FFCP PHASE1:Mm9::chr10:79613557..79613570,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59090 | |EntrezGene=59090 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=123 | |MCL_coexpression_id=123 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z7H2 | |UniProt=D3Z7H2 | ||
|association_with_transcript=-328bp_to_ENSMUST00000146516_5end | |association_with_transcript=-328bp_to_ENSMUST00000146516_5end | ||
|cluster_id=chr10:79613557..79613570,+ | |||
|description=CAGE_peak_10_at_Midn_5end | |description=CAGE_peak_10_at_Midn_5end | ||
|id=chr10:79613557..79613570,+ | |id=chr10:79613557..79613570,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.10e-10!29;UBERON:0003408!1.03e-08!24;UBERON:0002370!2.79e-08!23;UBERON:0000974!2.79e-08!23;UBERON:0004807!2.79e-08!23;UBERON:0005058!2.79e-08!23;UBERON:0003351!2.79e-08!23;UBERON:0009113!2.79e-08!23;UBERON:0003295!2.79e-08!23;UBERON:0009722!2.79e-08!23;UBERON:0005562!2.79e-08!23;UBERON:0007690!2.79e-08!23;UBERON:0001041!4.41e-08!92;UBERON:0002075!1.29e-07!19;UBERON:0006562!1.45e-07!24;UBERON:0001557!1.45e-07!24;UBERON:0001042!1.45e-07!24;UBERON:0008814!1.45e-07!24;UBERON:0009145!1.45e-07!24;UBERON:0002193!2.22e-07!48;UBERON:0001004!2.54e-07!42;UBERON:0000072!3.57e-07!27;UBERON:0000077!3.82e-07!97;UBERON:0000949!5.53e-07!72;UBERON:0000065!6.01e-07!41 | |ontology_enrichment_uberon=UBERON:0004177!7.10e-10!29;UBERON:0003408!1.03e-08!24;UBERON:0002370!2.79e-08!23;UBERON:0000974!2.79e-08!23;UBERON:0004807!2.79e-08!23;UBERON:0005058!2.79e-08!23;UBERON:0003351!2.79e-08!23;UBERON:0009113!2.79e-08!23;UBERON:0003295!2.79e-08!23;UBERON:0009722!2.79e-08!23;UBERON:0005562!2.79e-08!23;UBERON:0007690!2.79e-08!23;UBERON:0001041!4.41e-08!92;UBERON:0002075!1.29e-07!19;UBERON:0006562!1.45e-07!24;UBERON:0001557!1.45e-07!24;UBERON:0001042!1.45e-07!24;UBERON:0008814!1.45e-07!24;UBERON:0009145!1.45e-07!24;UBERON:0002193!2.22e-07!48;UBERON:0001004!2.54e-07!42;UBERON:0000072!3.57e-07!27;UBERON:0000077!3.82e-07!97;UBERON:0000949!5.53e-07!72;UBERON:0000065!6.01e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-17,23;UBERON:0000974,1.48e-17,23;UBERON:0004807,1.48e-17,23;UBERON:0005058,1.48e-17,23;UBERON:0003351,1.48e-17,23;UBERON:0009113,1.48e-17,23;UBERON:0003295,1.48e-17,23;UBERON:0009722,1.48e-17,23;UBERON:0005562,1.48e-17,23;UBERON:0007690,1.48e-17,23;UBERON:0006562,1.05e-16,24;UBERON:0003408,1.05e-16,24;UBERON:0001557,1.05e-16,24;UBERON:0001042,1.05e-16,24;UBERON:0008814,1.05e-16,24;UBERON:0009145,1.05e-16,24;UBERON:0004177,1.20e-15,29;UBERON:0005057,1.20e-15,29;UBERON:0002193,5.18e-15,48;UBERON:0002405,5.18e-15,48;UBERON:0000072,1.56e-14,27;UBERON:0002390,3.29e-14,45;UBERON:0003061,3.29e-14,45;UBERON:0000077,1.95e-12,35;UBERON:0007811,7.64e-12,36;UBERON:0000949,8.06e-12,72;UBERON:0000153,1.99e-09,43;UBERON:0000065,1.26e-08,41;UBERON:0001004,2.35e-08,42;UBERON:0002368,4.14e-08,60;UBERON:0002530,3.17e-07,65 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,2.06597317506522,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,1.19840510951844,0.34968160967599,0.666219523631325,0.404950534779652,0,2.68142840554502,3.70208970735495,4.2438965179803,0.850432901510698,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.251793635951155,0,0.367093504323363,0,0,0,0,0.279972843250725,0,2.34895648480831,1.45072428402269,5.71359458542189,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.725827286159344,0.135005938331691,0.630974884054146,0,0,0,0.383381884072945,0.919218786610021,0,0,0,0.131886287730194,0.365950574409639,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0,4.91981978929626,0.445326417194474,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,0.149790639404823,0,1.00523481690292,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.340182495756639,0,0.187403449119458,1.03481348295606,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.983821158737019,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.514523061896422,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.164970122972535,3.98235415019888,1.21390318077491,1.209294227859,0.943025398779491,0.295301892880773,0.614870295887855,0,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,2.04263763452273,0.540183282093931,0.646793418913773,1.07168517515796,0.532020700926821,1.24858172321449,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.683483523191411,0.206386867963223,0.185194527369712,0.188368457004691,0.956859594047176,2.0590035588587,0.339956859987711,0,0.276399947608848,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,0.621339313086926,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,0.5208175393758,0,0,0.576060012515731,3.16011120628178,0.405450430580328,0.924398614483445,1.94881234466693,4.833720783022,2.38417625737518,2.04332264183947,1.18151621739662,1.81739609906666,1.5241361331,2.31900225814733,3.21611006441183,2.5977197242889,1.40252282617883,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0,0,0.419226325255965,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,2.06597317506522,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,1.19840510951844,0.34968160967599,0.666219523631325,0.404950534779652,0,2.68142840554502,3.70208970735495,4.2438965179803,0.850432901510698,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.251793635951155,0,0.367093504323363,0,0,0,0,0.279972843250725,0,2.34895648480831,1.45072428402269,5.71359458542189,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.725827286159344,0.135005938331691,0.630974884054146,0,0,0,0.383381884072945,0.919218786610021,0,0,0,0.131886287730194,0.365950574409639,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0,4.91981978929626,0.445326417194474,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,0.149790639404823,0,1.00523481690292,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.340182495756639,0,0.187403449119458,1.03481348295606,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.983821158737019,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.514523061896422,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.164970122972535,3.98235415019888,1.21390318077491,1.209294227859,0.943025398779491,0.295301892880773,0.614870295887855,0,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,2.04263763452273,0.540183282093931,0.646793418913773,1.07168517515796,0.532020700926821,1.24858172321449,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.683483523191411,0.206386867963223,0.185194527369712,0.188368457004691,0.956859594047176,2.0590035588587,0.339956859987711,0,0.276399947608848,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,0.621339313086926,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,0.5208175393758,0,0,0.576060012515731,3.16011120628178,0.405450430580328,0.924398614483445,1.94881234466693,4.833720783022,2.38417625737518,2.04332264183947,1.18151621739662,1.81739609906666,1.5241361331,2.31900225814733,3.21611006441183,2.5977197242889,1.40252282617883,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0,0,0.419226325255965,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p10@Midn | |short_description=p10@Midn | ||
}} | }} |
Latest revision as of 09:33, 26 September 2015
Short description: | p10@Midn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Midn_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | -328bp_to_ENSMUST00000146516_5end |
EntrezGene: | Midn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.48e-17 | 23 |
neck | 1.48e-17 | 23 |
respiratory system epithelium | 1.48e-17 | 23 |
hemolymphoid system gland | 1.48e-17 | 23 |
pharyngeal epithelium | 1.48e-17 | 23 |
thymic region | 1.48e-17 | 23 |
pharyngeal gland | 1.48e-17 | 23 |
entire pharyngeal arch endoderm | 1.48e-17 | 23 |
thymus primordium | 1.48e-17 | 23 |
early pharyngeal endoderm | 1.48e-17 | 23 |
pharynx | 1.05e-16 | 24 |
gland of gut | 1.05e-16 | 24 |
upper respiratory tract | 1.05e-16 | 24 |
chordate pharynx | 1.05e-16 | 24 |
pharyngeal arch system | 1.05e-16 | 24 |
pharyngeal region of foregut | 1.05e-16 | 24 |
hemopoietic organ | 1.20e-15 | 29 |
immune organ | 1.20e-15 | 29 |
hemolymphoid system | 5.18e-15 | 48 |
immune system | 5.18e-15 | 48 |
segment of respiratory tract | 1.56e-14 | 27 |
hematopoietic system | 3.29e-14 | 45 |
blood island | 3.29e-14 | 45 |
mixed endoderm/mesoderm-derived structure | 1.95e-12 | 35 |
craniocervical region | 7.64e-12 | 36 |
endocrine system | 8.06e-12 | 72 |
anterior region of body | 1.99e-09 | 43 |
respiratory tract | 1.26e-08 | 41 |
respiratory system | 2.35e-08 | 42 |
endocrine gland | 4.14e-08 | 60 |
gland | 3.17e-07 | 65 |