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FFCP PHASE1:Mm9::chr2:27532513..27532525,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:27532513..27532525,+
|DHSsupport=NA
|short_description=p8@Rxra
|DPIdataset=NA
|description=CAGE_peak_8_at_Rxra_5end
|association_with_transcript=-195bp_to_ENSMUST00000077257,NM_011305,uc008ixs.1_5end
|EntrezGene=20181
|EntrezGene=20181
|HGNC=
|HGNC=
|MCL_coexpression_id=2752
|TSSclassifier=NA
|UniProt=P28700,A2AJP1,Q3UMU4,P28704
|UniProt=P28700,A2AJP1,Q3UMU4,P28704
|association_with_transcript=-195bp_to_ENSMUST00000077257,NM_011305,uc008ixs.1_5end
|cluster_id=chr2:27532513..27532525,+
|description=CAGE_peak_8_at_Rxra_5end
|id=chr2:27532513..27532525,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,1.76e-08,5;CL:0002092,3.30e-08,3;CL:0002540,3.30e-08,3;CL:0000151,2.93e-07,3;CL:0000499,2.93e-07,3;CL:0000327,2.93e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!7.34e-13!22;UBERON:0007499!7.34e-13!22;UBERON:0006925!7.34e-13!22;UBERON:0009497!7.34e-13!22;UBERON:0000015!7.34e-13!22;UBERON:0002423!7.34e-13!22;UBERON:0006235!7.34e-13!22;UBERON:0008835!7.34e-13!22;UBERON:0003894!7.34e-13!22;UBERON:0004161!7.34e-13!22;UBERON:0008836!7.34e-13!22;UBERON:0009854!9.29e-12!23;UBERON:0009856!9.29e-12!23;UBERON:0002365!4.54e-11!25;UBERON:0002330!4.54e-11!25;UBERON:0002405!1.38e-09!70;UBERON:0002368!7.44e-09!60;UBERON:0005057!1.22e-08!51;UBERON:0002530!1.79e-07!65;UBERON:0005172!2.96e-07!49;UBERON:0005173!2.96e-07!49;UBERON:0002417!2.96e-07!49;UBERON:0000916!2.96e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.72e-28,22;UBERON:0007499,5.72e-28,22;UBERON:0006925,5.72e-28,22;UBERON:0009497,5.72e-28,22;UBERON:0000015,5.72e-28,22;UBERON:0002423,5.72e-28,22;UBERON:0006235,5.72e-28,22;UBERON:0008835,5.72e-28,22;UBERON:0003894,5.72e-28,22;UBERON:0004161,5.72e-28,22;UBERON:0008836,5.72e-28,22;UBERON:0009854,1.46e-26,23;UBERON:0009856,1.46e-26,23;UBERON:0002365,4.34e-24,25;UBERON:0002330,4.34e-24,25;UBERON:0005256,6.11e-13,45;UBERON:0003929,3.84e-11,55;UBERON:0003914,8.01e-11,47;UBERON:0005172,3.26e-10,49;UBERON:0005173,3.26e-10,49;UBERON:0002417,3.26e-10,49;UBERON:0000916,3.26e-10,49;UBERON:0000014,3.57e-10,5;UBERON:0001003,3.57e-10,5;UBERON:0002097,3.57e-10,5;UBERON:0002199,3.57e-10,5;UBERON:0007029,3.57e-10,5;UBERON:0007376,3.57e-10,5;UBERON:0002416,3.57e-10,5;UBERON:0007383,3.57e-10,5;UBERON:0002368,1.03e-08,60;UBERON:0000490,1.58e-08,66;UBERON:0003104,2.07e-08,61;UBERON:0009142,2.07e-08,61;UBERON:0005911,5.81e-08,69;UBERON:0002530,1.02e-07,65
|phase1_expression=0.320297694209588,0.697950815278722,0,0.90739263392049,1.50268718983904,0.16787927191189,0,0.258246646883153,0.140788722151667,0.70219357896598,0,0,0,0,0.666219523631325,0.404950534779652,1.39912375625629,0,0.274228867211478,0,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,8.60630478782843,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0.85960031981627,0,0,0,0,1.69422266034566,1.77858959222228,6.74924787961049,6.92206453796882,7.8152812644071,1.79760066311043,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0.226714680320357,0.579728977403356,5.16254326188832,4.0798280022465,8.63525106620507,12.9955283489534,12.0967259516281,1.96622188184453,0.681721290312231,0,0,0.14084341977668,2.56652954828636,0,0,0,0,0,2.8545969929765,0,0.445326417194474,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0.360124259610698,0,0.0680364991513279,0,0,0.517406741478031,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,1.11218899690239,2.089512999133,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0,0.210289948564127,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0.123397163921801,9.48648406678877,0.166845105716094,0.196558995113203,0.224862112384854,1.21716072833102,0.964708639009667,1.2731292589071,2.30156909960649,2.7562988551756,2.47105271869273,17.2521847832825,4.46569137202204,3.74445207737473,5.55673531483646,4.30553792452589,7.23665282045051,0,0,0,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.35613120733451,0,0,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0.517434735131018,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0.304464949114599,0,0.21183207086382,0,1.15420377059036,1.93757312035087,1.74907482291652,1.3130957840345,1.64140899745061,0.291480836629851,0.18542530201051,0.683483523191411,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0,0,0.209088296014469,0.87345025498471,0.134864346384821,0.41326727862668,0.785267825952089,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.629156066554265,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.443068581523732,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0.419226325255965,0.735374033800057,0,0.618105171716683,0,0,0.50695859978048,0.377252682772152,0.37456602987953,0.576226371643824,0.459483751644906,1.90517476513229,0.347652977834566,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.29551344712669,1.63692417267876,0.464810523557898,0.578719832943424,0.249810577937946,0.233931608445408,1.07435527024149,0.191288332068843,0.882365676478062,0.231867835620421
|phase1_expression=0.320297694209588,0.697950815278722,0,0.90739263392049,1.50268718983904,0.16787927191189,0,0.258246646883153,0.140788722151667,0.70219357896598,0,0,0,0,0.666219523631325,0.404950534779652,1.39912375625629,0,0.274228867211478,0,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,8.60630478782843,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0.85960031981627,0,0,0,0,1.69422266034566,1.77858959222228,6.74924787961049,6.92206453796882,7.8152812644071,1.79760066311043,1.15265491596466,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0.226714680320357,0.579728977403356,5.16254326188832,4.0798280022465,8.63525106620507,12.9955283489534,12.0967259516281,1.96622188184453,0.681721290312231,0,0,0.14084341977668,2.56652954828636,0,0,0,0,0,2.8545969929765,0,0.445326417194474,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0.360124259610698,0,0.0680364991513279,0,0,0.517406741478031,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,1.11218899690239,2.089512999133,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0,0.210289948564127,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0.123397163921801,9.48648406678877,0.166845105716094,0.196558995113203,0.224862112384854,1.21716072833102,0.964708639009667,1.2731292589071,2.30156909960649,2.7562988551756,2.47105271869273,17.2521847832825,4.46569137202204,3.74445207737473,5.55673531483646,4.30553792452589,7.23665282045051,0,0,0,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.35613120733451,0,0,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0.517434735131018,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0.304464949114599,0,0.21183207086382,0,1.15420377059036,1.93757312035087,1.74907482291652,1.3130957840345,1.64140899745061,0.291480836629851,0.18542530201051,0.683483523191411,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0,0,0.209088296014469,0.87345025498471,0.134864346384821,0.41326727862668,0.785267825952089,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.629156066554265,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.443068581523732,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0.419226325255965,0.735374033800057,0,0.618105171716683,0,0,0.50695859978048,0.377252682772152,0.37456602987953,0.576226371643824,0.459483751644906,1.90517476513229,0.347652977834566,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.29551344712669,1.63692417267876,0.464810523557898,0.578719832943424,0.249810577937946,0.233931608445408,1.07435527024149,0.191288332068843,0.882365676478062,0.231867835620421
|short_description=p8@Rxra
}}
}}

Latest revision as of 11:42, 26 September 2015

Short description:p8@Rxra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Rxra_5end
Coexpression cluster:MCL_coexpression_mm9:2752
Association with transcript: -195bp_to_ENSMUST00000077257, NM_011305, uc008ixs.1_5end
EntrezGene:Rxra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Rxra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.10
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B29.49
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte1.76e-085
bone marrow cell3.30e-083
mesenchymal stem cell of the bone marrow3.30e-083
secretory cell2.93e-073
stromal cell2.93e-073
extracellular matrix secreting cell2.93e-073

Uber anatomy
Ontology termp-valuen
liver5.72e-2822
epithelial sac5.72e-2822
digestive gland5.72e-2822
epithelium of foregut-midgut junction5.72e-2822
anatomical boundary5.72e-2822
hepatobiliary system5.72e-2822
foregut-midgut junction5.72e-2822
hepatic diverticulum5.72e-2822
liver primordium5.72e-2822
septum transversum5.72e-2822
liver bud5.72e-2822
digestive tract diverticulum1.46e-2623
sac1.46e-2623
exocrine gland4.34e-2425
exocrine system4.34e-2425
trunk mesenchyme6.11e-1345
gut epithelium3.84e-1155
epithelial tube8.01e-1147
abdomen element3.26e-1049
abdominal segment element3.26e-1049
abdominal segment of trunk3.26e-1049
abdomen3.26e-1049
zone of skin3.57e-105
skin epidermis3.57e-105
skin of body3.57e-105
integument3.57e-105
surface3.57e-105
outer epithelium3.57e-105
integumental system3.57e-105
enveloping layer of ectoderm3.57e-105
endocrine gland1.03e-0860
unilaminar epithelium1.58e-0866
mesenchyme2.07e-0861
entire embryonic mesenchyme2.07e-0861
endo-epithelium5.81e-0869
gland1.02e-0765
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