FFCP PHASE1:Mm9::chr16:8637805..8637869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54128 | |EntrezGene=54128 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000130885,ENSMUST00000143174_5end | |association_with_transcript=0bp_to_ENSMUST00000130885,ENSMUST00000143174_5end | ||
|cluster_id=chr16:8637805..8637869,+ | |||
|description=CAGE_peak_1_at_Pmm2_5end | |description=CAGE_peak_1_at_Pmm2_5end | ||
|id=chr16:8637805..8637869,+ | |id=chr16:8637805..8637869,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.63e-23!130;UBERON:0000925!5.63e-23!130;UBERON:0006595!5.63e-23!130;UBERON:0001007!1.25e-22!128;UBERON:0001555!1.25e-22!128;UBERON:0007026!1.25e-22!128;UBERON:0004921!2.33e-21!126;UBERON:0004185!2.33e-21!126;UBERON:0005409!2.66e-16!59;UBERON:0000160!1.22e-13!43;UBERON:0000344!5.32e-10!15;UBERON:0004923!1.39e-09!24;UBERON:0001242!8.31e-09!13;UBERON:0000060!8.31e-09!13;UBERON:0001262!8.31e-09!13;UBERON:0004786!8.31e-09!13;UBERON:0003929!1.67e-08!55;UBERON:0000077!4.41e-08!97;UBERON:0005911!6.60e-08!69;UBERON:0001041!2.70e-07!92 | |ontology_enrichment_uberon=UBERON:0004119!5.63e-23!130;UBERON:0000925!5.63e-23!130;UBERON:0006595!5.63e-23!130;UBERON:0001007!1.25e-22!128;UBERON:0001555!1.25e-22!128;UBERON:0007026!1.25e-22!128;UBERON:0004921!2.33e-21!126;UBERON:0004185!2.33e-21!126;UBERON:0005409!2.66e-16!59;UBERON:0000160!1.22e-13!43;UBERON:0000344!5.32e-10!15;UBERON:0004923!1.39e-09!24;UBERON:0001242!8.31e-09!13;UBERON:0000060!8.31e-09!13;UBERON:0001262!8.31e-09!13;UBERON:0004786!8.31e-09!13;UBERON:0003929!1.67e-08!55;UBERON:0000077!4.41e-08!97;UBERON:0005911!6.60e-08!69;UBERON:0001041!2.70e-07!92 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.08e-22,118;UBERON:0000925,1.08e-22,118;UBERON:0006595,1.08e-22,118;UBERON:0001007,2.24e-22,116;UBERON:0001555,2.24e-22,116;UBERON:0007026,2.24e-22,116;UBERON:0004921,4.12e-21,114;UBERON:0005409,1.28e-17,47;UBERON:0000160,1.08e-15,31;UBERON:0000344,5.32e-10,15;UBERON:0004923,1.39e-09,24;UBERON:0001242,8.31e-09,13;UBERON:0001262,8.31e-09,13;UBERON:0004786,8.31e-09,13;UBERON:0003929,1.67e-08,55;UBERON:0005911,6.60e-08,69;UBERON:0001041,4.72e-07,80 | |||
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|phase1_expression=18.5772662641561,136.100408979351,106.014822777762,78.338230728469,86.6549612807181,96.8663398931604,99.2853722530984,34.0885573885761,22.9485617107217,20.3636137900134,41.6059662787977,38.9288135897242,47.422602190944,46.6824948917446,23.6507930889121,32.3960427823721,31.4802845157666,33.2812584452941,38.5291558432126,33.5267824920444,29.4249783922701,27.702175385047,24.5527801790599,101.275203628226,100.940083669555,103.361753540704,110.705833012882,143.503840968802,168.170726218891,127.275215528765,151.885399798884,21.5910428976275,18.4519436275371,0,49.1047753577167,59.1795337476233,46.7547825840825,32.2269355667419,46.880120671428,42.4054232618777,25.8821854733646,19.1252735788365,26.7030694167134,16.7442767907518,19.9712554502444,17.0698479510364,8.60630478782843,7.84890562969608,16.9158360705543,8.94377535741704,9.09911740564856,4.31257693094915,28.019695211642,23.211588544363,31.2567233202492,20.8380143189117,13.7536051170603,19.5955395065428,13.1505699558739,14.2827564403449,11.4089652631112,10.165335962074,13.3394219416671,19.7977937801908,15.8218618010716,12.0781619540837,9.28760342607055,9.22123932771731,16.4866483570479,13.6355997715008,14.7227472945967,11.4260393761521,13.4729809980484,14.3314235081496,17.827257609392,12.8690630125403,12.1127469099328,8.42736431362239,9.36999852863085,18.0684214190366,16.1933129176265,13.5437476344758,11.1673199600552,12.9435400307286,11.3070703354839,10.606629077052,13.0981946335175,11.5567656411686,46.7230612865746,27.2057616384428,29.5661778475711,47.3233132339763,22.4390540123558,37.7792234146472,42.2354671340985,38.9783391774682,34.1279940920157,39.0285438703752,28.8362465109184,28.9738451098479,16.9012103732017,25.6652954828636,7.64415719119937,14.2213340630666,20.3501578550541,26.8561457403604,26.7927955857835,57.206123739249,56.9663344023778,22.4147629987885,18.7364152907427,16.7456013071678,15.912469310668,19.2924979907357,29.1619993696548,26.2643175879022,34.360100515078,42.6568102913739,17.6922110389975,23.6179600923217,21.6424688091186,26.6681389224372,70.8288692628864,17.8596286177044,27.2280718857492,99.372794476142,27.5574786363617,22.1964010467561,28.8449415455857,12.1330417917906,10.980014467647,17.9685723521396,14.4274185759589,19.4343747571051,11.0127663616567,16.3863675698435,20.5715514977639,27.3695335342205,31.3376220457757,36.6168829242465,17.1758984710769,14.4838325793088,13.5046597354012,17.6324636867787,24.493139694478,25.8789714975397,21.1765897504987,25.8703370739016,17.4610074275602,19.0997140969497,20.2343792788541,18.1932457914887,18.9072129473407,30.2979384874285,20.7839957772023,14.3304672109315,22.4708219940235,22.6466158260949,31.2579849335152,18.2270679831242,19.7001890384121,19.6267646992506,17.7558551688908,20.6602443334774,18.6663206593728,22.5557926407896,18.7791380979733,30.4757543578312,24.1902979372816,29.8784784623953,28.2119457219578,25.8773977742838,33.1520674089486,27.5123158458762,13.6688466566683,16.8763564302026,124.898299967876,94.4088522988853,18.9826542976358,19.9723537799977,30.9281907173024,47.5973118111088,61.1539620573393,70.1932560355343,97.2784576166249,91.078521962378,90.7320103768973,83.163805313201,75.8410298893377,124.037078394283,131.411934323814,140.792880190838,17.6391147886366,18.965253093215,15.7790829942313,18.3286195060783,21.3347735884388,30.2986741926176,32.3771070076197,35.7216558110637,33.911725213737,35.7851775373221,45.6537045714209,20.1882577916474,20.4421354917731,27.2083155985673,21.9088931099583,21.2235900582127,25.9718368817048,21.5772103088108,46.3706748576601,50.519300026607,63.258010872036,59.914692574629,65.8399490271723,59.6086151955184,51.3076602672669,59.3405531276942,19.9533445379933,14.5908387063273,21.8373068432315,19.5206848641466,22.5302638356962,24.6234198439469,21.4239276797412,27.5138443479496,30.5812179566011,26.575762757853,32.3693180374699,30.4785765371273,31.6013516814589,35.1497212353073,49.7611236999598,28.8270012423916,44.7505488447323,39.183017975272,13.0045977890111,15.8235776899474,12.131185957874,27.5193310652767,15.7754109708128,16.7888660047555,16.5876016254255,13.3822526853429,15.1503098376028,20.9476632783736,16.1924280669958,15.4895604692995,13.8350722281283,15.4234231882467,21.8587731220734,15.4917075190512,22.3155134314399,24.5805483229078,25.2215762845929,17.9657670754686,19.6510312027088,23.3870298897314,20.3758306087733,18.4461088766356,42.6406683727565,33.081569382453,29.2327850275471,35.7121536467472,37.9506990869996,30.9406629744561,19.7454971337197,19.6266592494128,18.4982917809339,16.5039516974326,15.6059405605201,15.161349496176,15.3030589159972,23.1393361327095,31.4460088805372,26.9026729997052,127.465414075768,27.5360042412272,34.3919228862279,34.2577413591925,32.7080222568594,32.6640390492672,101.435331147188,15.5757253688828,26.1432447620715,18.3684312487268,26.4828174138688,39.3690075139804,36.3606645737927,38.4347330986958,23.9669586291336,24.6314556089638,23.7703954943609,80.1923319132695,18.5056556244964,28.05808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| ||
|short_description=p1@Pmm2 | |short_description=p1@Pmm2 | ||
}} | }} |
Latest revision as of 19:19, 25 September 2015
Short description: | p1@Pmm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pmm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000130885, ENSMUST00000143174_5end |
EntrezGene: | Pmm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.08e-22 | 118 |
endoderm | 1.08e-22 | 118 |
presumptive endoderm | 1.08e-22 | 118 |
digestive system | 2.24e-22 | 116 |
digestive tract | 2.24e-22 | 116 |
primitive gut | 2.24e-22 | 116 |
subdivision of digestive tract | 4.12e-21 | 114 |
gastrointestinal system | 1.28e-17 | 47 |
intestine | 1.08e-15 | 31 |
mucosa | 5.32e-10 | 15 |
organ component layer | 1.39e-09 | 24 |
intestinal mucosa | 8.31e-09 | 13 |
wall of intestine | 8.31e-09 | 13 |
gastrointestinal system mucosa | 8.31e-09 | 13 |
gut epithelium | 1.67e-08 | 55 |
endo-epithelium | 6.60e-08 | 69 |
foregut | 4.72e-07 | 80 |