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FFCP PHASE1:Mm9::chr11:96325901..96325951,+: Difference between revisions

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{{FFCP|EntrezGene=78473|HGNC=|MCL_coexpression_id=33|UniProt=Q3UUV5,Q3U5H2,B1AQX1,A2A881,Q3V3I1,A8Y5F1,A8Y5F0,B2RWZ1,B1AQX5|association_with_transcript=0bp_to_ENSMUST00000071510,ENSMUST00000100519,ENSMUST00000100521,ENSMUST00000103154,ENSMUST00000107662,ENSMUST00000136836,NM_001033186,NM_001177898,NM_001177899,uc007lca.2,uc007lcb.2,uc007lcc.2,uc007lcd.2,uc007lce.2,uc007lcf.2,uc007lcg.2,uc011ydi.1_5end|description=CAGE_peak_1_at_Skap1_5end|id=chr11:96325901..96325951,+|ontology_enrichment_celltype=CL:0000791!2.57e-07!9;CL:0000789!2.57e-07!9;CL:0002420!2.57e-07!9;CL:0002419!2.57e-07!9;CL:0000790!2.57e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.46e-08,9;CL:0000789,2.46e-08,9;CL:0002420,2.46e-08,9;CL:0002419,2.46e-08,9;CL:0000790,2.46e-08,9;CL:0000624,1.57e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.40e-13!29;UBERON:0003408!1.21e-10!24;UBERON:0002370!3.10e-10!23;UBERON:0000974!3.10e-10!23;UBERON:0004807!3.10e-10!23;UBERON:0005058!3.10e-10!23;UBERON:0003351!3.10e-10!23;UBERON:0009113!3.10e-10!23;UBERON:0003295!3.10e-10!23;UBERON:0009722!3.10e-10!23;UBERON:0005562!3.10e-10!23;UBERON:0007690!3.10e-10!23;UBERON:0006562!3.35e-09!24;UBERON:0001557!3.35e-09!24;UBERON:0001042!3.35e-09!24;UBERON:0008814!3.35e-09!24;UBERON:0009145!3.35e-09!24;UBERON:0002193!2.10e-08!48;UBERON:0001004!2.31e-07!42;UBERON:0002390!2.84e-07!45;UBERON:0003061!2.84e-07!45;UBERON:0000065!5.18e-07!41;UBERON:0002530!7.09e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.60e-16,29;UBERON:0005057,4.60e-16,29;UBERON:0000077,1.20e-13,35;UBERON:0003408,2.81e-13,24;UBERON:0002370,8.56e-13,23;UBERON:0000974,8.56e-13,23;UBERON:0004807,8.56e-13,23;UBERON:0005058,8.56e-13,23;UBERON:0003351,8.56e-13,23;UBERON:0009113,8.56e-13,23;UBERON:0003295,8.56e-13,23;UBERON:0009722,8.56e-13,23;UBERON:0005562,8.56e-13,23;UBERON:0007690,8.56e-13,23;UBERON:0002193,2.89e-12,48;UBERON:0002405,2.89e-12,48;UBERON:0006562,7.98e-12,24;UBERON:0001557,7.98e-12,24;UBERON:0001042,7.98e-12,24;UBERON:0008814,7.98e-12,24;UBERON:0009145,7.98e-12,24;UBERON:0002390,8.36e-11,45;UBERON:0003061,8.36e-11,45;UBERON:0001004,7.58e-10,42;UBERON:0000065,2.08e-09,41;UBERON:0000072,2.13e-09,27;UBERON:0002530,4.77e-08,65|phase1_expression=0,0,0,0,0,0,0,266.25229293653,96.2994859517401,101.115875371101,50.6805185947495,39.4074465436962,335.553430665163,341.726353055861,6.32908547449759,8.90891176515234,0.699561878128147,31.0730232877864,31.8105485965314,18.2487550273153,10.3752813984305,0,0,2.87986361028132,4.35877634027623,0,0,0.215471232685889,2.28028103347649,4.03248207615889,0.886922042621219,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,1.34226084846189,325.687601763094,280.302228484815,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,1.54607978666129,0.122490799214954,0.287536413054709,0,1.10115880999389,0.766124028511126,1.38245879930619,0.791317726381163,0.731901148819277,0.52091337055676,0.279182999001381,2.25105044012672,2.29197371665215,0,0.427115042397309,0.559198337475902,3.18050011999373,0,0,0.860423876981386,0,0,0,0,7.02222100658759,0,0,0,0,0,0,0,0,0,0,8.79215873836762,131.79938277641,9.05497048295431,4.51061849591953,1.82679286987285,2.99800146432876,1.80867168663147,2.58695155698551,3.14166478324189,0,3.03658649531814,5.30766331169925,0,1.54589062922275,1.45462575940567,0,0,0,5.10914110417183,0,0,0,0.299581278809645,0.457500602818626,1.00523481690292,0.695297280769106,1.53429274398198,1.66230435647648,0.162241263067758,0.611036183101898,2.36373244159177,1.0108910337347,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0.703578179943289,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0,2.33530684734339,0,1.97000956894914,1.62137619091711,3.36259971078264,1.75640092232841,1.74468344388483,0.841159794256509,0.308713837137853,13.2167513193519,1.32225283331772,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0.444756087689741,0.570676878337677,4.74529061544512,0.164698954724011,2.76468729680296,2.98434708061726,2.53453313254856,1.79763881730844,1.29682829924817,2.58883655230677,3.41402221715547,3.42745537829186,1.1270773567308,3.05476991767971,1.55161989734101,2.24434623649019,0.885311519739602,1.18088118383682,0.31399745568275,0.863780147452604,1.48226313543574,0.333690211432188,0,0,0,0.241177159752417,0,0.287696137450811,0,0.823684239564244,0,4.09355042435354,2.18426371180192,2.02063102357689,0.896987067609561,0.482443521363367,14.2259956428286,0.37898282354097,0,0,0,6.19773152534718,0.238043640886014,0.975668239288994,2.36452716159286,2.6575762757853,3.98636921643718,8.1931657357869,11.569893785015,6.07526046042349,0,0,6.39293554924747,5.79467167239938,1.284404719902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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78473
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=Q3UUV5,Q3U5H2,B1AQX1,A2A881,Q3V3I1,A8Y5F1,A8Y5F0,B2RWZ1,B1AQX5
|association_with_transcript=0bp_to_ENSMUST00000071510,ENSMUST00000100519,ENSMUST00000100521,ENSMUST00000103154,ENSMUST00000107662,ENSMUST00000136836,NM_001033186,NM_001177898,NM_001177899,uc007lca.2,uc007lcb.2,uc007lcc.2,uc007lcd.2,uc007lce.2,uc007lcf.2,uc007lcg.2,uc011ydi.1_5end
|cluster_id=chr11:96325901..96325951,+
|description=CAGE_peak_1_at_Skap1_5end
|id=chr11:96325901..96325951,+
|ontology_enrichment_celltype=CL:0000791!2.57e-07!9;CL:0000789!2.57e-07!9;CL:0002420!2.57e-07!9;CL:0002419!2.57e-07!9;CL:0000790!2.57e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,2.46e-08,9;CL:0000789,2.46e-08,9;CL:0002420,2.46e-08,9;CL:0002419,2.46e-08,9;CL:0000790,2.46e-08,9;CL:0000624,1.57e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.40e-13!29;UBERON:0003408!1.21e-10!24;UBERON:0002370!3.10e-10!23;UBERON:0000974!3.10e-10!23;UBERON:0004807!3.10e-10!23;UBERON:0005058!3.10e-10!23;UBERON:0003351!3.10e-10!23;UBERON:0009113!3.10e-10!23;UBERON:0003295!3.10e-10!23;UBERON:0009722!3.10e-10!23;UBERON:0005562!3.10e-10!23;UBERON:0007690!3.10e-10!23;UBERON:0006562!3.35e-09!24;UBERON:0001557!3.35e-09!24;UBERON:0001042!3.35e-09!24;UBERON:0008814!3.35e-09!24;UBERON:0009145!3.35e-09!24;UBERON:0002193!2.10e-08!48;UBERON:0001004!2.31e-07!42;UBERON:0002390!2.84e-07!45;UBERON:0003061!2.84e-07!45;UBERON:0000065!5.18e-07!41;UBERON:0002530!7.09e-07!65
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.60e-16,29;UBERON:0005057,4.60e-16,29;UBERON:0000077,1.20e-13,35;UBERON:0003408,2.81e-13,24;UBERON:0002370,8.56e-13,23;UBERON:0000974,8.56e-13,23;UBERON:0004807,8.56e-13,23;UBERON:0005058,8.56e-13,23;UBERON:0003351,8.56e-13,23;UBERON:0009113,8.56e-13,23;UBERON:0003295,8.56e-13,23;UBERON:0009722,8.56e-13,23;UBERON:0005562,8.56e-13,23;UBERON:0007690,8.56e-13,23;UBERON:0002193,2.89e-12,48;UBERON:0002405,2.89e-12,48;UBERON:0006562,7.98e-12,24;UBERON:0001557,7.98e-12,24;UBERON:0001042,7.98e-12,24;UBERON:0008814,7.98e-12,24;UBERON:0009145,7.98e-12,24;UBERON:0002390,8.36e-11,45;UBERON:0003061,8.36e-11,45;UBERON:0001004,7.58e-10,42;UBERON:0000065,2.08e-09,41;UBERON:0000072,2.13e-09,27;UBERON:0002530,4.77e-08,65
|phase1_expression=0,0,0,0,0,0,0,266.25229293653,96.2994859517401,101.115875371101,50.6805185947495,39.4074465436962,335.553430665163,341.726353055861,6.32908547449759,8.90891176515234,0.699561878128147,31.0730232877864,31.8105485965314,18.2487550273153,10.3752813984305,0,0,2.87986361028132,4.35877634027623,0,0,0.215471232685889,2.28028103347649,4.03248207615889,0.886922042621219,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,1.34226084846189,325.687601763094,280.302228484815,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,1.54607978666129,0.122490799214954,0.287536413054709,0,1.10115880999389,0.766124028511126,1.38245879930619,0.791317726381163,0.731901148819277,0.52091337055676,0.279182999001381,2.25105044012672,2.29197371665215,0,0.427115042397309,0.559198337475902,3.18050011999373,0,0,0.860423876981386,0,0,0,0,7.02222100658759,0,0,0,0,0,0,0,0,0,0,8.79215873836762,131.79938277641,9.05497048295431,4.51061849591953,1.82679286987285,2.99800146432876,1.80867168663147,2.58695155698551,3.14166478324189,0,3.03658649531814,5.30766331169925,0,1.54589062922275,1.45462575940567,0,0,0,5.10914110417183,0,0,0,0.299581278809645,0.457500602818626,1.00523481690292,0.695297280769106,1.53429274398198,1.66230435647648,0.162241263067758,0.611036183101898,2.36373244159177,1.0108910337347,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0.703578179943289,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0,2.33530684734339,0,1.97000956894914,1.62137619091711,3.36259971078264,1.75640092232841,1.74468344388483,0.841159794256509,0.308713837137853,13.2167513193519,1.32225283331772,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0.444756087689741,0.570676878337677,4.74529061544512,0.164698954724011,2.76468729680296,2.98434708061726,2.53453313254856,1.79763881730844,1.29682829924817,2.58883655230677,3.41402221715547,3.42745537829186,1.1270773567308,3.05476991767971,1.55161989734101,2.24434623649019,0.885311519739602,1.18088118383682,0.31399745568275,0.863780147452604,1.48226313543574,0.333690211432188,0,0,0,0.241177159752417,0,0.287696137450811,0,0.823684239564244,0,4.09355042435354,2.18426371180192,2.02063102357689,0.896987067609561,0.482443521363367,14.2259956428286,0.37898282354097,0,0,0,6.19773152534718,0.238043640886014,0.975668239288994,2.36452716159286,2.6575762757853,3.98636921643718,8.1931657357869,11.569893785015,6.07526046042349,0,0,6.39293554924747,5.79467167239938,1.28440471990234,1.17211686592203,0,0.757412781613119,0,0.780877488593277,0.215423397732799,0,0,0,0,0.292255857911312,0,1.28528526568723,1.41940085208269,0.534196811001766,0.162886959353576,2.47455184458803,1.32745138339963,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,1.22974059177571,1.29214146584111,2.90826983582004,3.56497378384721,5.05658812697306,2.10837217149998,1.03135543248187,0.680879211507576,2.52085531643834,3.36332577835162,3.00071849044229,2.12808280370728,1.24858172321449,0.987294123612726,0.304464949114599,0.23467170806371,0,1.7642271844397,1.15420377059036,0.322928853391811,0.361877549568935,0.358117032009409,0.492422699235184,2.33184669303881,0.556275906031529,16.5744754373917,2.88941615148511,2.77791791054568,7.15800136617826,19.2738861086645,20.132479242174,0.339956859987711,0,0.552799895217695,0,0.158167996790568,1.21991680276109,0.324016022465404,0.418176592028937,0,0.134864346384821,1.40510874733071,1.57053565190418,1.42576470620972,4.34937519160848,0,0,0,0.777804753376191,1.93739735216597,1.18269287843545,0.821500670520278,0.651021924219751,0.734015410979976,0.241584120826006,0,270.505519257721,12.7716885632803,37.7976322366564,80.8107518921885,120.84301957555,151.991236407668,207.817932220026,210.162197169423,215.765303539191,231.82110584451,248.637372547449,254.852358134453,260.060607953811,298.386731269546,0,0,0,0,2.12508553435409,1.68914227906064,1.46521299413812,1.2862102744744,39.6241962187937,1.6942555278512,0.920650473014354,1.14579102687879,2.40594455281163,2.05524755931193,1.5107877947794,1.35004500046361,2.2516060161211,2.71885445390523,1.55328093525546,0.31136204275253,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,1.10306105070008,1.77797382241292,1.44224540067226,2.56735367673452,2.52697211763797,0.760437899670719,1.13175804831646,1.31098110457835,0.960377286073039,0.918967503289812,1.90517476513229,1.15884325944855,2.50781986602817,0.824171801606613,1.03039244094078,1.37147700954166,0.70990322463735,0.953744759789284,1.0174249164263,1.12931256498397,1.26921911837515,1.64635175585495,0.789209134313529,1.22223702461276,1.68342681497322,1.18635018124174,2.06859412988683,1.63692417267876,0.77468420592983,2.3148793317737,1.24905288968973,2.8071793013449,1.50409737833809,0.382576664137687,1.32354851471709,1.39120701372253
|short_description=p1@Skap1
}}

Latest revision as of 01:38, 26 September 2015

Short description:p1@Skap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Skap1_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_ENSMUST00000071510, ENSMUST00000100519, ENSMUST00000100521, ENSMUST00000103154, ENSMUST00000107662, ENSMUST00000136836, NM_001033186, NM_001177898, NM_001177899, uc007lca.2, uc007lcb.2, uc007lcc.2, uc007lcd.2, uc007lce.2, uc007lcf.2, uc007lcg.2, uc011ydi.1_5end
EntrezGene:Skap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Skap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9266.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E796.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2101.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E650.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F139.41
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4335.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8341.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.91
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.07
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A431.81
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9325.69
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1280.30
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D93.18
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.79
accessory axillary lymph node, adult.CNhs10475.1063-29H9131.80
adrenal gland, adult.CNhs10508.49-24D79.05
adrenal gland, embryo E14.CNhs11038.406-44C54.51
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A66.20
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A48.19
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G216.57
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H119.27
spleen, neonate N25.CNhs11099.1354-25G320.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B5270.51
thymus, embryo E14.CNhs11041.402-44I412.77
thymus, embryo E15.CNhs11005.430-45I237.80
thymus, embryo E16.CNhs11002.456-26C580.81
thymus, embryo E17.CNhs10581.478-18C1120.84
thymus, embryo E18.CNhs10595.1273-19G4151.99
thymus, neonate N02.CNhs11181.1541-43F8207.82
thymus, neonate N03.CNhs11137.2104-43C7210.16
thymus, neonate N06.CNhs11197.681-26C4215.77
thymus, neonate N07.CNhs11211.713-19D3231.82
thymus, neonate N10.CNhs11194.748-24E4248.64
thymus, neonate N20.CNhs11186.820-7A2254.85
thymus, neonate N25.CNhs11125.1362-25G7260.06
thymus, neonate N30.CNhs11132.1393-42G2298.39
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F839.62
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.46e-089
alpha-beta T cell2.46e-089
immature T cell2.46e-089
mature T cell2.46e-089
immature alpha-beta T cell2.46e-089
CD4-positive, alpha-beta T cell1.57e-078

Uber anatomy
Ontology termp-valuen
hemopoietic organ4.60e-1629
immune organ4.60e-1629
mixed endoderm/mesoderm-derived structure1.20e-1335
gland of gut2.81e-1324
thymus8.56e-1323
neck8.56e-1323
respiratory system epithelium8.56e-1323
hemolymphoid system gland8.56e-1323
pharyngeal epithelium8.56e-1323
thymic region8.56e-1323
pharyngeal gland8.56e-1323
entire pharyngeal arch endoderm8.56e-1323
thymus primordium8.56e-1323
early pharyngeal endoderm8.56e-1323
hemolymphoid system2.89e-1248
immune system2.89e-1248
pharynx7.98e-1224
upper respiratory tract7.98e-1224
chordate pharynx7.98e-1224
pharyngeal arch system7.98e-1224
pharyngeal region of foregut7.98e-1224
hematopoietic system8.36e-1145
blood island8.36e-1145
respiratory system7.58e-1042
respiratory tract2.08e-0941
segment of respiratory tract2.13e-0927
gland4.77e-0865
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