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FFCP PHASE1:Mm9::chr2:32576600..32576628,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27387
|EntrezGene=27387
|HGNC=
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=A2AK83,Q9QZS8
|UniProt=A2AK83,Q9QZS8
|association_with_transcript=8bp_to_uc008jgp.1,uc008jgq.1_5end
|association_with_transcript=8bp_to_uc008jgp.1,uc008jgq.1_5end
|cluster_id=chr2:32576600..32576628,+
|description=CAGE_peak_4_at_Sh2d3c_5end
|description=CAGE_peak_4_at_Sh2d3c_5end
|id=chr2:32576600..32576628,+
|id=chr2:32576600..32576628,+
|ontology_enrichment_celltype=CL:0000988!1.45e-10!32;CL:0002032!1.45e-10!32;CL:0000037!1.45e-10!32;CL:0000566!1.45e-10!32;CL:0000837!1.45e-10!32;CL:0000738!2.10e-08!17;CL:0002087!2.10e-08!17;CL:0002031!7.11e-08!25;CL:0000542!4.76e-07!13;CL:0000051!4.76e-07!13;CL:0000838!9.82e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000988,1.43e-12,32;CL:0002032,1.43e-12,32;CL:0000037,1.43e-12,32;CL:0000837,1.43e-12,32;CL:0002031,1.65e-09,25;CL:0000738,3.09e-09,17;CL:0002087,3.09e-09,17;CL:0000542,1.02e-07,13;CL:0000051,1.02e-07,13;CL:0000838,2.29e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!3.30e-16!48;UBERON:0002390!5.07e-15!45;UBERON:0003061!5.07e-15!45;UBERON:0002405!1.11e-11!70;UBERON:0000926!6.99e-11!193;UBERON:0004120!6.99e-11!193;UBERON:0006603!6.99e-11!193;UBERON:0004177!6.30e-10!29;UBERON:0003081!4.14e-09!88;UBERON:0001004!1.03e-07!42;UBERON:0000065!1.33e-07!41;UBERON:0003408!4.77e-07!24;UBERON:0002370!5.72e-07!23;UBERON:0000974!5.72e-07!23;UBERON:0004807!5.72e-07!23;UBERON:0005058!5.72e-07!23;UBERON:0003351!5.72e-07!23;UBERON:0009113!5.72e-07!23;UBERON:0003295!5.72e-07!23;UBERON:0009722!5.72e-07!23;UBERON:0005562!5.72e-07!23;UBERON:0007690!5.72e-07!23;UBERON:0001041!5.74e-07!92;UBERON:0001048!6.19e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.82e-19,48;UBERON:0002405,2.82e-19,48;UBERON:0002390,6.29e-18,45;UBERON:0003061,6.29e-18,45;UBERON:0004177,7.27e-12,29;UBERON:0005057,7.27e-12,29;UBERON:0003081,3.81e-10,87;UBERON:0001004,9.62e-10,42;UBERON:0000926,9.77e-10,120;UBERON:0004120,9.77e-10,120;UBERON:0006603,9.77e-10,120;UBERON:0000065,1.27e-09,41;UBERON:0003408,1.52e-08,24;UBERON:0002370,1.81e-08,23;UBERON:0000974,1.81e-08,23;UBERON:0004807,1.81e-08,23;UBERON:0005058,1.81e-08,23;UBERON:0003351,1.81e-08,23;UBERON:0009113,1.81e-08,23;UBERON:0003295,1.81e-08,23;UBERON:0009722,1.81e-08,23;UBERON:0005562,1.81e-08,23;UBERON:0007690,1.81e-08,23;UBERON:0001041,2.49e-08,80;UBERON:0000077,3.19e-08,35;UBERON:0006562,9.90e-08,24;UBERON:0001557,9.90e-08,24;UBERON:0001042,9.90e-08,24;UBERON:0008814,9.90e-08,24;UBERON:0009145,9.90e-08,24;UBERON:0001048,1.51e-07,134;UBERON:0002371,6.70e-07,16
|phase1_expression=0,0,0,0,0,0,0,26.4702813055231,1.54867594366833,2.34064526321993,2.91070545983358,3.74929147278081,30.9873321175482,27.0129043474702,3.99731714178795,7.28910962603373,3.49780939064073,37.3822665949512,36.3353249055208,25.4633791078818,0.510259740906419,16.9787526553514,13.8435888243636,2.55987876469451,3.21172993494038,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,53.5720487343242,23.440060335714,41.8818995179039,55.8819913629464,54.6436387966757,54.3771595394892,0,0,0,0,0.872100625521786,0,0.194429899074283,0.839918529752175,2.87505128729943,12.9192606664457,12.3311564141929,11.7632829699862,0,0,0,0,0,0,0.677689064138264,0,1.7997994345628,0,2.1314403448383,3.59520132622086,3.45796474789399,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.489963196859816,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0,0,0.883885756421003,0.569486723196412,0.186399445825301,0.227178579999552,0.529000920747499,0.289864488701678,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,1.02765491747154,25.3759125974228,0.742210695324124,0.867426633830679,2.43572382649713,1.61430848079241,0.60289056221049,1.17588707135705,0.251333182659351,0.247194967734374,0.289198713839823,12.3845477272982,1.13236794963186,5.74187947997023,4.84875253135222,0,0,0.209446706813455,1.78819938646014,5.27186547826049,2.39961092397363,6.98886248901856,0.149790639404823,0.457500602818626,0.251308704225729,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,2.34230536855727,6.59356944233493,1.0108910337347,0.420883711772948,1.69156575851515,1.14951052216736,1.0803727788321,0.30140963567143,1.36072998302656,2.562274405697,0.937017245597288,0,0.431135985865684,1.32374256117473,1.75951124163949,1.7535658594206,2.22437799380478,1.0447564995665,1.23469281844766,3.38358253591438,8.42655824775882,7.20574139921202,3.6941254921427,2.89976081549703,1.87620847984877,2.16074473753218,1.65721314909647,0.787056926989615,1.69693824176116,1.62773761325285,0.268273401399619,1.05088808130453,0.822799249567402,1.14917224855367,0.56748166682099,0.584799949701329,0.878200461164203,0.402619256281115,0,0.514523061896422,0,0,3.83918850963421,4.64473343720877,2.06187938115349,1.00841762311671,0.667134131534611,0.951128130562796,0.474529061544512,1.15289268306808,1.25667604400135,0.994782360205754,0.58489226135736,2.69645822596266,0.432276099749388,0.796565093017469,1.32767530667157,1.94222471436539,0,2.44381593414377,2.13347735884388,0.98190147846446,0.885311519739602,0.885660887877613,0.784993639206874,0.123397163921801,0,1.66845105716094,2.75182593158484,0.899448449539415,1.82574109249653,1.92941727801933,4.32863948028414,2.87696137450811,3.40483976227574,1.64736847912849,1.43768206527355,4.09355042435354,0.936113019343682,0.505157755894224,0.179397413521912,1.4473305640901,4.24932337383191,2.08440552947533,2.28150967018836,1.69745085775188,3.28566347603903,1.50755631697634,3.80869825417622,2.34160377429359,5.2019597555043,4.4292937929755,2.39182152986231,4.26044618260919,4.48980952851328,3.03763023021174,4.52373851817817,4.89515115436839,1.96705709207614,1.10374698521893,0.160550589987792,0.468846746368813,1.14754461763673,1.26235463602186,0.631016438832513,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0.790575555893047,0,0.851640511249612,4.80777129901589,5.04949573996086,1.48473110675282,0,5.82673526771955,3.02323556964751,1.69744571780308,3.2483208216885,1.53717573971964,1.03371317267288,1.45413491791002,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0.540183282093931,1.68166288917581,2.14337035031592,0.709360934569094,0.713475270408282,0.658196082408484,0.304464949114599,0.938686832254841,0,0.441056796109924,0.8244312647074,0.484393280087717,0.603129249281559,0.358117032009409,0,1.45740418314925,0.556275906031529,11.4483490134561,6.60437977482312,8.14855920426731,7.34636982318295,9.56859594047176,11.4389086603261,5.26933132980952,5.17820373597535,6.63359874261234,0,2.53068794864908,3.04979200690273,2.91614420218863,1.67270636811575,1.09181281873089,0.809186078308924,0.991841468704031,0.26175594198403,0.388844919875379,1.86401793926078,0,1.79419855252775,2.64733584731356,3.88902376688095,2.32487682259916,2.53434188236167,2.46450201156083,1.3020438484395,0.524296722128554,0.241584120826006,0,13.5884781870117,4.45995473638361,5.85452455839515,4.28738715826724,6.80301443536429,6.15912199821921,11.418567704397,10.0428878478713,9.08698049533329,11.27860738494,9.17518284745249,11.402572046551,10.0060315305943,12.0383209247016,0.453460767230423,1.55390167361845,2.42227412845584,2.18250001273302,0.965947970160952,1.12609485270709,0.549454872801795,1.2862102744744,2.00628841614145,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,1.03787347584177,3.19219898720825,1.70733605754134,2.43106717068294,2.51535795153579,1.10306105070008,1.7779738224129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|phase1_expression=0,0,0,0,0,0,0,26.4702813055231,1.54867594366833,2.34064526321993,2.91070545983358,3.74929147278081,30.9873321175482,27.0129043474702,3.99731714178795,7.28910962603373,3.49780939064073,37.3822665949512,36.3353249055208,25.4633791078818,0.510259740906419,16.9787526553514,13.8435888243636,2.55987876469451,3.21172993494038,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,53.5720487343242,23.440060335714,41.8818995179039,55.8819913629464,54.6436387966757,54.3771595394892,0,0,0,0,0.872100625521786,0,0.194429899074283,0.839918529752175,2.87505128729943,12.9192606664457,12.3311564141929,11.7632829699862,0,0,0,0,0,0,0.677689064138264,0,1.7997994345628,0,2.1314403448383,3.59520132622086,3.45796474789399,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.489963196859816,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0,0,0.883885756421003,0.569486723196412,0.186399445825301,0.227178579999552,0.529000920747499,0.289864488701678,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,1.02765491747154,25.3759125974228,0.742210695324124,0.867426633830679,2.43572382649713,1.61430848079241,0.60289056221049,1.17588707135705,0.251333182659351,0.247194967734374,0.289198713839823,12.3845477272982,1.13236794963186,5.74187947997023,4.84875253135222,0,0,0.209446706813455,1.78819938646014,5.27186547826049,2.39961092397363,6.98886248901856,0.149790639404823,0.457500602818626,0.251308704225729,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,2.34230536855727,6.59356944233493,1.0108910337347,0.420883711772948,1.69156575851515,1.14951052216736,1.0803727788321,0.30140963567143,1.36072998302656,2.562274405697,0.937017245597288,0,0.431135985865684,1.32374256117473,1.75951124163949,1.7535658594206,2.22437799380478,1.0447564995665,1.23469281844766,3.38358253591438,8.42655824775882,7.20574139921202,3.6941254921427,2.89976081549703,1.87620847984877,2.16074473753218,1.65721314909647,0.787056926989615,1.69693824176116,1.62773761325285,0.268273401399619,1.05088808130453,0.822799249567402,1.14917224855367,0.56748166682099,0.584799949701329,0.878200461164203,0.402619256281115,0,0.514523061896422,0,0,3.83918850963421,4.64473343720877,2.06187938115349,1.00841762311671,0.667134131534611,0.951128130562796,0.474529061544512,1.15289268306808,1.25667604400135,0.994782360205754,0.58489226135736,2.69645822596266,0.432276099749388,0.796565093017469,1.32767530667157,1.94222471436539,0,2.44381593414377,2.13347735884388,0.98190147846446,0.885311519739602,0.885660887877613,0.784993639206874,0.123397163921801,0,1.66845105716094,2.75182593158484,0.899448449539415,1.82574109249653,1.92941727801933,4.32863948028414,2.87696137450811,3.40483976227574,1.64736847912849,1.43768206527355,4.09355042435354,0.936113019343682,0.505157755894224,0.179397413521912,1.4473305640901,4.24932337383191,2.08440552947533,2.28150967018836,1.69745085775188,3.28566347603903,1.50755631697634,3.80869825417622,2.34160377429359,5.2019597555043,4.4292937929755,2.39182152986231,4.26044618260919,4.48980952851328,3.03763023021174,4.52373851817817,4.89515115436839,1.96705709207614,1.10374698521893,0.160550589987792,0.468846746368813,1.14754461763673,1.26235463602186,0.631016438832513,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0.790575555893047,0,0.851640511249612,4.80777129901589,5.04949573996086,1.48473110675282,0,5.82673526771955,3.02323556964751,1.69744571780308,3.2483208216885,1.53717573971964,1.03371317267288,1.45413491791002,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0.540183282093931,1.68166288917581,2.14337035031592,0.709360934569094,0.713475270408282,0.658196082408484,0.304464949114599,0.938686832254841,0,0.441056796109924,0.8244312647074,0.484393280087717,0.603129249281559,0.358117032009409,0,1.45740418314925,0.556275906031529,11.4483490134561,6.60437977482312,8.14855920426731,7.34636982318295,9.56859594047176,11.4389086603261,5.26933132980952,5.17820373597535,6.63359874261234,0,2.53068794864908,3.04979200690273,2.91614420218863,1.67270636811575,1.09181281873089,0.809186078308924,0.991841468704031,0.26175594198403,0.388844919875379,1.86401793926078,0,1.79419855252775,2.64733584731356,3.88902376688095,2.32487682259916,2.53434188236167,2.46450201156083,1.3020438484395,0.524296722128554,0.241584120826006,0,13.5884781870117,4.45995473638361,5.85452455839515,4.28738715826724,6.80301443536429,6.15912199821921,11.418567704397,10.0428878478713,9.08698049533329,11.27860738494,9.17518284745249,11.402572046551,10.0060315305943,12.0383209247016,0.453460767230423,1.55390167361845,2.42227412845584,2.18250001273302,0.965947970160952,1.12609485270709,0.549454872801795,1.2862102744744,2.00628841614145,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,1.03787347584177,3.19219898720825,1.70733605754134,2.43106717068294,2.51535795153579,1.10306105070008,1.7779738224129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|short_description=p4@Sh2d3c
|short_description=p4@Sh2d3c
}}
}}

Latest revision as of 14:43, 26 September 2015

Short description:p4@Sh2d3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sh2d3c_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 8bp_to_uc008jgp.1, uc008jgq.1_5end
EntrezGene:Sh2d3c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sh2d3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E430.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A237.38
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A436.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G853.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H341.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G955.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H254.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H454.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H925.38
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G211.45
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F28.15
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H19.57
spleen, neonate N25.CNhs11099.1354-25G311.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.63
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B513.59
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F811.42
thymus, neonate N03.CNhs11137.2104-43C710.04
thymus, neonate N06.CNhs11197.681-26C49.09
thymus, neonate N07.CNhs11211.713-19D311.28
thymus, neonate N10.CNhs11194.748-24E49.18
thymus, neonate N20.CNhs11186.820-7A211.40
thymus, neonate N25.CNhs11125.1362-25G710.01
thymus, neonate N30.CNhs11132.1393-42G212.04
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.01





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.82e-1948
immune system2.82e-1948
hematopoietic system6.29e-1845
blood island6.29e-1845
hemopoietic organ7.27e-1229
immune organ7.27e-1229
lateral plate mesoderm3.81e-1087
respiratory system9.62e-1042
mesoderm9.77e-10120
mesoderm-derived structure9.77e-10120
presumptive mesoderm9.77e-10120
respiratory tract1.27e-0941
gland of gut1.52e-0824
thymus1.81e-0823
neck1.81e-0823
respiratory system epithelium1.81e-0823
hemolymphoid system gland1.81e-0823
pharyngeal epithelium1.81e-0823
thymic region1.81e-0823
pharyngeal gland1.81e-0823
entire pharyngeal arch endoderm1.81e-0823
thymus primordium1.81e-0823
early pharyngeal endoderm1.81e-0823
foregut2.49e-0880
mixed endoderm/mesoderm-derived structure3.19e-0835
pharynx9.90e-0824
upper respiratory tract9.90e-0824
chordate pharynx9.90e-0824
pharyngeal arch system9.90e-0824
pharyngeal region of foregut9.90e-0824
primordium1.51e-07134
bone marrow6.70e-0716
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