FFCP PHASE1:Mm9::chr17:50233602..50233613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76438 | |EntrezGene=76438 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |MCL_coexpression_id=18 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z731 | |UniProt=D3Z731 | ||
|association_with_transcript=43bp_to_ENSMUST00000113195_5end | |association_with_transcript=43bp_to_ENSMUST00000113195_5end | ||
|cluster_id=chr17:50233602..50233613,- | |||
|description=CAGE_peak_7_at_Rftn1_5end | |description=CAGE_peak_7_at_Rftn1_5end | ||
|id=chr17:50233602..50233613,- | |id=chr17:50233602..50233613,- | ||
|ontology_enrichment_celltype=CL:0000553!1.78e-10!6;CL:0000556!1.78e-10!6;CL:0002031!1.81e-07!25;CL:0000050!7.94e-07!9 | |ontology_enrichment_celltype=CL:0000553!1.78e-10!6;CL:0000556!1.78e-10!6;CL:0002031!1.81e-07!25;CL:0000050!7.94e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.52e-11,6;CL:0000556,2.52e-11,6;CL:0000945,2.54e-08,1;CL:0000236,2.54e-08,1;CL:0000826,2.54e-08,1;CL:0000050,1.01e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.28e-25!48;UBERON:0002390!3.03e-20!45;UBERON:0003061!3.03e-20!45;UBERON:0004177!4.75e-19!29;UBERON:0002405!8.40e-17!70;UBERON:0003408!6.32e-16!24;UBERON:0002370!2.58e-14!23;UBERON:0000974!2.58e-14!23;UBERON:0004807!2.58e-14!23;UBERON:0005058!2.58e-14!23;UBERON:0003351!2.58e-14!23;UBERON:0009113!2.58e-14!23;UBERON:0003295!2.58e-14!23;UBERON:0009722!2.58e-14!23;UBERON:0005562!2.58e-14!23;UBERON:0007690!2.58e-14!23;UBERON:0006562!1.35e-13!24;UBERON:0001557!1.35e-13!24;UBERON:0001042!1.35e-13!24;UBERON:0008814!1.35e-13!24;UBERON:0009145!1.35e-13!24;UBERON:0000072!9.28e-12!27;UBERON:0005057!2.51e-10!51;UBERON:0000063!5.60e-10!35;UBERON:0003081!7.28e-10!88;UBERON:0002465!5.33e-08!3;UBERON:0001004!9.52e-08!42;UBERON:0000064!4.14e-07!99;UBERON:0000065!8.80e-07!41 | |ontology_enrichment_uberon=UBERON:0002193!3.28e-25!48;UBERON:0002390!3.03e-20!45;UBERON:0003061!3.03e-20!45;UBERON:0004177!4.75e-19!29;UBERON:0002405!8.40e-17!70;UBERON:0003408!6.32e-16!24;UBERON:0002370!2.58e-14!23;UBERON:0000974!2.58e-14!23;UBERON:0004807!2.58e-14!23;UBERON:0005058!2.58e-14!23;UBERON:0003351!2.58e-14!23;UBERON:0009113!2.58e-14!23;UBERON:0003295!2.58e-14!23;UBERON:0009722!2.58e-14!23;UBERON:0005562!2.58e-14!23;UBERON:0007690!2.58e-14!23;UBERON:0006562!1.35e-13!24;UBERON:0001557!1.35e-13!24;UBERON:0001042!1.35e-13!24;UBERON:0008814!1.35e-13!24;UBERON:0009145!1.35e-13!24;UBERON:0000072!9.28e-12!27;UBERON:0005057!2.51e-10!51;UBERON:0000063!5.60e-10!35;UBERON:0003081!7.28e-10!88;UBERON:0002465!5.33e-08!3;UBERON:0001004!9.52e-08!42;UBERON:0000064!4.14e-07!99;UBERON:0000065!8.80e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.78e-13,48;UBERON:0002405,2.78e-13,48;UBERON:0002390,1.88e-11,45;UBERON:0003061,1.88e-11,45;UBERON:0000029,2.98e-08,1;UBERON:0001097,2.98e-08,1;UBERON:0003968,2.98e-08,1;UBERON:0001467,2.98e-08,1;UBERON:0004177,5.01e-08,29;UBERON:0005057,5.01e-08,29;UBERON:0002370,3.34e-07,23;UBERON:0000974,3.34e-07,23;UBERON:0004807,3.34e-07,23;UBERON:0005058,3.34e-07,23;UBERON:0003351,3.34e-07,23;UBERON:0009113,3.34e-07,23;UBERON:0003295,3.34e-07,23;UBERON:0009722,3.34e-07,23;UBERON:0005562,3.34e-07,23;UBERON:0007690,3.34e-07,23;UBERON:0006562,6.71e-07,24;UBERON:0003408,6.71e-07,24;UBERON:0001557,6.71e-07,24;UBERON:0001042,6.71e-07,24;UBERON:0008814,6.71e-07,24;UBERON:0009145,6.71e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0.333109761815663,0.809901069559304,0,4.10100814965709,4.2505474417779,3.39511721438424,0,0.0992909512008853,0,0.799962113967033,0.68822784320151,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,1.43221356533985,0.79472541912506,0.600977247599844,0.295379054349154,1.41353029927407,0.838274873204998,1.10908803650525,0.487289403698762,1.15454209968395,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0.333109761815663,0.809901069559304,0,4.10100814965709,4.2505474417779,3.39511721438424,0,0.0992909512008853,0,0.799962113967033,0.68822784320151,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,1.43221356533985,0.79472541912506,0.600977247599844,0.295379054349154,1.41353029927407,0.838274873204998,1.10908803650525,0.487289403698762,1.15454209968395,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Rftn1 | |short_description=p7@Rftn1 | ||
}} | }} |
Latest revision as of 15:26, 26 September 2015
Short description: | p7@Rftn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rftn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 43bp_to_ENSMUST00000113195_5end |
EntrezGene: | Rftn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.52e-11 | 6 |
megakaryocyte | 2.52e-11 | 6 |
lymphocyte of B lineage | 2.54e-08 | 1 |
B cell | 2.54e-08 | 1 |
pro-B cell | 2.54e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 1.01e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.78e-13 | 48 |
immune system | 2.78e-13 | 48 |
hematopoietic system | 1.88e-11 | 45 |
blood island | 1.88e-11 | 45 |
lymph node | 2.98e-08 | 1 |
axillary lymph node | 2.98e-08 | 1 |
peripheral lymph node | 2.98e-08 | 1 |
shoulder | 2.98e-08 | 1 |
hemopoietic organ | 5.01e-08 | 29 |
immune organ | 5.01e-08 | 29 |
thymus | 3.34e-07 | 23 |
neck | 3.34e-07 | 23 |
respiratory system epithelium | 3.34e-07 | 23 |
hemolymphoid system gland | 3.34e-07 | 23 |
pharyngeal epithelium | 3.34e-07 | 23 |
thymic region | 3.34e-07 | 23 |
pharyngeal gland | 3.34e-07 | 23 |
entire pharyngeal arch endoderm | 3.34e-07 | 23 |
thymus primordium | 3.34e-07 | 23 |
early pharyngeal endoderm | 3.34e-07 | 23 |
pharynx | 6.71e-07 | 24 |
gland of gut | 6.71e-07 | 24 |
upper respiratory tract | 6.71e-07 | 24 |
chordate pharynx | 6.71e-07 | 24 |
pharyngeal arch system | 6.71e-07 | 24 |
pharyngeal region of foregut | 6.71e-07 | 24 |