FFCP PHASE1:Mm9::chr11:96160098..96160112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15414 | |EntrezGene=15414 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=249 | |MCL_coexpression_id=249 | ||
|TSSclassifier=NA | |||
|UniProt=P09023 | |UniProt=P09023 | ||
|association_with_transcript=-156bp_to_ENSMUST00000000704_5end | |association_with_transcript=-156bp_to_ENSMUST00000000704_5end | ||
|cluster_id=chr11:96160098..96160112,+ | |||
|description=CAGE_peak_8_at_Hoxb6_5end | |description=CAGE_peak_8_at_Hoxb6_5end | ||
|id=chr11:96160098..96160112,+ | |id=chr11:96160098..96160112,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.09e-38,3;CL:0002611,5.70e-26,2;CL:0000117,4.90e-14,23;CL:0000337,4.90e-14,23;CL:0000540,7.02e-10,33;CL:0000047,7.02e-10,33;CL:0000031,7.02e-10,33;CL:0000404,7.02e-10,33;CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39;CL:0002319,1.22e-07,43;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!7.54e-15!21;UBERON:0002240!1.53e-09!6;UBERON:0005174!1.53e-09!6;UBERON:0001137!1.53e-09!6;UBERON:0001948!7.12e-09!5;UBERON:0002315!7.12e-09!5;UBERON:0002113!1.59e-08!14;UBERON:0003918!1.59e-08!14;UBERON:0005095!1.59e-08!14;UBERON:0007687!1.59e-08!14;UBERON:0002342!3.20e-08!10;UBERON:0005062!3.20e-08!10;UBERON:0006554!3.79e-07!16 | |ontology_enrichment_uberon=UBERON:0000489!7.54e-15!21;UBERON:0002240!1.53e-09!6;UBERON:0005174!1.53e-09!6;UBERON:0001137!1.53e-09!6;UBERON:0001948!7.12e-09!5;UBERON:0002315!7.12e-09!5;UBERON:0002113!1.59e-08!14;UBERON:0003918!1.59e-08!14;UBERON:0005095!1.59e-08!14;UBERON:0007687!1.59e-08!14;UBERON:0002342!3.20e-08!10;UBERON:0005062!3.20e-08!10;UBERON:0006554!3.79e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,8.93e-63,5;UBERON:0002315,8.93e-63,5;UBERON:0002240,1.99e-52,6;UBERON:0005174,1.99e-52,6;UBERON:0001137,1.99e-52,6;UBERON:0002257,2.09e-38,3;UBERON:0000489,3.30e-29,21;UBERON:0003076,1.66e-26,12;UBERON:0003057,1.66e-26,12;UBERON:0002256,5.70e-26,2;UBERON:0003103,2.01e-14,43;UBERON:0000998,2.06e-13,1;UBERON:0007194,2.06e-13,1;UBERON:0006868,2.06e-13,1;UBERON:0000080,3.67e-13,4;UBERON:0005904,3.67e-13,4;UBERON:0006947,3.67e-13,4;UBERON:0002120,3.67e-13,4;UBERON:0004054,3.67e-13,4;UBERON:0004875,3.67e-13,4;UBERON:0004876,3.67e-13,4;UBERON:0005721,3.67e-13,4;UBERON:0005754,3.67e-13,4;UBERON:0007297,3.67e-13,4;UBERON:0002020,1.35e-09,34;UBERON:0000058,6.16e-08,7;UBERON:0010147,2.35e-07,2;UBERON:0003937,2.35e-07,2;UBERON:0005399,2.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.912392380975631,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,2.87129103237098,0,0,0,0,0,0,0,0,0,0,0,0,2.65165726926301,3.84403538157578,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0.608930956624282,0,0.60289056221049,0.23517741427141,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.622034853050465,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.814605311381257,0.581857461502877,0.350679099451593,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.937693492737625,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0,0,0,0,0.876767573733936,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.912392380975631,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,2.87129103237098,0,0,0,0,0,0,0,0,0,0,0,0,2.65165726926301,3.84403538157578,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0.608930956624282,0,0.60289056221049,0.23517741427141,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.622034853050465,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.814605311381257,0.581857461502877,0.350679099451593,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.937693492737625,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0,0,0,0,0.876767573733936,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p8@Hoxb6 | |short_description=p8@Hoxb6 | ||
}} | }} |
Latest revision as of 01:24, 26 September 2015
Short description: | p8@Hoxb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Hoxb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -156bp_to_ENSMUST00000000704_5end |
EntrezGene: | Hoxb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.09e-38 | 3 |
neuron of the dorsal spinal cord | 5.70e-26 | 2 |
CNS neuron (sensu Vertebrata) | 4.90e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.90e-14 | 23 |
neuron | 7.02e-10 | 33 |
neuronal stem cell | 7.02e-10 | 33 |
neuroblast | 7.02e-10 | 33 |
electrically signaling cell | 7.02e-10 | 33 |
electrically responsive cell | 2.12e-08 | 39 |
electrically active cell | 2.12e-08 | 39 |
neural cell | 1.22e-07 | 43 |
ectodermal cell | 1.80e-07 | 44 |
neurectodermal cell | 1.80e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 8.93e-63 | 5 |
gray matter of spinal cord | 8.93e-63 | 5 |
spinal cord | 1.99e-52 | 6 |
dorsal region element | 1.99e-52 | 6 |
dorsum | 1.99e-52 | 6 |
ventral horn of spinal cord | 2.09e-38 | 3 |
cavitated compound organ | 3.30e-29 | 21 |
posterior neural tube | 1.66e-26 | 12 |
chordal neural plate | 1.66e-26 | 12 |
dorsal horn of spinal cord | 5.70e-26 | 2 |
compound organ | 2.01e-14 | 43 |
seminal vesicle | 2.06e-13 | 1 |
vesicular gland | 2.06e-13 | 1 |
seminal fluid secreting gland | 2.06e-13 | 1 |
mesonephros | 3.67e-13 | 4 |
duct of male reproductive system | 3.67e-13 | 4 |
male genital duct | 3.67e-13 | 4 |
pronephros | 3.67e-13 | 4 |
internal male genitalia | 3.67e-13 | 4 |
nephrogenic cord | 3.67e-13 | 4 |
urogenital ridge | 3.67e-13 | 4 |
pronephric mesoderm | 3.67e-13 | 4 |
rostral part of nephrogenic cord | 3.67e-13 | 4 |
presumptive pronephric mesoderm | 3.67e-13 | 4 |
gray matter | 1.35e-09 | 34 |
duct | 6.16e-08 | 7 |
male accessory sex gland | 2.35e-07 | 2 |
sex gland | 2.35e-07 | 2 |
male reproductive gland | 2.35e-07 | 2 |