FFCP PHASE1:Mm9::chr9:40273219..40273249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=235283 | |EntrezGene=235283 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-70bp_to_ENSMUST00000148170_5end | |||
|cluster_id=chr9:40273219..40273249,- | |||
|description=CAGE_peak_14_at_Gramd1b_5end | |||
|id=chr9:40273219..40273249,- | |||
|ontology_enrichment_celltype=CL:0002563!9.73e-09!9;CL:0002251!9.73e-09!9;CL:0000239!1.12e-08!6;CL:0000677!1.12e-08!6;CL:0000212!1.12e-08!6;CL:0000584!1.12e-08!6;CL:0000075!2.98e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.00e-10,6;CL:0000677,1.00e-10,6;CL:0000584,1.00e-10,6;CL:0000075,3.97e-09,7;CL:0000682,1.12e-07,3;CL:0002563,5.37e-07,9;CL:0002251,5.37e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.22e-18!43;UBERON:0005409!1.43e-15!59;UBERON:0000344!3.69e-15!15;UBERON:0001242!3.73e-13!13;UBERON:0000060!3.73e-13!13;UBERON:0001262!3.73e-13!13;UBERON:0004786!3.73e-13!13;UBERON:0004923!9.12e-11!24;UBERON:0003350!9.73e-09!9;UBERON:0004808!9.73e-09!9;UBERON:0001277!9.73e-09!9;UBERON:0000485!8.51e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-36,31;UBERON:0005409,3.07e-22,47;UBERON:0000344,2.14e-17,15;UBERON:0001242,5.41e-14,13;UBERON:0001262,5.41e-14,13;UBERON:0004786,5.41e-14,13;UBERON:0004923,3.73e-12,24;UBERON:0002108,1.29e-09,4;UBERON:0000331,2.59e-07,3;UBERON:0002116,2.59e-07,3;UBERON:0001204,2.59e-07,3;UBERON:0001168,2.59e-07,3;UBERON:0001007,2.77e-07,116;UBERON:0001555,2.77e-07,116;UBERON:0007026,2.77e-07,116;UBERON:0004119,4.59e-07,118;UBERON:0000925,4.59e-07,118;UBERON:0006595,4.59e-07,118;UBERON:0002113,5.01e-07,14;UBERON:0003918,5.01e-07,14;UBERON:0011143,5.01e-07,14;UBERON:0005095,5.01e-07,14;UBERON:0007687,5.01e-07,14;UBERON:0003350,5.37e-07,9;UBERON:0004808,5.37e-07,9;UBERON:0001277,5.37e-07,9 | |||
|phase1_expression=0,13.9590163055744,15.0149748998547,38.1104906246606,37.567179745976,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,2.71987118748791,2.06468352960453,4.59385571292016,9.47676391549965,3.44753972297422,5.32065574477847,4.78857246543868,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.709193985953,0,0,0,0,0,0,0,0,14.5845030963281,0,0,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8863325363681,16.3959351331397,0,0,0.257734922644187,2.21851877085677,3.33567065767305,3.80451252225118,10.9141684155238,7.74085087202851,7.03738584640755,6.96347652144028,3.8992817423824,2.69645822596266,5.83572734661674,10.5544874824815,0,0.228497025219458,0,1.01825663922657,1.16371492300575,1.75339549725796,3.98390183882821,8.11855813887812,8.79192875911699,8.88459580236964,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84271122485043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,11.3677526285642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.87345025498471,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.37456602987953,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.548783918618318,0,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,13.9590163055744,15.0149748998547,38.1104906246606,37.567179745976,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,2.71987118748791,2.06468352960453,4.59385571292016,9.47676391549965,3.44753972297422,5.32065574477847,4.78857246543868,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.709193985953,0,0,0,0,0,0,0,0,14.5845030963281,0,0,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8863325363681,16.3959351331397,0,0,0.257734922644187,2.21851877085677,3.33567065767305,3.80451252225118,10.9141684155238,7.74085087202851,7.03738584640755,6.96347652144028,3.8992817423824,2.69645822596266,5.83572734661674,10.5544874824815,0,0.228497025219458,0,1.01825663922657,1.16371492300575,1.75339549725796,3.98390183882821,8.11855813887812,8.79192875911699,8.88459580236964,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84271122485043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,11.3677526285642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.87345025498471,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.37456602987953,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.548783918618318,0,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p14@Gramd1b | |||
}} | }} |
Latest revision as of 15:21, 26 September 2015
Short description: | p14@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -70bp_to_ENSMUST00000148170_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.00e-10 | 6 |
gut absorptive cell | 1.00e-10 | 6 |
enterocyte | 1.00e-10 | 6 |
columnar/cuboidal epithelial cell | 3.97e-09 | 7 |
M cell of gut | 1.12e-07 | 3 |
intestinal epithelial cell | 5.37e-07 | 9 |
epithelial cell of alimentary canal | 5.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.31e-36 | 31 |
gastrointestinal system | 3.07e-22 | 47 |
mucosa | 2.14e-17 | 15 |
intestinal mucosa | 5.41e-14 | 13 |
wall of intestine | 5.41e-14 | 13 |
gastrointestinal system mucosa | 5.41e-14 | 13 |
organ component layer | 3.73e-12 | 24 |
small intestine | 1.29e-09 | 4 |
ileal mucosa | 2.59e-07 | 3 |
ileum | 2.59e-07 | 3 |
mucosa of small intestine | 2.59e-07 | 3 |
wall of small intestine | 2.59e-07 | 3 |
digestive system | 2.77e-07 | 116 |
digestive tract | 2.77e-07 | 116 |
primitive gut | 2.77e-07 | 116 |
endoderm-derived structure | 4.59e-07 | 118 |
endoderm | 4.59e-07 | 118 |
presumptive endoderm | 4.59e-07 | 118 |
kidney | 5.01e-07 | 14 |
kidney mesenchyme | 5.01e-07 | 14 |
upper urinary tract | 5.01e-07 | 14 |
kidney rudiment | 5.01e-07 | 14 |
kidney field | 5.01e-07 | 14 |
epithelium of mucosa | 5.37e-07 | 9 |
gastrointestinal system epithelium | 5.37e-07 | 9 |
intestinal epithelium | 5.37e-07 | 9 |