FFCP PHASE1:Mm9::chr14:75347672..75347690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380916 | |EntrezGene=380916 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2846 | |||
|TSSclassifier=NA | |||
|UniProt=F6V185,P62046,Q3UP01 | |UniProt=F6V185,P62046,Q3UP01 | ||
|association_with_transcript=0bp_to_ENSMUST00000088968,ENSMUST00000088970,NM_001033439,NM_001252132,uc007uqf.1,uc007uqg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000088968,ENSMUST00000088970,NM_001033439,NM_001252132,uc007uqf.1,uc007uqg.1_5end | ||
|cluster_id=chr14:75347672..75347690,- | |||
|description=CAGE_peak_1_at_Lrch1_5end | |description=CAGE_peak_1_at_Lrch1_5end | ||
|id=chr14:75347672..75347690,- | |id=chr14:75347672..75347690,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.01e-12!42;UBERON:0000065!3.62e-12!41;UBERON:0004177!4.50e-12!29;UBERON:0002390!3.62e-11!45;UBERON:0003061!3.62e-11!45;UBERON:0002193!6.87e-11!48;UBERON:0006562!1.70e-10!24;UBERON:0001557!1.70e-10!24;UBERON:0001042!1.70e-10!24;UBERON:0008814!1.70e-10!24;UBERON:0009145!1.70e-10!24;UBERON:0003408!5.26e-10!24;UBERON:0002370!5.51e-10!23;UBERON:0000974!5.51e-10!23;UBERON:0004807!5.51e-10!23;UBERON:0005058!5.51e-10!23;UBERON:0003351!5.51e-10!23;UBERON:0009113!5.51e-10!23;UBERON:0003295!5.51e-10!23;UBERON:0009722!5.51e-10!23;UBERON:0005562!5.51e-10!23;UBERON:0007690!5.51e-10!23;UBERON:0000072!5.23e-08!27;UBERON:0000077!1.53e-07!97;UBERON:0003081!2.27e-07!88;UBERON:0001041!4.44e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.22e-12,35;UBERON:0001004,3.01e-12,42;UBERON:0000065,3.62e-12,41;UBERON:0004177,4.50e-12,29;UBERON:0005057,4.50e-12,29;UBERON:0002390,3.62e-11,45;UBERON:0003061,3.62e-11,45;UBERON:0002193,6.87e-11,48;UBERON:0002405,6.87e-11,48;UBERON:0006562,1.70e-10,24;UBERON:0001557,1.70e-10,24;UBERON:0001042,1.70e-10,24;UBERON:0008814,1.70e-10,24;UBERON:0009145,1.70e-10,24;UBERON:0003408,5.26e-10,24;UBERON:0002370,5.51e-10,23;UBERON:0000974,5.51e-10,23;UBERON:0004807,5.51e-10,23;UBERON:0005058,5.51e-10,23;UBERON:0003351,5.51e-10,23;UBERON:0009113,5.51e-10,23;UBERON:0003295,5.51e-10,23;UBERON:0009722,5.51e-10,23;UBERON:0005562,5.51e-10,23;UBERON:0007690,5.51e-10,23;UBERON:0001041,1.23e-08,80;UBERON:0000072,5.23e-08,27;UBERON:0003081,5.98e-07,87 | |||
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| ||
|short_description=p1@Lrch1 | |short_description=p1@Lrch1 | ||
}} | }} |
Latest revision as of 09:42, 26 September 2015
Short description: | p1@Lrch1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrch1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2846 |
Association with transcript: | 0bp_to_ENSMUST00000088968, ENSMUST00000088970, NM_001033439, NM_001252132, uc007uqf.1, uc007uqg.1_5end |
EntrezGene: | Lrch1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 1.22e-12 | 35 |
respiratory system | 3.01e-12 | 42 |
respiratory tract | 3.62e-12 | 41 |
hemopoietic organ | 4.50e-12 | 29 |
immune organ | 4.50e-12 | 29 |
hematopoietic system | 3.62e-11 | 45 |
blood island | 3.62e-11 | 45 |
hemolymphoid system | 6.87e-11 | 48 |
immune system | 6.87e-11 | 48 |
pharynx | 1.70e-10 | 24 |
upper respiratory tract | 1.70e-10 | 24 |
chordate pharynx | 1.70e-10 | 24 |
pharyngeal arch system | 1.70e-10 | 24 |
pharyngeal region of foregut | 1.70e-10 | 24 |
gland of gut | 5.26e-10 | 24 |
thymus | 5.51e-10 | 23 |
neck | 5.51e-10 | 23 |
respiratory system epithelium | 5.51e-10 | 23 |
hemolymphoid system gland | 5.51e-10 | 23 |
pharyngeal epithelium | 5.51e-10 | 23 |
thymic region | 5.51e-10 | 23 |
pharyngeal gland | 5.51e-10 | 23 |
entire pharyngeal arch endoderm | 5.51e-10 | 23 |
thymus primordium | 5.51e-10 | 23 |
early pharyngeal endoderm | 5.51e-10 | 23 |
foregut | 1.23e-08 | 80 |
segment of respiratory tract | 5.23e-08 | 27 |
lateral plate mesoderm | 5.98e-07 | 87 |