FFCP PHASE1:Mm9::chr11:96145362..96145389,+: Difference between revisions
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{{FFCP|EntrezGene=15415|HGNC=|MCL_coexpression_id=249|UniProt=P09024|association_with_transcript=-181bp_to_ENSMUST00000049352_5end|description=CAGE_peak_4_at_Hoxb7_5end|id=chr11:96145362..96145389,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.08e-10,3;CL:0000107,4.91e-08,9;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0002611,2.66e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!6.59e-15!21;UBERON:0002113!4.74e-09!14;UBERON:0003918!4.74e-09!14;UBERON:0005095!4.74e-09!14;UBERON:0007687!4.74e-09!14;UBERON:0002342!5.76e-09!10;UBERON:0005062!5.76e-09!10;UBERON:0001008!6.88e-09!17;UBERON:0006554!1.71e-08!16;UBERON:0002240!3.73e-07!6;UBERON:0005174!3.73e-07!6;UBERON:0001137!3.73e-07!6;UBERON:0003064!7.72e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.81e-22,21;UBERON:0002240,4.46e-19,6;UBERON:0005174,4.46e-19,6;UBERON:0001137,4.46e-19,6;UBERON:0001948,2.34e-16,5;UBERON:0002315,2.34e-16,5;UBERON:0002257,1.08e-10,3;UBERON:0010313,5.39e-10,3;UBERON:0002342,5.39e-10,3;UBERON:0002005,5.39e-10,3;UBERON:0005428,5.39e-10,3;UBERON:0005062,5.39e-10,3;UBERON:0002113,1.19e-09,14;UBERON:0003918,1.19e-09,14;UBERON:0011143,1.19e-09,14;UBERON:0005095,1.19e-09,14;UBERON:0007687,1.19e-09,14;UBERON:0003103,1.48e-09,43;UBERON:0003076,3.53e-09,12;UBERON:0003057,3.53e-09,12;UBERON:0002410,4.91e-08,9;UBERON:0002256,2.66e-07,2;UBERON:0006554,2.73e-07,18;UBERON:0001008,7.41e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.917733760808408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71346279724945,2.87129103237098,0,0,0,0,0,0,0,0,0,0,0,0,5.30331453852602,5.12538050876771,11.5567656411686,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.593768556259299,1.38788261412909,0.913396434936424,0.922461989024234,0.60289056221049,1.99900802130698,1.50799909595611,0.494389935468748,0.578397427679647,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.622034853050465,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,2.32236671860439,1.28867461322093,0.605050573870028,1.11189021922435,0.951128130562796,0,0.658795818896044,0.251335208800269,0.596869416123452,0.58489226135736,0,0,0,4.36236172192088,2.05647322697512,3.38123207019241,1.4255592949172,1.16371492300575,1.75339549725796,0.948548056863859,0.590440591918409,0.31399745568275,0.616985819609003,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0,0.335012514883631,0,0,0,0,0.318909537314974,0,0,0,0,0,0.983528546038072,0,0.481651769963376,0.35163505977661,0,0,2.52406575533005,2.73307121007647,4.52389135238878,0,0.222798674082394,0.283076530788832,1.21443210502468,1.16902343164525,0.395287777946524,0,0,0.534196811001766,0.488660878060728,0.824850614862677,0,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,1.15420377059036,0.484393280087717,0.241251699712623,0.358117032009409,0.492422699235184,0,2.59595422814714,0,0,0.740778109478847,0,0,0,0,0,0,0,2.21435195506795,0.406638934253697,0.216010681643603,0.209088296014469,0.655087691238533,0.269728692769641,0.578574190077352,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,0.798049746802062,1.36586884603307,0.243106717068294,0.419226325255965,0.183843508450014,1.11123363900808,0.824140228955577,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.468207537349412,0.384150914429216,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0,0,0.789209134313529,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p4@Hoxb7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15415 | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=P09024 | |||
|association_with_transcript=-181bp_to_ENSMUST00000049352_5end | |||
|cluster_id=chr11:96145362..96145389,+ | |||
|description=CAGE_peak_4_at_Hoxb7_5end | |||
|id=chr11:96145362..96145389,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.08e-10,3;CL:0000107,4.91e-08,9;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0002611,2.66e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!6.59e-15!21;UBERON:0002113!4.74e-09!14;UBERON:0003918!4.74e-09!14;UBERON:0005095!4.74e-09!14;UBERON:0007687!4.74e-09!14;UBERON:0002342!5.76e-09!10;UBERON:0005062!5.76e-09!10;UBERON:0001008!6.88e-09!17;UBERON:0006554!1.71e-08!16;UBERON:0002240!3.73e-07!6;UBERON:0005174!3.73e-07!6;UBERON:0001137!3.73e-07!6;UBERON:0003064!7.72e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.81e-22,21;UBERON:0002240,4.46e-19,6;UBERON:0005174,4.46e-19,6;UBERON:0001137,4.46e-19,6;UBERON:0001948,2.34e-16,5;UBERON:0002315,2.34e-16,5;UBERON:0002257,1.08e-10,3;UBERON:0010313,5.39e-10,3;UBERON:0002342,5.39e-10,3;UBERON:0002005,5.39e-10,3;UBERON:0005428,5.39e-10,3;UBERON:0005062,5.39e-10,3;UBERON:0002113,1.19e-09,14;UBERON:0003918,1.19e-09,14;UBERON:0011143,1.19e-09,14;UBERON:0005095,1.19e-09,14;UBERON:0007687,1.19e-09,14;UBERON:0003103,1.48e-09,43;UBERON:0003076,3.53e-09,12;UBERON:0003057,3.53e-09,12;UBERON:0002410,4.91e-08,9;UBERON:0002256,2.66e-07,2;UBERON:0006554,2.73e-07,18;UBERON:0001008,7.41e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.917733760808408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71346279724945,2.87129103237098,0,0,0,0,0,0,0,0,0,0,0,0,5.30331453852602,5.12538050876771,11.5567656411686,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.593768556259299,1.38788261412909,0.913396434936424,0.922461989024234,0.60289056221049,1.99900802130698,1.50799909595611,0.494389935468748,0.578397427679647,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.622034853050465,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,2.32236671860439,1.28867461322093,0.605050573870028,1.11189021922435,0.951128130562796,0,0.658795818896044,0.251335208800269,0.596869416123452,0.58489226135736,0,0,0,4.36236172192088,2.05647322697512,3.38123207019241,1.4255592949172,1.16371492300575,1.75339549725796,0.948548056863859,0.590440591918409,0.31399745568275,0.616985819609003,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0,0.335012514883631,0,0,0,0,0.318909537314974,0,0,0,0,0,0.983528546038072,0,0.481651769963376,0.35163505977661,0,0,2.52406575533005,2.73307121007647,4.52389135238878,0,0.222798674082394,0.283076530788832,1.21443210502468,1.16902343164525,0.395287777946524,0,0,0.534196811001766,0.488660878060728,0.824850614862677,0,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,1.15420377059036,0.484393280087717,0.241251699712623,0.358117032009409,0.492422699235184,0,2.59595422814714,0,0,0.740778109478847,0,0,0,0,0,0,0,2.21435195506795,0.406638934253697,0.216010681643603,0.209088296014469,0.655087691238533,0.269728692769641,0.578574190077352,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,0.798049746802062,1.36586884603307,0.243106717068294,0.419226325255965,0.183843508450014,1.11123363900808,0.824140228955577,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.468207537349412,0.384150914429216,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0,0,0.789209134313529,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Hoxb7 | |||
}} |
Latest revision as of 01:20, 26 September 2015
Short description: | p4@Hoxb7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hoxb7_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -181bp_to_ENSMUST00000049352_5end |
EntrezGene: | Hoxb7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.08e-10 | 3 |
autonomic neuron | 4.91e-08 | 9 |
neuron | 1.34e-07 | 33 |
neuronal stem cell | 1.34e-07 | 33 |
neuroblast | 1.34e-07 | 33 |
electrically signaling cell | 1.34e-07 | 33 |
neuron of the dorsal spinal cord | 2.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.81e-22 | 21 |
spinal cord | 4.46e-19 | 6 |
dorsal region element | 4.46e-19 | 6 |
dorsum | 4.46e-19 | 6 |
regional part of spinal cord | 2.34e-16 | 5 |
gray matter of spinal cord | 2.34e-16 | 5 |
ventral horn of spinal cord | 1.08e-10 | 3 |
neural crest-derived structure | 5.39e-10 | 3 |
neural crest | 5.39e-10 | 3 |
enteric nervous system | 5.39e-10 | 3 |
vagal neural crest | 5.39e-10 | 3 |
neural fold | 5.39e-10 | 3 |
kidney | 1.19e-09 | 14 |
kidney mesenchyme | 1.19e-09 | 14 |
upper urinary tract | 1.19e-09 | 14 |
kidney rudiment | 1.19e-09 | 14 |
kidney field | 1.19e-09 | 14 |
compound organ | 1.48e-09 | 43 |
posterior neural tube | 3.53e-09 | 12 |
chordal neural plate | 3.53e-09 | 12 |
autonomic nervous system | 4.91e-08 | 9 |
dorsal horn of spinal cord | 2.66e-07 | 2 |
urinary system structure | 2.73e-07 | 18 |
renal system | 7.41e-07 | 19 |