FFCP PHASE1:Mm9::chr10:88348740..88348755,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216225 | |EntrezGene=216225 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1926 | |MCL_coexpression_id=1926 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BYF6 | |UniProt=Q8BYF6 | ||
|association_with_transcript=3bp_to_ENSMUST00000020255,NM_145423,uc007grz.1_5end | |association_with_transcript=3bp_to_ENSMUST00000020255,NM_145423,uc007grz.1_5end | ||
|cluster_id=chr10:88348740..88348755,+ | |||
|description=CAGE_peak_3_at_Slc5a8_5end | |description=CAGE_peak_3_at_Slc5a8_5end | ||
|id=chr10:88348740..88348755,+ | |id=chr10:88348740..88348755,+ | ||
|ontology_enrichment_celltype=CL:0000239!4.59e-07!6;CL:0000677!4.59e-07!6;CL:0000212!4.59e-07!6;CL:0000584!4.59e-07!6 | |ontology_enrichment_celltype=CL:0000239!4.59e-07!6;CL:0000677!4.59e-07!6;CL:0000212!4.59e-07!6;CL:0000584!4.59e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.43e-11,6;CL:0000677,1.43e-11,6;CL:0000584,1.43e-11,6;CL:0000075,8.76e-10,7;CL:0002563,2.11e-07,9;CL:0002251,2.11e-07,9;CL:0000682,4.73e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.11e-13!43;UBERON:0000344!7.83e-12!15;UBERON:0001242!4.39e-10!13;UBERON:0000060!4.39e-10!13;UBERON:0001262!4.39e-10!13;UBERON:0004786!4.39e-10!13;UBERON:0005409!3.98e-09!59 | |ontology_enrichment_uberon=UBERON:0000160!2.11e-13!43;UBERON:0000344!7.83e-12!15;UBERON:0001242!4.39e-10!13;UBERON:0000060!4.39e-10!13;UBERON:0001262!4.39e-10!13;UBERON:0004786!4.39e-10!13;UBERON:0005409!3.98e-09!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.67e-22,31;UBERON:0000344,2.88e-14,15;UBERON:0005409,5.50e-14,47;UBERON:0001242,2.54e-11,13;UBERON:0001262,2.54e-11,13;UBERON:0004786,2.54e-11,13;UBERON:0002108,1.00e-08,4;UBERON:0004923,6.78e-08,24;UBERON:0003350,2.11e-07,9;UBERON:0004808,2.11e-07,9;UBERON:0001277,2.11e-07,9;UBERON:0002113,2.22e-07,14;UBERON:0003918,2.22e-07,14;UBERON:0011143,2.22e-07,14;UBERON:0005095,2.22e-07,14;UBERON:0007687,2.22e-07,14;UBERON:0000331,2.52e-07,3;UBERON:0002116,2.52e-07,3;UBERON:0001204,2.52e-07,3;UBERON:0001168,2.52e-07,3;UBERON:0007023,6.36e-07,51 | |||
|phase1_expression=0,26.1731555729521,16.8349718574128,9.37639055051173,15.5277676283368,4.53274034162102,3.97141489012394,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,5.27974995218242,11.6998733344257,20.0981187440257,16.3689558540448,13.1437451938392,30.5937705324762,24.9509828462331,21.9513205548752,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,4.79572294820052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,8.17462576667492,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,1.68353484709179,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.11560453330835,0,0,0,0.201683524623343,0.667134131534611,0.951128130562796,9.01605216934572,1.4822905925161,1.75934646160189,2.58643413653496,2.53453313254856,8.08937467788799,5.83572734661674,5.77509692437665,0,0.342745537829186,3.38123207019241,2.8511185898344,7.5641469995374,7.50453272826409,7.33543830641385,12.989693022205,11.303908404579,15.4246454902251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,3.93411418415229,1.10374698521893,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0.712994756769443,0,0,1.03135543248187,1.36175842301515,0,0,0,0,0,0,0,0.23467170806371,0,0,1.48397627647332,0.484393280087717,0.422190474497091,1.43246812803764,2.9545361954111,4.66369338607761,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,13.0911123024711,12.4267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0,0,2.49403421976732,0,0,0,0.19318959403219,5.44279178808428,1.28206136987086,2.35805216986972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.758091635291392,0.760437899670719,0.188626341386076,0.468207537349412,0.448176066834085,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0.749431733813838,1.16965804222704,0.644613162144895,0.382576664137687,0.882365676478062,0 | |phase1_expression=0,26.1731555729521,16.8349718574128,9.37639055051173,15.5277676283368,4.53274034162102,3.97141489012394,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,5.27974995218242,11.6998733344257,20.0981187440257,16.3689558540448,13.1437451938392,30.5937705324762,24.9509828462331,21.9513205548752,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,4.79572294820052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,8.17462576667492,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,1.68353484709179,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.11560453330835,0,0,0,0.201683524623343,0.667134131534611,0.951128130562796,9.01605216934572,1.4822905925161,1.75934646160189,2.58643413653496,2.53453313254856,8.08937467788799,5.83572734661674,5.77509692437665,0,0.342745537829186,3.38123207019241,2.8511185898344,7.5641469995374,7.50453272826409,7.33543830641385,12.989693022205,11.303908404579,15.4246454902251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,3.93411418415229,1.10374698521893,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0.712994756769443,0,0,1.03135543248187,1.36175842301515,0,0,0,0,0,0,0,0.23467170806371,0,0,1.48397627647332,0.484393280087717,0.422190474497091,1.43246812803764,2.9545361954111,4.66369338607761,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,13.0911123024711,12.4267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0,0,2.49403421976732,0,0,0,0.19318959403219,5.44279178808428,1.28206136987086,2.35805216986972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.758091635291392,0.760437899670719,0.188626341386076,0.468207537349412,0.448176066834085,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0.749431733813838,1.16965804222704,0.644613162144895,0.382576664137687,0.882365676478062,0 | ||
|short_description=p3@Slc5a8 | |short_description=p3@Slc5a8 | ||
}} | }} |
Latest revision as of 13:41, 26 September 2015
Short description: | p3@Slc5a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc5a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1926 |
Association with transcript: | 3bp_to_ENSMUST00000020255, NM_145423, uc007grz.1_5end |
EntrezGene: | Slc5a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.43e-11 | 6 |
gut absorptive cell | 1.43e-11 | 6 |
enterocyte | 1.43e-11 | 6 |
columnar/cuboidal epithelial cell | 8.76e-10 | 7 |
intestinal epithelial cell | 2.11e-07 | 9 |
epithelial cell of alimentary canal | 2.11e-07 | 9 |
M cell of gut | 4.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.67e-22 | 31 |
mucosa | 2.88e-14 | 15 |
gastrointestinal system | 5.50e-14 | 47 |
intestinal mucosa | 2.54e-11 | 13 |
wall of intestine | 2.54e-11 | 13 |
gastrointestinal system mucosa | 2.54e-11 | 13 |
small intestine | 1.00e-08 | 4 |
organ component layer | 6.78e-08 | 24 |
epithelium of mucosa | 2.11e-07 | 9 |
gastrointestinal system epithelium | 2.11e-07 | 9 |
intestinal epithelium | 2.11e-07 | 9 |
kidney | 2.22e-07 | 14 |
kidney mesenchyme | 2.22e-07 | 14 |
upper urinary tract | 2.22e-07 | 14 |
kidney rudiment | 2.22e-07 | 14 |
kidney field | 2.22e-07 | 14 |
ileal mucosa | 2.52e-07 | 3 |
ileum | 2.52e-07 | 3 |
mucosa of small intestine | 2.52e-07 | 3 |
wall of small intestine | 2.52e-07 | 3 |
adult organism | 6.36e-07 | 51 |