embryo E18.CNhs10595.1273-19G443.91
thymus, neonate N02.CNhs11181.1541-43F832.21
thymus, neonate N03.CNhs11137.2104-43C736.92
thymus, neonate N06.CNhs11197.681-26C448.77
thymus, neonate N07.CNhs11211.713-19D345.04
thymus, neonate N10.CNhs11194.748-24E447.39
thymus, neonate N20.CNhs11186.820-7A250.58
thymus, neonate N25.CNhs11125.1362-25G762.25
thymus, neonate N30.CNhs11132.1393-42G280.76
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F517.64
uterus, adult.CNhs10509.92-27E536.63
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F832.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system8.91e-16116
digestive tract8.91e-16116
primitive gut8.91e-16116
subdivision of digestive tract3.89e-15114
endoderm-derived structure6.88e-15118
endoderm6.88e-15118
presumptive endoderm6.88e-15118
respiratory system1.01e-1142
respiratory tract3.98e-1141
foregut9.73e-0980
gland of gut1.49e-0824
hemopoietic organ2.70e-0829
immune organ2.70e-0829
gastrointestinal system4.05e-0847
thymus5.91e-0823
neck5.91e-0823
respiratory system epithelium5.91e-0823
hemolymphoid system gland5.91e-0823
pharyngeal epithelium5.91e-0823
thymic region5.91e-0823
pharyngeal gland5.91e-0823
entire pharyngeal arch endoderm5.91e-0823
thymus primordium5.91e-0823
early pharyngeal endoderm5.91e-0823
hemolymphoid system7.30e-0848
immune system7.30e-0848
mixed endoderm/mesoderm-derived structure9.87e-0835
endo-epithelium1.43e-0769
segment of respiratory tract2.35e-0727
pharynx3.13e-0724
upper respiratory tract3.13e-0724
chordate pharynx3.13e-0724
pharyngeal arch system3.13e-0724
pharyngeal region of foregut3.13e-0724
hematopoietic system6.88e-0745
blood island6.88e-0745
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:162239217..162239246,-&oldid=4261180"