FFCP PHASE1:Mm9::chr17:32795954..32795965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=631304 | |EntrezGene=631304 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |MCL_coexpression_id=126 | ||
|TSSclassifier=NA | |||
|UniProt=G3UW81 | |UniProt=G3UW81 | ||
|association_with_transcript=-389bp_to_ENSMUST00000165061_5end | |association_with_transcript=-389bp_to_ENSMUST00000165061_5end | ||
|cluster_id=chr17:32795954..32795965,+ | |||
|description=CAGE_peak_7_at_Cyp4f40_5end | |description=CAGE_peak_7_at_Cyp4f40_5end | ||
|id=chr17:32795954..32795965,+ | |id=chr17:32795954..32795965,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.97e-13!6;CL:0000677!1.97e-13!6;CL:0000212!1.97e-13!6;CL:0000584!1.97e-13!6;CL:0002563!1.51e-11!9;CL:0002251!1.51e-11!9;CL:0000075!2.11e-11!7;CL:0000473!4.79e-08!3;CL:0000627!4.79e-08!3;CL:0000682!4.79e-08!3;CL:0000066!2.25e-07!25 | |ontology_enrichment_celltype=CL:0000239!1.97e-13!6;CL:0000677!1.97e-13!6;CL:0000212!1.97e-13!6;CL:0000584!1.97e-13!6;CL:0002563!1.51e-11!9;CL:0002251!1.51e-11!9;CL:0000075!2.11e-11!7;CL:0000473!4.79e-08!3;CL:0000627!4.79e-08!3;CL:0000682!4.79e-08!3;CL:0000066!2.25e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.81e-23,6;CL:0000677,7.81e-23,6;CL:0000584,7.81e-23,6;CL:0000075,1.61e-19,7;CL:0002563,4.29e-15,9;CL:0002251,4.29e-15,9;CL:0000682,3.52e-13,3;CL:0000066,1.34e-11,25;CL:0002076,7.06e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.81e-37!43;UBERON:0005409!1.46e-31!59;UBERON:0000344!4.85e-24!15;UBERON:0001242!1.03e-19!13;UBERON:0000060!1.03e-19!13;UBERON:0001262!1.03e-19!13;UBERON:0004786!1.03e-19!13;UBERON:0004923!7.87e-14!24;UBERON:0001007!9.52e-13!128;UBERON:0001555!9.52e-13!128;UBERON:0007026!9.52e-13!128;UBERON:0004119!1.97e-12!130;UBERON:0000925!1.97e-12!130;UBERON:0006595!1.97e-12!130;UBERON:0003350!1.51e-11!9;UBERON:0004808!1.51e-11!9;UBERON:0001277!1.51e-11!9;UBERON:0004921!7.90e-11!126;UBERON:0004185!7.90e-11!126;UBERON:0000485!3.04e-09!11;UBERON:0000331!2.67e-08!3;UBERON:0002116!2.67e-08!3;UBERON:0001204!2.67e-08!3;UBERON:0001168!2.67e-08!3 | |ontology_enrichment_uberon=UBERON:0000160!5.81e-37!43;UBERON:0005409!1.46e-31!59;UBERON:0000344!4.85e-24!15;UBERON:0001242!1.03e-19!13;UBERON:0000060!1.03e-19!13;UBERON:0001262!1.03e-19!13;UBERON:0004786!1.03e-19!13;UBERON:0004923!7.87e-14!24;UBERON:0001007!9.52e-13!128;UBERON:0001555!9.52e-13!128;UBERON:0007026!9.52e-13!128;UBERON:0004119!1.97e-12!130;UBERON:0000925!1.97e-12!130;UBERON:0006595!1.97e-12!130;UBERON:0003350!1.51e-11!9;UBERON:0004808!1.51e-11!9;UBERON:0001277!1.51e-11!9;UBERON:0004921!7.90e-11!126;UBERON:0004185!7.90e-11!126;UBERON:0000485!3.04e-09!11;UBERON:0000331!2.67e-08!3;UBERON:0002116!2.67e-08!3;UBERON:0001204!2.67e-08!3;UBERON:0001168!2.67e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.11e-31,15;UBERON:0000160,1.14e-30,31;UBERON:0001242,8.67e-24,13;UBERON:0001262,8.67e-24,13;UBERON:0004786,8.67e-24,13;UBERON:0005409,4.75e-22,47;UBERON:0004923,1.00e-18,24;UBERON:0003350,4.29e-15,9;UBERON:0004808,4.29e-15,9;UBERON:0001277,4.29e-15,9;UBERON:0000331,1.24e-13,3;UBERON:0002116,1.24e-13,3;UBERON:0001204,1.24e-13,3;UBERON:0001168,1.24e-13,3;UBERON:0000485,2.85e-12,11;UBERON:0002108,2.41e-10,4;UBERON:0001155,9.35e-10,2;UBERON:0000059,9.35e-10,2;UBERON:0001007,1.44e-09,116;UBERON:0001555,1.44e-09,116;UBERON:0007026,1.44e-09,116;UBERON:0001962,1.67e-09,2;UBERON:0001961,1.67e-09,2;UBERON:0001744,1.67e-09,2;UBERON:0004119,2.38e-09,118;UBERON:0000925,2.38e-09,118;UBERON:0006595,2.38e-09,118;UBERON:0004921,2.36e-07,114 | |||
|phase1_expression=0,3.83872948403297,2.27499619694768,3.93203474698879,2.00358291978539,1.84667199103079,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.12936705920906,4.01962374880514,6.8921919385452,2.58565479223067,13.3016393619462,10.5852654499171,2.88249663851896,0,0,0,0,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,2.3800550999719,0,0,0.128867461322093,0.201683524623343,0.889512175379481,0.380451252225118,3.32170343081158,0.329397909448022,0.251335208800269,0.198956472041151,0.974820435595601,2.69645822596266,2.59365659849633,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.655087691238533,0,0,0,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0,3.83872948403297,2.27499619694768,3.93203474698879,2.00358291978539,1.84667199103079,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.12936705920906,4.01962374880514,6.8921919385452,2.58565479223067,13.3016393619462,10.5852654499171,2.88249663851896,0,0,0,0,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,2.3800550999719,0,0,0.128867461322093,0.201683524623343,0.889512175379481,0.380451252225118,3.32170343081158,0.329397909448022,0.251335208800269,0.198956472041151,0.974820435595601,2.69645822596266,2.59365659849633,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.655087691238533,0,0,0,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p7@Cyp4f40 | |short_description=p7@Cyp4f40 | ||
}} | }} |
Latest revision as of 06:28, 26 September 2015
Short description: | p7@Cyp4f40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cyp4f40_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -389bp_to_ENSMUST00000165061_5end |
EntrezGene: | Cyp4f40 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.81e-23 | 6 |
gut absorptive cell | 7.81e-23 | 6 |
enterocyte | 7.81e-23 | 6 |
columnar/cuboidal epithelial cell | 1.61e-19 | 7 |
intestinal epithelial cell | 4.29e-15 | 9 |
epithelial cell of alimentary canal | 4.29e-15 | 9 |
M cell of gut | 3.52e-13 | 3 |
epithelial cell | 1.34e-11 | 25 |
endo-epithelial cell | 7.06e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.11e-31 | 15 |
intestine | 1.14e-30 | 31 |
intestinal mucosa | 8.67e-24 | 13 |
wall of intestine | 8.67e-24 | 13 |
gastrointestinal system mucosa | 8.67e-24 | 13 |
gastrointestinal system | 4.75e-22 | 47 |
organ component layer | 1.00e-18 | 24 |
epithelium of mucosa | 4.29e-15 | 9 |
gastrointestinal system epithelium | 4.29e-15 | 9 |
intestinal epithelium | 4.29e-15 | 9 |
ileal mucosa | 1.24e-13 | 3 |
ileum | 1.24e-13 | 3 |
mucosa of small intestine | 1.24e-13 | 3 |
wall of small intestine | 1.24e-13 | 3 |
simple columnar epithelium | 2.85e-12 | 11 |
small intestine | 2.41e-10 | 4 |
colon | 9.35e-10 | 2 |
large intestine | 9.35e-10 | 2 |
digestive system | 1.44e-09 | 116 |
digestive tract | 1.44e-09 | 116 |
primitive gut | 1.44e-09 | 116 |
gut-associated lymphoid tissue | 1.67e-09 | 2 |
mucosa-associated lymphoid tissue | 1.67e-09 | 2 |
lymphoid tissue | 1.67e-09 | 2 |
endoderm-derived structure | 2.38e-09 | 118 |
endoderm | 2.38e-09 | 118 |
presumptive endoderm | 2.38e-09 | 118 |
subdivision of digestive tract | 2.36e-07 | 114 |