FFCP PHASE1:Mm9::chr5:75098978..75098991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16924 | |EntrezGene=16924 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=728 | |||
|TSSclassifier=NA | |||
|UniProt=O70263 | |UniProt=O70263 | ||
|association_with_transcript=-42bp_to_ENSMUST00000117388_5end | |association_with_transcript=-42bp_to_ENSMUST00000117388_5end | ||
|cluster_id=chr5:75098978..75098991,- | |||
|description=CAGE_peak_4_at_Lnx1_5end | |description=CAGE_peak_4_at_Lnx1_5end | ||
|id=chr5:75098978..75098991,- | |id=chr5:75098978..75098991,- | ||
|ontology_enrichment_celltype=CL:0002563!2.99e-08!9;CL:0002251!2.99e-08!9 | |ontology_enrichment_celltype=CL:0002563!2.99e-08!9;CL:0002251!2.99e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.52e-13,9;CL:0002251,4.52e-13,9;CL:0000239,8.21e-12,6;CL:0000677,8.21e-12,6;CL:0000584,8.21e-12,6;CL:0000075,5.44e-10,7;CL:0000066,3.33e-07,25;CL:0002076,3.40e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.59e-12!15;UBERON:0001242!5.27e-11!13;UBERON:0000060!5.27e-11!13;UBERON:0001262!5.27e-11!13;UBERON:0004786!5.27e-11!13;UBERON:0005409!2.89e-10!59;UBERON:0000160!1.47e-09!43;UBERON:0000485!2.98e-08!11;UBERON:0003350!2.99e-08!9;UBERON:0004808!2.99e-08!9;UBERON:0001277!2.99e-08!9;UBERON:0004923!4.71e-08!24;UBERON:0004119!3.56e-07!130;UBERON:0000925!3.56e-07!130;UBERON:0006595!3.56e-07!130 | |ontology_enrichment_uberon=UBERON:0000344!2.59e-12!15;UBERON:0001242!5.27e-11!13;UBERON:0000060!5.27e-11!13;UBERON:0001262!5.27e-11!13;UBERON:0004786!5.27e-11!13;UBERON:0005409!2.89e-10!59;UBERON:0000160!1.47e-09!43;UBERON:0000485!2.98e-08!11;UBERON:0003350!2.99e-08!9;UBERON:0004808!2.99e-08!9;UBERON:0001277!2.99e-08!9;UBERON:0004923!4.71e-08!24;UBERON:0004119!3.56e-07!130;UBERON:0000925!3.56e-07!130;UBERON:0006595!3.56e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.39e-19,15;UBERON:0005409,1.98e-18,47;UBERON:0000160,7.35e-18,31;UBERON:0001242,2.00e-16,13;UBERON:0001262,2.00e-16,13;UBERON:0004786,2.00e-16,13;UBERON:0003350,4.52e-13,9;UBERON:0004808,4.52e-13,9;UBERON:0001277,4.52e-13,9;UBERON:0004923,1.20e-12,24;UBERON:0000014,5.98e-11,5;UBERON:0001003,5.98e-11,5;UBERON:0002097,5.98e-11,5;UBERON:0002199,5.98e-11,5;UBERON:0007029,5.98e-11,5;UBERON:0007376,5.98e-11,5;UBERON:0002416,5.98e-11,5;UBERON:0007383,5.98e-11,5;UBERON:0000485,2.15e-10,11;UBERON:0003102,5.71e-09,22;UBERON:0004119,2.57e-08,118;UBERON:0000925,2.57e-08,118;UBERON:0006595,2.57e-08,118;UBERON:0001007,8.79e-08,116;UBERON:0001555,8.79e-08,116;UBERON:0007026,8.79e-08,116;UBERON:0007023,1.89e-07,51 | |||
|phase1_expression=0.160148847104794,6.97950815278722,6.3699893514535,8.46899791659124,13.023288978605,3.3575854382378,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,1.83527424853736,4.59385571292016,3.01533397311352,3.44753972297422,3.42042155021473,3.78045194639896,0.665191531965914,0,0,0,3.75507105676657,0.831173226792462,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,3.72783522436244,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,2.27450482590307,0.631325567659422,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,2.089512999133,4.11564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,5.94753809370836,2.90895623329899,0,0,0,0,0,0.190225626112559,4.2707615539006,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,8.98819408654222,2.37751854862164,1.39398891278057,0,0,0,0,0,0.280543279561274,0.505892296994058,1.03327103585722,1.41298855057237,0.740382983530803,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0,0.532020700926821,0.178368817602071,0,0,0.23467170806371,3.60114520468494,0.661585194164886,10.7176064411962,6.29711264114032,6.21223126760005,10.2660215842697,20.6817533678777,1.7488850197791,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,1.04544148007234,1.52853794622324,1.48350781023303,0.991841468704031,3.40282724579238,1.03691978633434,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0,0,0,0.360586348559907,0,0.201932899896295,0,0,0.194915761479505,0,0.116876902181569,7.02864189207155,0,0.0897138566094757,0,3.09103350451505,0,0.915758121336325,9.4322086794789,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.735994600671987,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0,0.77468420592983,2.12197272079256,0.999242311751784,1.40358965067245,0.859484216193193,0.191288332068843,1.10295709559758,0.231867835620421 | |phase1_expression=0.160148847104794,6.97950815278722,6.3699893514535,8.46899791659124,13.023288978605,3.3575854382378,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,1.83527424853736,4.59385571292016,3.01533397311352,3.44753972297422,3.42042155021473,3.78045194639896,0.665191531965914,0,0,0,3.75507105676657,0.831173226792462,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,3.72783522436244,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,2.27450482590307,0.631325567659422,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,2.089512999133,4.11564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,5.94753809370836,2.90895623329899,0,0,0,0,0,0.190225626112559,4.2707615539006,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,8.98819408654222,2.37751854862164,1.39398891278057,0,0,0,0,0,0.280543279561274,0.505892296994058,1.03327103585722,1.41298855057237,0.740382983530803,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0,0.532020700926821,0.178368817602071,0,0,0.23467170806371,3.60114520468494,0.661585194164886,10.7176064411962,6.29711264114032,6.21223126760005,10.2660215842697,20.6817533678777,1.7488850197791,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,1.04544148007234,1.52853794622324,1.48350781023303,0.991841468704031,3.40282724579238,1.03691978633434,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0,0,0,0.360586348559907,0,0.201932899896295,0,0,0.194915761479505,0,0.116876902181569,7.02864189207155,0,0.0897138566094757,0,3.09103350451505,0,0.915758121336325,9.4322086794789,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.735994600671987,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0,0.77468420592983,2.12197272079256,0.999242311751784,1.40358965067245,0.859484216193193,0.191288332068843,1.10295709559758,0.231867835620421 | ||
|short_description=p4@Lnx1 | |short_description=p4@Lnx1 | ||
}} | }} |
Latest revision as of 05:22, 26 September 2015
Short description: | p4@Lnx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lnx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:728 |
Association with transcript: | -42bp_to_ENSMUST00000117388_5end |
EntrezGene: | Lnx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.52e-13 | 9 |
epithelial cell of alimentary canal | 4.52e-13 | 9 |
brush border epithelial cell | 8.21e-12 | 6 |
gut absorptive cell | 8.21e-12 | 6 |
enterocyte | 8.21e-12 | 6 |
columnar/cuboidal epithelial cell | 5.44e-10 | 7 |
epithelial cell | 3.33e-07 | 25 |
endo-epithelial cell | 3.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.39e-19 | 15 |
gastrointestinal system | 1.98e-18 | 47 |
intestine | 7.35e-18 | 31 |
intestinal mucosa | 2.00e-16 | 13 |
wall of intestine | 2.00e-16 | 13 |
gastrointestinal system mucosa | 2.00e-16 | 13 |
epithelium of mucosa | 4.52e-13 | 9 |
gastrointestinal system epithelium | 4.52e-13 | 9 |
intestinal epithelium | 4.52e-13 | 9 |
organ component layer | 1.20e-12 | 24 |
zone of skin | 5.98e-11 | 5 |
skin epidermis | 5.98e-11 | 5 |
skin of body | 5.98e-11 | 5 |
integument | 5.98e-11 | 5 |
surface | 5.98e-11 | 5 |
outer epithelium | 5.98e-11 | 5 |
integumental system | 5.98e-11 | 5 |
enveloping layer of ectoderm | 5.98e-11 | 5 |
simple columnar epithelium | 2.15e-10 | 11 |
surface structure | 5.71e-09 | 22 |
endoderm-derived structure | 2.57e-08 | 118 |
endoderm | 2.57e-08 | 118 |
presumptive endoderm | 2.57e-08 | 118 |
digestive system | 8.79e-08 | 116 |
digestive tract | 8.79e-08 | 116 |
primitive gut | 8.79e-08 | 116 |
adult organism | 1.89e-07 | 51 |