FFCP PHASE1:Mm9::chr2:135877916..135877935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76161 | |EntrezGene=76161 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=A2AT95 | |UniProt=A2AT95 | ||
|association_with_transcript=-39bp_to_ENSMUST00000144403_5end | |association_with_transcript=-39bp_to_ENSMUST00000144403_5end | ||
|cluster_id=chr2:135877916..135877935,+ | |||
|description=CAGE_peak_7_at_6330527O06Rik_5end | |description=CAGE_peak_7_at_6330527O06Rik_5end | ||
|id=chr2:135877916..135877935,+ | |id=chr2:135877916..135877935,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,4.28e-18,3;CL:0000117,8.93e-15,23;CL:0000337,8.93e-15,23;CL:0002611,2.61e-12,2;CL:0000540,4.91e-10,33;CL:0000047,4.91e-10,33;CL:0000031,4.91e-10,33;CL:0000404,4.91e-10,33;CL:0000393,2.37e-08,39;CL:0000211,2.37e-08,39;CL:0000120,5.45e-08,3;CL:0002319,1.73e-07,43;CL:0000221,2.68e-07,44;CL:0000133,2.68e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.87e-10!12;UBERON:0003057!2.87e-10!12;UBERON:0002240!2.82e-09!6;UBERON:0005174!2.82e-09!6;UBERON:0001137!2.82e-09!6;UBERON:0001948!4.75e-08!5;UBERON:0002315!4.75e-08!5;UBERON:0000489!2.45e-07!21 | |ontology_enrichment_uberon=UBERON:0003076!2.87e-10!12;UBERON:0003057!2.87e-10!12;UBERON:0002240!2.82e-09!6;UBERON:0005174!2.82e-09!6;UBERON:0001137!2.82e-09!6;UBERON:0001948!4.75e-08!5;UBERON:0002315!4.75e-08!5;UBERON:0000489!2.45e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,7.09e-34,6;UBERON:0005174,7.09e-34,6;UBERON:0001137,7.09e-34,6;UBERON:0003076,1.24e-29,12;UBERON:0003057,1.24e-29,12;UBERON:0001948,9.94e-29,5;UBERON:0002315,9.94e-29,5;UBERON:0002257,4.28e-18,3;UBERON:0000489,1.31e-12,21;UBERON:0001896,1.77e-12,2;UBERON:0002298,1.77e-12,2;UBERON:0005290,1.77e-12,2;UBERON:0010096,1.77e-12,2;UBERON:0002256,2.61e-12,2;UBERON:0002346,3.95e-11,64;UBERON:0003075,3.95e-11,64;UBERON:0007284,3.95e-11,64;UBERON:0004121,9.22e-10,95;UBERON:0000924,9.22e-10,95;UBERON:0006601,9.22e-10,95;UBERON:0001049,1.33e-09,52;UBERON:0005068,1.33e-09,52;UBERON:0006241,1.33e-09,52;UBERON:0007135,1.33e-09,52;UBERON:0010371,1.49e-09,73;UBERON:0001017,1.86e-09,73;UBERON:0001016,3.69e-09,75;UBERON:0002020,1.64e-07,34;UBERON:0000073,2.03e-07,54;UBERON:0010314,3.14e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,3.71346279724945,4.41737081903227,0,0,0,0,0,0.153606533256243,0,0,0,1.95428099300967,0,0,5.30331453852602,3.84403538157578,13.6071595452469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,0,0.124406970610093,0.252722758433675,1.05220927943237,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,6.46758426847539,0,0,0.175951124163949,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.814605311381257,1.55161989734101,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13761887960934,4.21962071731931,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0,1.03552062350364,0.31136204275253,0.399024873401031,1.19513524027894,0.729320151204882,0.209613162627982,0.919217542250071,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.943131706930381,0.280924522409647,0.448176066834085,0.402048282689293,0.952587382566147,0.463537303779422,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0.789209134313529,0.679020569229309,0,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0.765153328275374,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,3.71346279724945,4.41737081903227,0,0,0,0,0,0.153606533256243,0,0,0,1.95428099300967,0,0,5.30331453852602,3.84403538157578,13.6071595452469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,0,0.124406970610093,0.252722758433675,1.05220927943237,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,6.46758426847539,0,0,0.175951124163949,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.814605311381257,1.55161989734101,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13761887960934,4.21962071731931,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0,1.03552062350364,0.31136204275253,0.399024873401031,1.19513524027894,0.729320151204882,0.209613162627982,0.919217542250071,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.943131706930381,0.280924522409647,0.448176066834085,0.402048282689293,0.952587382566147,0.463537303779422,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0.789209134313529,0.679020569229309,0,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0.765153328275374,0,0.231867835620421 | ||
|short_description=p7@6330527O06Rik | |short_description=p7@6330527O06Rik | ||
}} | }} |
Latest revision as of 19:24, 25 September 2015
Short description: | p7@6330527O06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_6330527O06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -39bp_to_ENSMUST00000144403_5end |
EntrezGene: | 6330527O06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 4.28e-18 | 3 |
CNS neuron (sensu Vertebrata) | 8.93e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.93e-15 | 23 |
neuron of the dorsal spinal cord | 2.61e-12 | 2 |
neuron | 4.91e-10 | 33 |
neuronal stem cell | 4.91e-10 | 33 |
neuroblast | 4.91e-10 | 33 |
electrically signaling cell | 4.91e-10 | 33 |
electrically responsive cell | 2.37e-08 | 39 |
electrically active cell | 2.37e-08 | 39 |
granule cell | 5.45e-08 | 3 |
neural cell | 1.73e-07 | 43 |
ectodermal cell | 2.68e-07 | 44 |
neurectodermal cell | 2.68e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 7.09e-34 | 6 |
dorsal region element | 7.09e-34 | 6 |
dorsum | 7.09e-34 | 6 |
posterior neural tube | 1.24e-29 | 12 |
chordal neural plate | 1.24e-29 | 12 |
regional part of spinal cord | 9.94e-29 | 5 |
gray matter of spinal cord | 9.94e-29 | 5 |
ventral horn of spinal cord | 4.28e-18 | 3 |
cavitated compound organ | 1.31e-12 | 21 |
medulla oblongata | 1.77e-12 | 2 |
brainstem | 1.77e-12 | 2 |
myelencephalon | 1.77e-12 | 2 |
future myelencephalon | 1.77e-12 | 2 |
dorsal horn of spinal cord | 2.61e-12 | 2 |
neurectoderm | 3.95e-11 | 64 |
neural plate | 3.95e-11 | 64 |
presumptive neural plate | 3.95e-11 | 64 |
ectoderm-derived structure | 9.22e-10 | 95 |
ectoderm | 9.22e-10 | 95 |
presumptive ectoderm | 9.22e-10 | 95 |
neural tube | 1.33e-09 | 52 |
neural rod | 1.33e-09 | 52 |
future spinal cord | 1.33e-09 | 52 |
neural keel | 1.33e-09 | 52 |
ecto-epithelium | 1.49e-09 | 73 |
central nervous system | 1.86e-09 | 73 |
nervous system | 3.69e-09 | 75 |
gray matter | 1.64e-07 | 34 |
regional part of nervous system | 2.03e-07 | 54 |
structure with developmental contribution from neural crest | 3.14e-07 | 92 |