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FFCP PHASE1:Mm9::chr8:86239090..86239103,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:86239090..86239103,+
|DHSsupport=NA
|short_description=p3@Ddx39
|DPIdataset=NA
|description=CAGE_peak_3_at_Ddx39_5end
|association_with_transcript=14bp_to_ENSMUST00000019576,NM_197982,uc009mla.2,uc009mlb.2_5end
|EntrezGene=68278
|EntrezGene=68278
|HGNC=
|HGNC=
|MCL_coexpression_id=2397
|TSSclassifier=NA
|UniProt=Q8VDW0,Q3TB18
|UniProt=Q8VDW0,Q3TB18
|association_with_transcript=14bp_to_ENSMUST00000019576,NM_197982,uc009mla.2,uc009mlb.2_5end
|cluster_id=chr8:86239090..86239103,+
|description=CAGE_peak_3_at_Ddx39_5end
|id=chr8:86239090..86239103,+
|ontology_enrichment_celltype=CL:0000063!3.29e-12!66;CL:0000988!8.73e-12!32;CL:0002032!8.73e-12!32;CL:0000037!8.73e-12!32;CL:0000566!8.73e-12!32;CL:0000837!8.73e-12!32;CL:0000219!4.11e-10!54;CL:0002320!4.69e-10!46;CL:0000134!4.69e-10!46;CL:0002031!2.00e-09!25;CL:0000838!6.08e-07!12;CL:0000144!8.72e-07!121;CL:0000012!8.72e-07!121
|ontology_enrichment_celltype_v019_2=CL:0000988,6.53e-12,32;CL:0002032,6.53e-12,32;CL:0000037,6.53e-12,32;CL:0000837,6.53e-12,32;CL:0002320,2.34e-10,46;CL:0000134,2.34e-10,46;CL:0000219,2.80e-10,54;CL:0002031,1.73e-09,25;CL:0000838,4.26e-07,12;CL:0000542,7.26e-07,13;CL:0000051,7.26e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.57e-12!48;UBERON:0002405!6.13e-12!70;UBERON:0002390!7.64e-12!45;UBERON:0003061!7.64e-12!45;UBERON:0002384!4.69e-10!46;UBERON:0003929!2.63e-09!55;UBERON:0004177!3.33e-09!29;UBERON:0004119!1.05e-08!130;UBERON:0000925!1.05e-08!130;UBERON:0006595!1.05e-08!130;UBERON:0001007!1.48e-08!128;UBERON:0001555!1.48e-08!128;UBERON:0007026!1.48e-08!128;UBERON:0005057!2.76e-08!51;UBERON:0004921!4.18e-08!126;UBERON:0004185!4.18e-08!126;UBERON:0004923!4.96e-08!24;UBERON:0005911!5.04e-08!69;UBERON:0000490!4.38e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.64e-13,48;UBERON:0002405,2.64e-13,48;UBERON:0002390,1.35e-12,45;UBERON:0003061,1.35e-12,45;UBERON:0004119,6.34e-11,118;UBERON:0000925,6.34e-11,118;UBERON:0006595,6.34e-11,118;UBERON:0001007,9.01e-11,116;UBERON:0001555,9.01e-11,116;UBERON:0007026,9.01e-11,116;UBERON:0002384,2.34e-10,46;UBERON:0004921,2.94e-10,114;UBERON:0004177,4.58e-10,29;UBERON:0005057,4.58e-10,29;UBERON:0003929,7.11e-10,55;UBERON:0000077,1.29e-08,35;UBERON:0005911,2.91e-08,69;UBERON:0004923,5.89e-08,24;UBERON:0000490,2.37e-07,66;UBERON:0002370,2.84e-07,23;UBERON:0000974,2.84e-07,23;UBERON:0004807,2.84e-07,23;UBERON:0005058,2.84e-07,23;UBERON:0003351,2.84e-07,23;UBERON:0009113,2.84e-07,23;UBERON:0003295,2.84e-07,23;UBERON:0009722,2.84e-07,23;UBERON:0005562,2.84e-07,23;UBERON:0007690,2.84e-07,23;UBERON:0000072,3.78e-07,27
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|phase1_expression=0.480446541314382,8.37540978334467,3.63999391511629,12.7034968748869,6.01074875935617,10.5763941304491,9.57811826441655,4.00282302668886,21.8222519335083,14.5120006319636,24.8266053926982,19.3846346358667,5.30722262786738,3.2345548895029,18.6541466616771,16.1980213911861,23.0855419782288,5.0473946457318,4.11343300817216,4.66828616977833,1.44573593256819,7.4468213400664,8.61959304158487,2.71987118748791,6.42345986988076,5.7423196411502,4.73838195774982,4.95583835177545,3.99049180858385,4.28451220591882,8.20402889424627,15.2407361630311,13.5314253268605,15.8481681015439,9.82095507154334,7.14808975041517,15.7210404322024,2.09265815368454,4.6880120671428,6.80580867165938,6.47054636834116,3.41522742479223,5.34061388334269,0.629484089877886,0.101376931219515,0.550640256485045,2.34717403304412,1.52617609466313,1.5378032791413,0.777719596297134,3.3596741190087,4.31257693094915,7.55021727259814,7.97898356212479,7.39406358113421,1.28629718017973,0.85960031981627,2.06268836910977,1.21389876515759,0.528990979272033,0,6.43804610931351,3.55717918444456,1.7997994345628,1.97773272513395,2.8419204597844,1.19840044207362,0.768436610643109,0.414758449233911,0.810035629990144,1.05162480675691,0.856952953211411,0.220868540951614,1.22490799214954,1.24599112323707,3.67687514644008,0,0.255374676170375,0.153606533256243,0.791317726381163,0.548925861614458,1.56274011167028,0,1.12552522006336,0.30559649555362,0.294628585473668,0.284743361598206,0.745597783301202,7.64834552665159,1.66257432234928,5.79728977403356,0,4.0798280022465,2.15881276655127,1.29955283489534,0.448026887097336,1.26399978118577,1.36344258062446,2.07828803682295,1.06001872353102,0.563373679106722,0,0,0,2.81438353314578,5.57391704045217,3.53867111510348,1.1418387971906,3.10725460376606,0,4.3371331691534,2.13125834818499,1.84492397804847,1.05505848386836,0.470354828542819,1.0053327306374,0.741584903203122,0.722996784599558,4.42305275974937,1.45590164952668,2.87093973998512,7.75800405016355,1.86391761218122,0.292780797011547,0.209446706813455,2.29911349687732,4.07371423320129,5.39912457894067,5.97230067243404,0,0,0.376963056338593,0,0,0.20778804455956,0.162241263067758,1.52759045775474,2.36373244159177,0.505445516867349,0.420883711772948,1.43132487258974,2.5289231487682,1.44049703844279,2.56198190320716,1.49680298132921,2.0498195245576,1.49922759295566,0,4.095791865724,1.51284864134255,1.23165786914764,1.09597866213787,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,9.12877143507205,7.97778512055617,7.95657798307659,1.03562886267751,1.64168241986767,1.44049649168812,0.473489471170421,0.590292695242212,0.771335564436891,1.16266972375204,1.3413670069981,0.934122738937356,0.658239399653922,0.985004784474571,0.486412857275134,0.146199987425332,1.09775057645525,0.134206418760372,0.420579897128254,0.411618449517138,0.660837565967596,3.17340679996253,1.91959425481711,2.09013004674395,3.73715637834071,1.81515172161008,2.00140239460383,1.71203063501303,3.32170343081158,1.81168850196412,1.00534083520108,1.39269530428806,2.53453313254856,0.898819408654221,2.37751854862164,2.38969527905241,3.03468641524931,4.11294645395024,1.1270773567308,1.83286195060783,0.775809948670503,0.911765658574141,1.13825766823663,0.442830443938806,0.31399745568275,0.246794327843601,0.592905254174298,12.346537822991,10.4176267409998,10.3436571697033,8.52012509831712,8.20002343158217,5.85639459097266,4.31544206176216,2.2698931748505,3.0201755450689,1.43768206527355,1.48856379067401,0.624075346229121,1.26289438973556,0.896987067609561,0.482443521363367,0.923765950833023,4.16881105895066,2.28150967018836,3.90413697282933,3.28566347603903,1.17254380209271,1.19021820443007,1.17080188714679,1.41871629695572,1.55025282754142,1.59454768657487,1.63863314715738,1.38147985492716,0.723245292907558,1.50791283939272,1.63171705145613,0.983528546038072,0.551873492609465,0.642202359951168,0,3.11476396215683,0.504941854408746,4.41711507182759,4.29482618726302,1.93881057959519,3.10659437338318,2.00518806674155,1.69845918473299,4.04810701674894,1.75353514746787,2.37172666767914,0.321321316421807,1.13552068166615,0.534196811001766,1.14020871547503,0.824850614862677,0,2.6705869977048,4.23252979750651,1.69744571780308,0.590603785761546,0.307435147943927,1.29214146584111,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,0,0,1.98067203434441,1.29358683782755,0.857348140126369,0,0.178368817602071,0.493647061806363,0.913394847343798,2.81606049676452,1.69465656691056,1.10264199027481,0.65954501176592,0.968786560175433,1.14594557363496,1.19372344003136,2.1338316966858,3.78925087618806,0,10.7648654902647,3.30218988741156,8.33375373163703,12.0555812483002,9.84198439591381,7.54967971581525,2.88963330989554,3.77868921273877,4.42239916174156,3.81868247206045,1.89801596148681,1.82987520414164,2.70013352054503,2.71814784818809,0.87345025498471,1.75323650300267,0.826534557253359,1.04702376793612,2.07383957266869,0.621339313086926,2.81846469342095,1.94371509857172,1.98550188548517,1.55560950675238,1.93739735216597,1.35164900392623,1.87771581833206,1.8228613878153,2.72634295506848,4.59009829569411,2.30424005006292,8.84831137758899,6.28448167399509,5.44368072973584,8.31493267057888,7.87717460936918,4.76835251475036,7.57231331975804,8.4183030489509,7.47151729616292,7.01102621225999,5.64626636766307,5.36018344068638,6.15755786498109,3.3894301632655,0.680191150845634,8.43546622821446,25.0301659940437,13.5986539254904,0.386379188064381,0.93841237725591,2.74727436400898,1.07184189539533,0.501572104035363,0,0,1.14579102687879,0,0,0,0.675022500231806,0,0,0,3.00983307994112,0.798049746802062,2.39027048055788,1.45864030240976,2.09613162627982,1.83843508450014,1.11123363900808,1.23621034343337,0.64183841918363,0.505394423527595,1.2673964994512,0.943131706930381,1.03005658216871,1.08842759088278,1.03383844120104,0.952587382566147,1.27472758539341,1.92909220463705,1.64834360321323,0.883193520806384,1.71434626192708,1.06485483695602,1.90748951957857,1.45346416632329,1.03520318456864,1.01537529470012,1.46342378298218,1.8414879800649,1.22223702461276,2.24456908663095,1.30498519936592,1.28055827088233,2.04615521584845,1.70430525304563,2.3148793317737,0.249810577937946,2.33931608445408,0.429742108096597,0.57386499620653,1.76473135295612,1.85494268496337
|short_description=p3@Ddx39
}}
}}

Latest revision as of 20:47, 25 September 2015

Short description:p3@Ddx39
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ddx39_5end
Coexpression cluster:MCL_coexpression_mm9:2397
Association with transcript: 14bp_to_ENSMUST00000019576, NM_197982, uc009mla.2, uc009mlb.2_5end
EntrezGene:Ddx39
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ddx39

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.62
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.55
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D97.65
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.97
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F812.35
liver, embryo E13.CNhs10524.378-3H610.42
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D78.52
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G210.76
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D112.06
spleen, neonate N20.CNhs11112.824-19H19.84
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I25.44
thymus, embryo E16.CNhs11002.456-26C58.31
thymus, embryo E17.CNhs10581.478-18C17.88
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F87.57
thymus, neonate N03.CNhs11137.2104-43C78.42
thymus, neonate N06.CNhs11197.681-26C47.47
thymus, neonate N07.CNhs11211.713-19D37.01
thymus, neonate N10.CNhs11194.748-24E45.65
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G76.16
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.03
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.60
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.64e-1348
immune system2.64e-1348
hematopoietic system1.35e-1245
blood island1.35e-1245
endoderm-derived structure6.34e-11118
endoderm6.34e-11118
presumptive endoderm6.34e-11118
digestive system9.01e-11116
digestive tract9.01e-11116
primitive gut9.01e-11116
connective tissue2.34e-1046
subdivision of digestive tract2.94e-10114
hemopoietic organ4.58e-1029
immune organ4.58e-1029
gut epithelium7.11e-1055
mixed endoderm/mesoderm-derived structure1.29e-0835
endo-epithelium2.91e-0869
organ component layer5.89e-0824
unilaminar epithelium2.37e-0766
thymus2.84e-0723
neck2.84e-0723
respiratory system epithelium2.84e-0723
hemolymphoid system gland2.84e-0723
pharyngeal epithelium2.84e-0723
thymic region2.84e-0723
pharyngeal gland2.84e-0723
entire pharyngeal arch endoderm2.84e-0723
thymus primordium2.84e-0723
early pharyngeal endoderm2.84e-0723
segment of respiratory tract3.78e-0727
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