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FFCP PHASE1:Mm9::chr16:90284657..90284743,-: Difference between revisions

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(Created page with "{{FFCP |id=chr16:90284657..90284743,- |short_description=p1@Scaf4 |description=CAGE_peak_1_at_Scaf4_5end |association_with_transcript=0bp_to_ENSMUST00000039280,NM_178923,u...")
 
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{{FFCP
{{FFCP
|id=chr16:90284657..90284743,-
|DHSsupport=NA
|short_description=p1@Scaf4
|DPIdataset=NA
|description=CAGE_peak_1_at_Scaf4_5end
|association_with_transcript=0bp_to_ENSMUST00000039280,NM_178923,uc007zwb.1,uc007zwc.1,uc007zwd.1,uc007zwe.1,uc007zwg.1_5end
|EntrezGene=224432
|EntrezGene=224432
|HGNC=
|HGNC=
|MCL_coexpression_id=3067
|TSSclassifier=NA
|UniProt=Q6PFF0,Q7TSH6,Q8BXA9
|UniProt=Q6PFF0,Q7TSH6,Q8BXA9
|association_with_transcript=0bp_to_ENSMUST00000039280,NM_178923,uc007zwb.1,uc007zwc.1,uc007zwd.1,uc007zwe.1,uc007zwg.1_5end
|cluster_id=chr16:90284657..90284743,-
|description=CAGE_peak_1_at_Scaf4_5end
|id=chr16:90284657..90284743,-
|ontology_enrichment_celltype=CL:0000791!3.93e-07!9;CL:0000789!3.93e-07!9;CL:0002420!3.93e-07!9;CL:0002419!3.93e-07!9;CL:0000790!3.93e-07!9;CL:0002031!6.59e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000791,3.93e-07,9;CL:0000789,3.93e-07,9;CL:0002420,3.93e-07,9;CL:0002419,3.93e-07,9;CL:0000790,3.93e-07,9;CL:0002031,6.59e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.53e-14!29;UBERON:0002370!1.50e-12!23;UBERON:0000974!1.50e-12!23;UBERON:0004807!1.50e-12!23;UBERON:0005058!1.50e-12!23;UBERON:0003351!1.50e-12!23;UBERON:0009113!1.50e-12!23;UBERON:0003295!1.50e-12!23;UBERON:0009722!1.50e-12!23;UBERON:0005562!1.50e-12!23;UBERON:0007690!1.50e-12!23;UBERON:0003408!1.82e-12!24;UBERON:0006562!1.41e-11!24;UBERON:0001557!1.41e-11!24;UBERON:0001042!1.41e-11!24;UBERON:0008814!1.41e-11!24;UBERON:0009145!1.41e-11!24;UBERON:0005057!3.32e-11!51;UBERON:0005911!4.12e-10!69;UBERON:0002390!1.21e-09!45;UBERON:0003061!1.21e-09!45;UBERON:0001004!6.83e-09!42;UBERON:0002193!7.61e-09!48;UBERON:0000065!7.95e-09!41;UBERON:0003929!9.05e-09!55;UBERON:0004921!1.53e-08!126;UBERON:0004185!1.53e-08!126;UBERON:0004119!2.98e-08!130;UBERON:0000925!2.98e-08!130;UBERON:0006595!2.98e-08!130;UBERON:0002405!3.57e-08!70;UBERON:0000072!5.29e-08!27;UBERON:0001007!8.53e-08!128;UBERON:0001555!8.53e-08!128;UBERON:0007026!8.53e-08!128;UBERON:0001041!2.19e-07!92;UBERON:0000077!2.21e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.53e-14,29;UBERON:0005057,1.53e-14,29;UBERON:0000077,8.00e-13,35;UBERON:0002370,1.50e-12,23;UBERON:0000974,1.50e-12,23;UBERON:0004807,1.50e-12,23;UBERON:0005058,1.50e-12,23;UBERON:0003351,1.50e-12,23;UBERON:0009113,1.50e-12,23;UBERON:0003295,1.50e-12,23;UBERON:0009722,1.50e-12,23;UBERON:0005562,1.50e-12,23;UBERON:0007690,1.50e-12,23;UBERON:0003408,1.82e-12,24;UBERON:0006562,1.41e-11,24;UBERON:0001557,1.41e-11,24;UBERON:0001042,1.41e-11,24;UBERON:0008814,1.41e-11,24;UBERON:0009145,1.41e-11,24;UBERON:0005911,4.12e-10,69;UBERON:0004921,5.57e-10,114;UBERON:0002390,1.21e-09,45;UBERON:0003061,1.21e-09,45;UBERON:0004119,1.30e-09,118;UBERON:0000925,1.30e-09,118;UBERON:0006595,1.30e-09,118;UBERON:0001007,4.04e-09,116;UBERON:0001555,4.04e-09,116;UBERON:0007026,4.04e-09,116;UBERON:0001041,4.22e-09,80;UBERON:0001004,6.83e-09,42;UBERON:0002193,7.61e-09,48;UBERON:0002405,7.61e-09,48;UBERON:0000065,7.95e-09,41;UBERON:0003929,9.05e-09,55;UBERON:0000072,5.29e-08,27;UBERON:0007811,5.91e-07,36;UBERON:0000153,8.60e-07,43
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94,38.9093272104796,43.3070464980188,35.7497678120162,40.5631294268069,33.6278348169114,28.4563770871972,31.1603528084516,28.2696417342752,35.7737326285348,40.3870553506502,73.2800820289447,31.9965408534115,25.9769830017643,27.8065199331988,23.3779280494693,28.21567295696,31.4517399570621,29.5563953595767,33.9744275939303,49.2831606485052,46.0848010012585,88.7991248965181,33.8551109534574,40.4681171229419,53.1376165979182,76.6234257456821,66.5582538517237,61.660265603744,69.5617672992259,57.1470106706516,74.6064637152448,80.6609481094724,89.2714187576132,78.1240154119475,82.5150929401877,26.7541852665949,45.7291063950573,43.8700758820336,46.6719233492138,33.0354205795046,34.1582105321151,34.2493537379786,35.1564141689668,33.103758866334,32.1908550291728,23.476587061866,30.363462212288,26.2935368985842,23.2928056722018,26.4387864086395,27.0009000092722,25.6683085837806,19.0319811773366,31.0656187051092,34.3536120503625,50.6761589219309,32.0979178817772,43.5161023552246,39.6168877366887,51.476182366004,47.5607997495457,49.4484137373346,61.2955690320367,53.8245061056889,52.4702150772796,50.7404858328545,50.5664140337365,51.6042728383246,56.0570177006785,54.7737744975535,41.1389357104237,49.1918512182448,46.1536208899703,46.2204609222008,34.629794490927,36.3825402626642,41.0110246709392,41.4237287402136,47.4311277293266,43.5765230642134,40.7929379506283,33.6729230640439,36.5313066245368,55.5530848941161,46.979467177173,42.4554319038679,45.0154147486658,45.551431308674,43.4039874707568,32.9749962878089,40.0023050441648,39.3214028908386,34.240611440323,26.4709702943419,25.9691975894872
|phase1_expression=21.1396478178328,41.1790981014446,40.4949323056687,54.7460222465362,63.6137577031861,47.0061961353291,37.1444098546886,65.4655249848792,146.98342592634,169.228652530801,82.1846247482424,99.2365657901985,69.3362956221383,71.7721503859969,53.297561890506,46.1643609648803,46.8706458345858,61.041928996819,60.6045796537365,64.0828374215026,39.8002597907007,44.4823461379966,30.2991755401165,21.5989770771099,21.564472420314,36.1766137392463,32.7379117080897,26.9339040857361,21.852693237483,32.5118867390311,24.1686256614282,53.9776072440687,71.3475153598101,63.3926724061755,27.7297554961224,22.607911768755,33.8921131395533,46.0384793810599,28.9094077473806,32.9819958703493,57.6466858270394,60.1080026763432,40.7828696546169,11.330713617802,14.2941473019516,12.4811791469943,23.4717403304412,15.2617609466313,17.1355222532888,14.9711022287198,17.358316281545,11.5002051491977,50.5025644233786,94.2970784614748,110.910953717013,23.9251275513431,19.1977404758967,24.7522604293172,28.3243045203437,13.7537654610729,20.2826049121977,16.6033820713875,23.1216646988896,35.0960889739746,33.6214563272771,27.7087244828979,25.4660093940644,19.2109152660777,40.0241903510724,32.6714370762691,36.3862183137891,12.8542942981712,16.7860091123226,36.3797673668413,33.8334512694374,30.3342199581307,18.7196997698961,19.7915374032041,19.2008166570304,24.3989632300859,18.9379422256988,19.7947080811569,14.7966989470732,14.6318278608237,17.8773949898868,25.9273155216828,18.2235751422852,18.0807462450542,26.5798938599476,27.8103341192971,33.3344162006929,17.2084775396277,39.4383373550495,22.6675340487883,38.3368086294125,35.8421509677868,28.2293284464821,20.1107780642108,12.9893002301434,12.3668851078619,21.8307300653855,41.0644727725817,81.5376767061266,92.4386714099331,12.7729714196616,16.7217511213565,12.6381111253696,34.0267961562799,213.882691892564,31.0244070645484,32.2682707785013,25.2706346999077,33.9004780966406,24.7185130506301,35.6293782621186,23.625319169979,40.5399747084373,50.8989736358089,46.8843592533433,30.5739346400603,42.8432545813163,39.7597707570882,46.5979403045305,33.9625724533395,20.9446706813455,43.1722423302519,37.7417642193649,20.3966928537759,29.8615033621702,29.8083372415597,32.9400434029411,41.4659361972453,32.8527965163402,24.8043993610421,21.8177446787538,24.8229132493669,33.3014719790534,33.3410681235049,16.6797020566225,36.8273247801329,36.1734831436316,22.9902104433473,35.1121153120431,34.9635177378859,40.6177899933427,34.8469319174791,31.3900777275092,25.3529303324235,40.5267826713743,44.8181409997732,36.7737849502653,28.0570537507296,33.6437171562973,44.5762773148373,37.0407845534298,34.4329281595993,19.6619692447706,22.6466158260949,24.7222244474166,39.1467710092099,30.0193356775803,25.0286265430811,39.2996261071449,37.1884398002593,27.9223474326155,31.1595485965547,30.8514411609562,32.2272344933388,24.6839774870221,18.5509234409378,25.4556061973987,18.1287984407412,23.2723122208514,22.8150911892632,37.0110309472864,35.3991866584738,55.5103555412781,65.0548393992319,32.2065258308203,34.3710274353449,53.9954662939571,51.0259317297057,45.5874989881984,39.9473814836374,40.3349702312835,34.7514794467663,28.4008785944305,29.047644918008,36.0683561170372,50.3338868846364,41.0662294761919,42.6162324764346,36.0369011810855,38.3875002368689,55.2267904798094,36.4535876843113,40.7300223052014,38.5045651197849,34.5271492698445,27.1602672282468,26.5327850051923,22.4582838337677,31.1275258441506,66.0706618635732,53.4640466707912,59.1387355572165,59.8437358096084,50.4060263882551,38.4485036189944,44.3052051674248,45.3978634970099,28.0052641451843,99.2000625038746,26.4220072844637,28.7074659265396,27.025939940341,35.7000852908605,30.3939418458921,43.6017528793187,32.9715056480644,42.5338588513688,39.720350071394,38.9585812158913,52.5969648367301,40.7054625915084,44.8807390072937,39.4087860265477,38.3133913092381,40.9798755449742,41.1296919936502,38.3360659742288,38.7659476998451,16.5870412333199,32.0904353453039,35.8987919303896,40.2867649604909,24.0825884981688,20.1604100938589,14.7541450839008,20.7026160307586,29.0267561862956,29.6733445665445,33.3906266485838,36.0842884908354,40.5493586829957,49.8214694188345,32.7896668356664,26.0107713541068,26.0889933444706,47.2342335140056,35.6269613872754,32.5860054711077,37.6268876106761,42.3973216039416,45.1333470355874,24.7636248878081,31.1393263673694,25.2730806872903,33.9597176812889,32.8955608300002,35.1462478708781,31.9909681940205,26.7373033788541,30.6555655197742,35.8423269154996,37.1287955693473,25.1925308257803,26.6490419166339,29.8818559538163,23.7914108885067,34.7586857938856,26.9336914579127,30.7706668525966,27.4018454203139,45.5263113643598,47.8740480152234,25.8018225724305,97.7775479942977,51.0227588359062,52.1103671379267,40.4672246170633,46.1235928283622,33.8117770490627,27.6283699995659,73.1327369814809,36.3240887615272,53.336023882477,48.0339565361962,67.9370311773495,54.6779833963589,30.596117398894,28.8299991786735,30.8185941583865,37.2321541025894,38.9093272104796,43.3070464980188,35.7497678120162,40.5631294268069,33.6278348169114,28.4563770871972,31.1603528084516,28.2696417342752,35.7737326285348,40.3870553506502,73.2800820289447,31.9965408534115,25.9769830017643,27.8065199331988,23.3779280494693,28.21567295696,31.4517399570621,29.5563953595767,33.9744275939303,49.2831606485052,46.0848010012585,88.7991248965181,33.8551109534574,40.4681171229419,53.1376165979182,76.6234257456821,66.5582538517237,61.660265603744,69.5617672992259,57.1470106706516,74.6064637152448,80.6609481094724,89.2714187576132,78.1240154119475,82.5150929401877,26.7541852665949,45.7291063950573,43.8700758820336,46.6719233492138,33.0354205795046,34.1582105321151,34.2493537379786,35.1564141689668,33.103758866334,32.1908550291728,23.476587061866,30.363462212288,26.2935368985842,23.2928056722018,26.4387864086395,27.0009000092722,25.6683085837806,19.0319811773366,31.0656187051092,34.3536120503625,50.6761589219309,32.0979178817772,43.5161023552246,39.6168877366887,51.476182366004,47.5607997495457,49.4484137373346,61.2955690320367,53.8245061056889,52.4702150772796,50.7404858328545,50.5664140337365,51.6042728383246,56.0570177006785,54.7737744975535,41.1389357104237,49.1918512182448,46.1536208899703,46.2204609222008,34.629794490927,36.3825402626642,41.0110246709392,41.4237287402136,47.4311277293266,43.5765230642134,40.7929379506283,33.6729230640439,36.5313066245368,55.5530848941161,46.979467177173,42.4554319038679,45.0154147486658,45.551431308674,43.4039874707568,32.9749962878089,40.0023050441648,39.3214028908386,34.240611440323,26.4709702943419,25.9691975894872
|short_description=p1@Scaf4
}}
}}

Latest revision as of 19:58, 25 September 2015

Short description:p1@Scaf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scaf4_5end
Coexpression cluster:MCL_coexpression_mm9:3067
Association with transcript: 0bp_to_ENSMUST00000039280, NM_178923, uc007zwb.1, uc007zwc.1, uc007zwd.1, uc007zwe.1, uc007zwg.1_5end
EntrezGene:Scaf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scaf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I541.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I640.49
CD326+ enterocyte, pool1.CNhs13542.11848-124I354.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I463.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I747.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I837.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E965.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7146.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2169.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E682.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F199.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E469.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E871.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A153.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A346.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A546.87
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A261.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A460.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A664.08
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A339.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H244.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I930.30
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.56
GP2+ M cell, pool1.CNhs13228.11845-124H936.18
GP2+ M cell, pool2.CNhs13231.11846-124I132.74
GP2+ M cell, pool3.CNhs13240.11847-124I226.93
Ileum epithelium, pool1.CNhs13199.10252-104B921.85
Ileum epithelium, pool2.CNhs13232.10253-104C132.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I353.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G671.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F527.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F622.61
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G846.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H332.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G957.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H260.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H440.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.26
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A250.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I994.30
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1110.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.93
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.20
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.75
Mouse Granule cells, donor1.CNhs12131.11713-123C328.32
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C735.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.71
Mouse Microglia, donor1.CNhs12629.11718-123C825.47
Mouse Microglia, donor2.CNhs12634.11736-123E819.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D936.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F233.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D630.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D926.58
Mouse Schwann, donor2.CNhs12573.11746-123F927.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C439.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F438.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F635.84
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A728.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H141.06
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I881.54
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B692.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.03
accessory axillary lymph node, adult.CNhs10475.1063-29H9213.88
adrenal gland, adult.CNhs10508.49-24D731.02
adrenal gland, embryo E14.CNhs11038.406-44C532.27
adrenal gland, embryo E16.CNhs11004.1254-43D625.27
adrenal gland, embryo E17.CNhs11043.1263-45I133.90
adrenal gland, embryo E18.CNhs11026.1262-18F524.72
adrenal gland, neonate N00.CNhs11191.1311-23C135.63
adrenal gland, neonate N25.CNhs11223.1377-27I323.63
amnion, adult pregnant day17.5.CNhs10488.583-22A840.54
aorta, adult.CNhs10498.46-23H150.90
bone (os femoris), adult.CNhs10483.56-12G246.88
bone (os femoris), neonate N02.CNhs11227.1985-43F530.57
bone (os femoris), neonate N16.CNhs11225.1525-43A642.84
bone (os femoris), neonate N20.CNhs11195.1350-25C339.76
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B233.96
cerebellum, neonate N30.CNhs11135.1395-42I220.94
colon, adult.CNhs10468.36-18H743.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C737.74
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D120.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.86
corpora quadrigemina, adult.CNhs10501.16-22A429.81
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F141.47
cortex, adult.CNhs10473.12-14D532.85
cortex, neonate N30.CNhs11107.1392-42F224.80
diencephalon, adult.CNhs10482.20-12F221.82
diencephalon, neonate N30.CNhs11201.1388-42B224.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.34
epididymis, adult.CNhs10490.58-23B216.68
eyeball, adult.CNhs10484.31-12G436.83
eyeball, embryo E12.CNhs11016.345-16C636.17
eyeball, embryo E14.CNhs10521.399-16E222.99
eyeball, embryo E15.CNhs10593.426-16C935.11
eyeball, embryo E17.CNhs11023.1261-18D434.96
eyeball, neonate N00.CNhs11207.633-15C640.62
eyeball, neonate N01.CNhs11140.1532-43E734.85
eyeball, neonate N02.CNhs11205.1551-44G831.39
eyeball, neonate N16.CNhs11188.777-19A225.35
forelimb, embryo E11.CNhs10596.335-25E240.53
forelimb, embryo E12.CNhs10600.359-14H244.82
forelimb, embryo E13.CNhs10589.384-1E236.77
forelimb, embryo E14.CNhs10577.413-26A828.06
forelimb, embryo E15.CNhs11007.437-20E733.64
forelimb, embryo E17.CNhs10598.1517-43C444.58
forelimb, embryo E18.CNhs11008.1520-43B537.04
gonad, embryo E13.CNhs11044.1564-45I634.43
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.65
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.72
heart, embryo E11.CNhs10586.331-24E939.15
heart, embryo E12.CNhs11015.353-12F530.02
heart, embryo E13.CNhs11013.376-3I925.03
heart, embryo E14.CNhs10597.403-26D439.30
heart, embryo E15.CNhs11017.431-16C837.19
heart, embryo E16.CNhs11021.457-17C627.92
heart, embryo E17.CNhs11025.479-18E531.16
heart, embryo E18.CNhs11030.1283-20G330.85
heart, neonate N00.CNhs11213.639-21E332.23
heart, neonate N03.CNhs11221.1349-25I224.68
heart, neonate N10.CNhs11118.749-24G118.55
heart, neonate N16.CNhs11209.782-15G125.46
heart, neonate N20.CNhs11127.821-26I618.13
heart, neonate N25.CNhs11196.1351-25D323.27
heart, neonate N30.CNhs11202.1390-42D222.82
hippocampus, adult.CNhs10478.13-16E837.01
hippocampus, neonate N00.CNhs11228.627-43G135.40
intestinal mucosa, adult.CNhs10506.860-29I355.51
intestine, adult.CNhs10496.178-9A365.05
intestine, embryo E12.CNhs11019.1251-16I532.21
intestine, embryo E13.CNhs11010.381-16D534.37
intestine, embryo E15.CNhs10602.976-16D854.00
intestine, embryo E16.CNhs10585.463-22H451.03
intestine, embryo E17.CNhs10582.482-18D345.59
intestine, embryo E18.CNhs10526.1289-20F739.95
intestine, neonate N00.CNhs11126.644-26D140.33
intestine, neonate N01.CNhs11192.1322-23E934.75
intestine, neonate N06.CNhs11102.688-20B828.40
intestine, neonate N07.CNhs11095.720-20F229.05
intestine, neonate N10.CNhs11098.755-23A536.07
intestine, neonate N20.CNhs11187.827-18D150.33
intestine, neonate N25.CNhs11121.1352-25E341.07
intestine, neonate N30.CNhs11131.1384-42G142.62
kidney, embryo E14.CNhs10606.411-4I936.04
kidney, embryo E15.CNhs10997.434-16F838.39
kidney, embryo E16.CNhs10584.464-22A555.23
kidney, embryo E17.CNhs11028.483-18I236.45
kidney, embryo E18.CNhs11001.1288-20C740.73
kidney, neonate N00.CNhs11214.646-21G738.50
kidney, neonate N10.CNhs11206.758-6D534.53
kidney, neonate N20.CNhs11113.832-19I127.16
kidney, neonate N25.CNhs11122.1353-25F326.53
kidney, neonate N30.CNhs11203.1385-42H122.46
liver, adult pregnant day01.CNhs10466.508-5B231.13
liver, embryo E12.CNhs10601.355-15F866.07
liver, embryo E13.CNhs10524.378-3H653.46
liver, embryo E14.CNhs10594.409-16E159.14
liver, embryo E15.CNhs10520.433-16D759.84
liver, embryo E16.CNhs10523.462-17F550.41
liver, embryo E17.CNhs10510.481-18A338.45
liver, embryo E18.CNhs10579.499-43G444.31
liver, neonate N00.CNhs11117.641-24F445.40
liver, neonate N03.CNhs11123.1345-25G228.01
liver, neonate N06.CNhs11101.684-20A899.20
liver, neonate N07.CNhs11103.716-20H226.42
liver, neonate N10.CNhs11115.751-24B928.71
liver, neonate N20.CNhs11220.823-25A327.03
liver, neonate N25.CNhs11198.1368-26H135.70
liver, neonate N30.CNhs11106.1382-42D130.39
lung, adult.CNhs10474.28-22B143.60
lung, embryo E12.CNhs10522.354-16G232.97
lung, embryo E14.CNhs10604.404-26F842.53
lung, embryo E15.CNhs11020.432-17C539.72
lung, embryo E16.CNhs10998.458-17B638.96
lung, embryo E17.CNhs10605.480-44A652.60
lung, embryo E18.CNhs10583.1287-20I640.71
lung, neonate N00.CNhs11224.640-42C644.88
lung, neonate N06.CNhs11212.683-20E539.41
lung, neonate N07.CNhs11111.715-19A338.31
lung, neonate N10.CNhs11219.750-23E640.98
lung, neonate N20.CNhs11109.822-18A441.13
lung, neonate N25.CNhs11119.1359-25C738.34
lung, neonate N30.CNhs11133.1394-42H238.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A132.09
mammary gland, adult lactating day02.CNhs10480.595-22B635.90
mammary gland, adult pregnant day19.CNhs10476.588-5H240.29
medulla oblongata, adult.CNhs10477.17-12C224.08
medulla oblongata, neonate N30.CNhs11200.1396-42A320.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.70
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E229.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E333.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D736.08
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D840.55
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D949.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D432.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.09
olfactory brain, adult.CNhs10489.18-22I947.23
ovary, adult.CNhs10507.91-2I735.63
ovary, embryo E18.CNhs11040.505-44H732.59
ovary, neonate N00.CNhs11217.1299-22I437.63
oviduct, adult pregnant day01.CNhs10500.988-6G642.40
pancreas, adult.CNhs10486.34-16E445.13
pancreas, embryo E14.CNhs11012.405-44F424.76
pancreas, embryo E15.CNhs11042.1556-45F231.14
pancreas, embryo E16.CNhs11003.460-26E525.27
pancreas, embryo E17.CNhs10599.1558-45G333.96
pancreas, embryo E18.CNhs10580.1535-43I732.90
pancreas, neonate N00.CNhs11105.645-26G935.15
pancreas, neonate N01.CNhs11138.1531-43D731.99
pancreas, neonate N02.CNhs11139.1539-43D826.74
pancreas, neonate N16.CNhs11136.787-43B630.66
pancreas, neonate N25.CNhs11094.1555-45E235.84
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G825.19
pituitary gland, embryo E12.CNhs11018.346-16E626.65
pituitary gland, embryo E13.CNhs11009.370-44C729.88
pituitary gland, embryo E14.CNhs11037.398-44A523.79
pituitary gland, embryo E15.CNhs10592.427-16B934.76
pituitary gland, embryo E16.CNhs11036.449-43F626.93
pituitary gland, embryo E17.CNhs11039.1265-44F530.77
pituitary gland, neonate N00.CNhs11190.1308-22E927.40
placenta, adult pregnant day10.CNhs10472.539-13I745.53
placenta, adult pregnant day17.CNhs10464.577-18G347.87
prostate, adult.CNhs10470.859-1F825.80
skin, adult.CNhs10492.30-1C397.78
skin, neonate N00.CNhs11124.650-25G451.02
skin, neonate N03.CNhs11215.662-22H352.11
skin, neonate N06.CNhs11097.693-20I540.47
skin, neonate N10.CNhs11108.762-6C446.12
small intestine, neonate N16.CNhs11114.790-21I133.81
spinal cord, adult.CNhs10505.24-13C927.63
spleen, adult.CNhs10465.25-2G273.13
spleen, embryo E16.CNhs11035.461-43C136.32
spleen, embryo E18.CNhs11011.1271-21F253.34
spleen, neonate N10.CNhs11116.752-24D148.03
spleen, neonate N20.CNhs11112.824-19H167.94
spleen, neonate N25.CNhs11099.1354-25G354.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C928.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D330.82
stomach, adult.CNhs10503.33-1H637.23
stomach, embryo E12.CNhs10588.356-43E338.91
stomach, embryo E15.CNhs10603.1252-16G843.31
stomach, embryo E16.CNhs11022.459-17D435.75
stomach, embryo E17.CNhs11006.1035-18D540.56
stomach, embryo E18.CNhs10999.1286-20C633.63
stomach, neonate N03.CNhs11193.1340-24B828.46
stomach, neonate N07.CNhs11210.718-18A931.16
stomach, neonate N25.CNhs11104.1355-25E428.27
stomach, neonate N30.CNhs11134.1386-42I135.77
submandibular gland, adult.CNhs10469.59-29C140.39
testis, adult.CNhs10504.57-7G573.28
testis, embryo E13.CNhs11031.389-23F532.00
testis, embryo E15.CNhs11034.443-27C525.98
testis, embryo E16.CNhs11033.470-26G527.81
testis, embryo E17.CNhs11029.486-18I523.38
testis, embryo E18.CNhs11027.503-18G528.22
testis, neonate N00.CNhs11189.1300-22B731.45
testis, neonate N07.CNhs11222.726-26I429.56
testis, neonate N10.CNhs11204.763-44D933.97
testis, neonate N20.CNhs11110.839-18H349.28
testis, neonate N30.CNhs11130.1391-42E246.08
thymus, adult.CNhs10471.38-12B588.80
thymus, embryo E14.CNhs11041.402-44I433.86
thymus, embryo E15.CNhs11005.430-45I240.47
thymus, embryo E16.CNhs11002.456-26C553.14
thymus, embryo E17.CNhs10581.478-18C176.62
thymus, embryo E18.CNhs10595.1273-19G466.56
thymus, neonate N02.CNhs11181.1541-43F861.66
thymus, neonate N03.CNhs11137.2104-43C769.56
thymus, neonate N06.CNhs11197.681-26C457.15
thymus, neonate N07.CNhs11211.713-19D374.61
thymus, neonate N10.CNhs11194.748-24E480.66
thymus, neonate N20.CNhs11186.820-7A289.27
thymus, neonate N25.CNhs11125.1362-25G778.12
thymus, neonate N30.CNhs11132.1393-42G282.52
tongue, adult.CNhs10499.32-1B426.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H345.73
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F743.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G546.67
urinary bladder, adult.CNhs10481.879-12E433.04
uterus, adult pregnant day19.CNhs10497.590-15F534.16
uterus, adult.CNhs10509.92-27E534.25
vagina, adult.CNhs10502.89-27D535.16
vesicular gland, adult.CNhs10491.51-27F833.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.07
whole body, embryo E11.CNhs11014.324-5I834.35
whole body, embryo E12.CNhs10587.857-27C950.68
whole body, embryo E13.CNhs10512.372-23H232.10
whole body, embryo E14.5.CNhs10578.420-27D243.52
whole body, embryo E14.CNhs10519.395-14B139.62
whole body, embryo E16.CNhs10514.453-14F251.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G547.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G549.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G561.30
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G553.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G552.47
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G550.74
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G550.57
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G551.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G556.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G554.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G541.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G549.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.15
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G546.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G541.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G541.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G543.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G533.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G536.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G555.55
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G546.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G542.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.02
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G545.55
whole body, embryo E17.5.CNhs10513.490-9F943.40
whole body, embryo E17.CNhs10517.475-3I532.97
whole body, embryo E18.CNhs10516.493-3B340.00
whole body, neonate N00.CNhs10525.657-19C239.32
whole body, neonate N01.CNhs10576.659-23C634.24
whole body, neonate N06.CNhs10515.692-21D126.47
whole body, neonate N10.CNhs10518.761-6B425.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.53e-1429
immune organ1.53e-1429
mixed endoderm/mesoderm-derived structure8.00e-1335
thymus1.50e-1223
neck1.50e-1223
respiratory system epithelium1.50e-1223
hemolymphoid system gland1.50e-1223
pharyngeal epithelium1.50e-1223
thymic region1.50e-1223
pharyngeal gland1.50e-1223
entire pharyngeal arch endoderm1.50e-1223
thymus primordium1.50e-1223
early pharyngeal endoderm1.50e-1223
gland of gut1.82e-1224
pharynx1.41e-1124
upper respiratory tract1.41e-1124
chordate pharynx1.41e-1124
pharyngeal arch system1.41e-1124
pharyngeal region of foregut1.41e-1124
endo-epithelium4.12e-1069
subdivision of digestive tract5.57e-10114
hematopoietic system1.21e-0945
blood island1.21e-0945
endoderm-derived structure1.30e-09118
endoderm1.30e-09118
presumptive endoderm1.30e-09118
digestive system4.04e-09116
digestive tract4.04e-09116
primitive gut4.04e-09116
foregut4.22e-0980
respiratory system6.83e-0942
hemolymphoid system7.61e-0948
immune system7.61e-0948
respiratory tract7.95e-0941
gut epithelium9.05e-0955
segment of respiratory tract5.29e-0827
craniocervical region5.91e-0736
anterior region of body8.60e-0743
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