FFCP PHASE1:Mm9::chr8:82163298..82163323,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:82163298..82163323,+ to FFCP PHASE1:Mm9::chr8:82163298..82163323,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73945 | |EntrezGene=73945 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B2RRE7 | |UniProt=B2RRE7 | ||
|association_with_transcript=-193bp_to_ENSMUST00000173078_5end | |||
|cluster_id=chr8:82163298..82163323,+ | |||
|description=CAGE_peak_4_at_Otud4_5end | |||
|id=chr8:82163298..82163323,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!1.18e-09!69;UBERON:0001048!1.43e-07!147;UBERON:0000065!1.46e-07!41;UBERON:0001004!4.22e-07!42;UBERON:0004177!5.79e-07!29;UBERON:0003929!5.97e-07!55;UBERON:0005057!6.08e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,8.83e-11,134;UBERON:0005911,9.96e-10,69;UBERON:0000065,1.06e-07,41;UBERON:0004921,1.20e-07,114;UBERON:0004119,1.27e-07,118;UBERON:0000925,1.27e-07,118;UBERON:0006595,1.27e-07,118;UBERON:0001041,1.40e-07,80;UBERON:0001004,3.12e-07,42;UBERON:0004177,3.48e-07,29;UBERON:0005057,3.48e-07,29;UBERON:0001007,3.63e-07,116;UBERON:0001555,3.63e-07,116;UBERON:0007026,3.63e-07,116;UBERON:0003929,5.24e-07,55;UBERON:0000077,5.73e-07,35;UBERON:0002370,8.71e-07,23;UBERON:0000974,8.71e-07,23;UBERON:0004807,8.71e-07,23;UBERON:0005058,8.71e-07,23;UBERON:0003351,8.71e-07,23;UBERON:0009113,8.71e-07,23;UBERON:0003295,8.71e-07,23;UBERON:0009722,8.71e-07,23;UBERON:0005562,8.71e-07,23;UBERON:0007690,8.71e-07,23 | |||
|phase1_expression=1.44133962394315,3.83872948403297,4.54999239389536,1.51232105653415,3.50627010962443,4.02910252588535,3.03696432774183,5.55230290798778,5.91312633037,8.89445200023575,2.39705155515707,3.5099749957948,4.79362043807376,3.67165690159789,2.99798785634096,3.23960427823721,3.49780939064073,5.52058789376916,5.62169177783529,4.2438965179803,1.9559956734746,2.58156473122302,1.30599894569468,1.75991665072747,0.68822784320151,2.29692785646008,2.58457197695445,1.50829862880122,1.33016393619462,2.77233142735924,1.55211357458713,3.17515336729816,1.23012957516914,0,2.59966457776147,0.997407872150954,0.816677425049476,1.67412652294763,0.7813353445238,2.61761871986899,0.588231488031014,2.04913645487534,0.971020706062307,1.25896817975577,1.72340783073175,0.734187008646726,0,0.65407546914134,0.219686182734472,0.388859798148567,0.979904951377538,2.87505128729943,4.36234775750115,4.35217285206807,6.04968838456435,0.514518872071894,0,1.03134418455488,1.01158230429799,1.5869729378161,0.633831403506179,0,0,1.7997994345628,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,1.8664130215526,0.810035629990144,1.89292465216244,0.856952953211411,0.220868540951614,1.83736198822431,1.43768206527355,0,1.10115880999389,0.766124028511126,1.38245879930619,1.05509030184155,0.914876436024097,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,1.17851434189467,1.85083185038834,1.4911955666024,2.12033341332915,1.058001841495,2.89864488701678,4.30211938490693,0.679971333707751,1.07940638327563,1.94932925234301,1.79210754838934,1.96622188184453,1.1930122580464,1.81850203222008,0.70667914902068,1.12674735821344,0,0,7.11066703153331,1.73192832808971,1.77351905832569,1.51657333504435,3.31133251185274,1.55362730188303,1.92974780784272,1.56136794089522,1.52232739156071,0.922461989024234,1.20578112442098,2.11659672844269,1.88499886994513,4.20231445148436,1.59059292611903,0.884610551949874,1.94120219936891,1.98757366614354,2.42437626567611,3.72783522436244,2.04946557908083,2.09446706813455,2.29911349687732,2.03685711660064,0,3.17675567682662,2.09706895166752,1.37250180845588,1.63350657746724,0.695297280769106,1.27857728665165,0.83115217823824,1.1356888414743,1.73126918545538,1.7416975885413,2.27450482590307,2.10441855886474,2.47228841629137,0.689706313300419,2.70093194708024,2.86339153887859,3.06164246180975,2.8185018462667,2.81105173679186,0.776110112217047,1.07783996466421,2.64748512234947,1.93546236580344,0.657587197282725,2.78047249225598,1.39300866608867,0.61734640922383,2.9855140022774,1.40442637462647,0.772043721344145,0.568326998791185,3.31401236056803,1.64168241986767,1.80062061461015,1.89395788468168,2.55793501271625,2.46827380619805,1.39520366850245,1.60964040839772,2.80236821681207,1.81015834904829,2.79084688934462,2.26992666728396,2.92399974850665,3.29325172936576,4.02619256281115,2.3131894342054,1.74937841044784,4.29544417878937,1.85115396664481,1.70630600428187,1.16118335930219,1.80414445850931,1.4117846723634,1.33426826306922,1.71203063501303,2.37264530772256,1.31759163779209,2.01068167040216,1.39269530428806,1.9496408711912,3.59527763461689,3.6743468478698,2.58883655230677,1.13800740571849,2.05647322697512,2.25415471346161,2.44381593414377,1.35766741017338,2.03393877681924,1.83385957660346,1.18088118383682,1.72698600625512,1.23397163921801,2.96452627087149,2.66952169145751,1.96558995113203,2.02375901146368,2.23146133527353,2.894125917029,2.03700681425136,1.15078454980324,2.59416362840057,2.47105271869273,7.18841032636773,2.60498663367952,2.49630138491648,1.76805214562978,1.4351793081753,1.92977408545347,4.0645701836653,3.22135400009824,1.79261474086228,2.71592137240301,1.64283173801951,2.34508760418542,3.57065461329021,4.29294025287157,1.89162172927429,1.99318220683897,4.30527875375215,2.45794972073607,3.28101465545202,3.32692834737477,1.50791283939272,0,0.983528546038072,1.93155722413313,0.642202359951168,0.586058432961016,1.47541450839008,3.53459298086122,1.89304931649754,0.780877488593277,1.93881057959519,2.38968797952552,2.67358408898873,2.83076530788832,2.02405350837447,1.16902343164525,1.58115111178609,1.92792789853084,2.55492153374884,3.02711526234334,2.44330439030364,2.96946221350564,1.32745138339963,0.971122544619926,1.81394134178851,1.32023555829129,0.885905678642318,0.922305443831782,1.80899805217755,1.45413491791002,1.42598951353889,0.316036757935816,2.10837217149998,1.03135543248187,1.02131881726136,1.62054984628179,1.29358683782755,1.07168517515796,1.59606210278046,1.60531935841864,2.30368628842969,1.2178597964584,2.3467170806371,4.02480934641258,1.7642271844397,2.4732937941222,2.9063596805263,1.86970067277283,0.954978752025092,0.984845398470368,1.7488850197791,0.556275906031529,4.10090113914846,2.06386867963222,2.22233432843654,1.50694765603753,2.32380187125743,3.20289442489132,2.37969801991397,2.6590775941495,3.17859939750175,0.954670618015114,1.89801596148681,1.42323626988794,2.05210147561422,2.50905955217362,1.52853794622324,1.61837215661785,1.65306911450672,2.8793153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| |phase1_expression=1.44133962394315,3.83872948403297,4.54999239389536,1.51232105653415,3.50627010962443,4.02910252588535,3.03696432774183,5.55230290798778,5.91312633037,8.89445200023575,2.39705155515707,3.5099749957948,4.79362043807376,3.67165690159789,2.99798785634096,3.23960427823721,3.49780939064073,5.52058789376916,5.62169177783529,4.2438965179803,1.9559956734746,2.58156473122302,1.30599894569468,1.75991665072747,0.68822784320151,2.29692785646008,2.58457197695445,1.50829862880122,1.33016393619462,2.77233142735924,1.55211357458713,3.17515336729816,1.23012957516914,0,2.59966457776147,0.997407872150954,0.816677425049476,1.67412652294763,0.7813353445238,2.61761871986899,0.588231488031014,2.04913645487534,0.971020706062307,1.25896817975577,1.72340783073175,0.734187008646726,0,0.65407546914134,0.219686182734472,0.388859798148567,0.979904951377538,2.87505128729943,4.36234775750115,4.35217285206807,6.04968838456435,0.514518872071894,0,1.03134418455488,1.01158230429799,1.5869729378161,0.633831403506179,0,0,1.7997994345628,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,1.8664130215526,0.810035629990144,1.89292465216244,0.856952953211411,0.220868540951614,1.83736198822431,1.43768206527355,0,1.10115880999389,0.766124028511126,1.38245879930619,1.05509030184155,0.914876436024097,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,1.17851434189467,1.85083185038834,1.4911955666024,2.12033341332915,1.058001841495,2.89864488701678,4.30211938490693,0.679971333707751,1.07940638327563,1.94932925234301,1.79210754838934,1.96622188184453,1.1930122580464,1.81850203222008,0.70667914902068,1.12674735821344,0,0,7.11066703153331,1.73192832808971,1.77351905832569,1.51657333504435,3.31133251185274,1.55362730188303,1.92974780784272,1.56136794089522,1.52232739156071,0.922461989024234,1.20578112442098,2.11659672844269,1.88499886994513,4.20231445148436,1.59059292611903,0.884610551949874,1.94120219936891,1.98757366614354,2.42437626567611,3.72783522436244,2.04946557908083,2.09446706813455,2.29911349687732,2.03685711660064,0,3.17675567682662,2.09706895166752,1.37250180845588,1.63350657746724,0.695297280769106,1.27857728665165,0.83115217823824,1.1356888414743,1.73126918545538,1.7416975885413,2.27450482590307,2.10441855886474,2.47228841629137,0.689706313300419,2.70093194708024,2.86339153887859,3.06164246180975,2.8185018462667,2.81105173679186,0.776110112217047,1.07783996466421,2.64748512234947,1.93546236580344,0.657587197282725,2.78047249225598,1.39300866608867,0.61734640922383,2.9855140022774,1.40442637462647,0.772043721344145,0.568326998791185,3.31401236056803,1.64168241986767,1.80062061461015,1.89395788468168,2.55793501271625,2.46827380619805,1.39520366850245,1.60964040839772,2.80236821681207,1.81015834904829,2.79084688934462,2.26992666728396,2.92399974850665,3.29325172936576,4.02619256281115,2.3131894342054,1.74937841044784,4.29544417878937,1.85115396664481,1.70630600428187,1.16118335930219,1.80414445850931,1.4117846723634,1.33426826306922,1.71203063501303,2.37264530772256,1.31759163779209,2.01068167040216,1.39269530428806,1.9496408711912,3.59527763461689,3.6743468478698,2.58883655230677,1.13800740571849,2.05647322697512,2.25415471346161,2.44381593414377,1.35766741017338,2.03393877681924,1.83385957660346,1.18088118383682,1.72698600625512,1.23397163921801,2.96452627087149,2.66952169145751,1.96558995113203,2.02375901146368,2.23146133527353,2.894125917029,2.03700681425136,1.15078454980324,2.59416362840057,2.47105271869273,7.18841032636773,2.60498663367952,2.49630138491648,1.76805214562978,1.4351793081753,1.92977408545347,4.0645701836653,3.22135400009824,1.79261474086228,2.71592137240301,1.64283173801951,2.34508760418542,3.57065461329021,4.29294025287157,1.89162172927429,1.99318220683897,4.30527875375215,2.45794972073607,3.28101465545202,3.32692834737477,1.50791283939272,0,0.983528546038072,1.93155722413313,0.642202359951168,0.586058432961016,1.47541450839008,3.53459298086122,1.89304931649754,0.780877488593277,1.93881057959519,2.38968797952552,2.67358408898873,2.83076530788832,2.02405350837447,1.16902343164525,1.58115111178609,1.92792789853084,2.55492153374884,3.02711526234334,2.44330439030364,2.96946221350564,1.32745138339963,0.971122544619926,1.81394134178851,1.32023555829129,0.885905678642318,0.922305443831782,1.80899805217755,1.45413491791002,1.42598951353889,0.316036757935816,2.10837217149998,1.03135543248187,1.02131881726136,1.62054984628179,1.29358683782755,1.07168517515796,1.59606210278046,1.60531935841864,2.30368628842969,1.2178597964584,2.3467170806371,4.02480934641258,1.7642271844397,2.4732937941222,2.9063596805263,1.86970067277283,0.954978752025092,0.984845398470368,1.7488850197791,0.556275906031529,4.10090113914846,2.06386867963222,2.22233432843654,1.50694765603753,2.32380187125743,3.20289442489132,2.37969801991397,2.6590775941495,3.17859939750175,0.954670618015114,1.89801596148681,1.42323626988794,2.05210147561422,2.50905955217362,1.52853794622324,1.61837215661785,1.65306911450672,2.8793153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| ||
|short_description=p4@Otud4 | |||
}} | }} |
Latest revision as of 19:44, 25 September 2015
Short description: | p4@Otud4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Otud4_5end |
Coexpression cluster: | NA |
Association with transcript: | -193bp_to_ENSMUST00000173078_5end |
EntrezGene: | Otud4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 8.83e-11 | 134 |
endo-epithelium | 9.96e-10 | 69 |
respiratory tract | 1.06e-07 | 41 |
subdivision of digestive tract | 1.20e-07 | 114 |
endoderm-derived structure | 1.27e-07 | 118 |
endoderm | 1.27e-07 | 118 |
presumptive endoderm | 1.27e-07 | 118 |
foregut | 1.40e-07 | 80 |
respiratory system | 3.12e-07 | 42 |
hemopoietic organ | 3.48e-07 | 29 |
immune organ | 3.48e-07 | 29 |
digestive system | 3.63e-07 | 116 |
digestive tract | 3.63e-07 | 116 |
primitive gut | 3.63e-07 | 116 |
gut epithelium | 5.24e-07 | 55 |
mixed endoderm/mesoderm-derived structure | 5.73e-07 | 35 |
thymus | 8.71e-07 | 23 |
neck | 8.71e-07 | 23 |
respiratory system epithelium | 8.71e-07 | 23 |
hemolymphoid system gland | 8.71e-07 | 23 |
pharyngeal epithelium | 8.71e-07 | 23 |
thymic region | 8.71e-07 | 23 |
pharyngeal gland | 8.71e-07 | 23 |
entire pharyngeal arch endoderm | 8.71e-07 | 23 |
thymus primordium | 8.71e-07 | 23 |
early pharyngeal endoderm | 8.71e-07 | 23 |