FFCP PHASE1:Mm9::chr10:128181321..128181338,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:128181321..128181338,-
|short_description=p7@Dgka
|description=CAGE_peak_7_at_Dgka_5end
|association_with_transcript=-209bp_to_ENSMUST00000026414,NM_01681...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13139 | |EntrezGene=13139 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=O88673 | |UniProt=O88673 | ||
|association_with_transcript=-209bp_to_ENSMUST00000026414,NM_016811,uc007hoc.1_5end | |||
|cluster_id=chr10:128181321..128181338,- | |||
|description=CAGE_peak_7_at_Dgka_5end | |||
|id=chr10:128181321..128181338,- | |||
|ontology_enrichment_celltype=CL:0000239!6.56e-08!6;CL:0000677!6.56e-08!6;CL:0000212!6.56e-08!6;CL:0000584!6.56e-08!6;CL:0002563!1.39e-07!9;CL:0002251!1.39e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.04e-15,6;CL:0000677,5.04e-15,6;CL:0000584,5.04e-15,6;CL:0000075,7.65e-13,7;CL:0000682,3.54e-11,3;CL:0000066,5.11e-10,25;CL:0002563,6.28e-10,9;CL:0002251,6.28e-10,9;CL:0002076,5.66e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.39e-14!15;UBERON:0000160!3.25e-12!43;UBERON:0001242!6.12e-12!13;UBERON:0000060!6.12e-12!13;UBERON:0001262!6.12e-12!13;UBERON:0004786!6.12e-12!13;UBERON:0005409!1.90e-11!59;UBERON:0003350!1.39e-07!9;UBERON:0004808!1.39e-07!9;UBERON:0001277!1.39e-07!9;UBERON:0007023!4.44e-07!51;UBERON:0004923!6.12e-07!24;UBERON:0001007!9.13e-07!128;UBERON:0001555!9.13e-07!128;UBERON:0007026!9.13e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.62e-30,31;UBERON:0000344,4.91e-27,15;UBERON:0001242,2.01e-21,13;UBERON:0001262,2.01e-21,13;UBERON:0004786,2.01e-21,13;UBERON:0005409,3.67e-21,47;UBERON:0004923,3.85e-16,24;UBERON:0002108,2.49e-14,4;UBERON:0000331,1.72e-11,3;UBERON:0002116,1.72e-11,3;UBERON:0001204,1.72e-11,3;UBERON:0001168,1.72e-11,3;UBERON:0003350,6.28e-10,9;UBERON:0004808,6.28e-10,9;UBERON:0001277,6.28e-10,9;UBERON:0001007,1.76e-09,116;UBERON:0001555,1.76e-09,116;UBERON:0007026,1.76e-09,116;UBERON:0004119,2.98e-09,118;UBERON:0000925,2.98e-09,118;UBERON:0006595,2.98e-09,118;UBERON:0001155,2.89e-08,2;UBERON:0000059,2.89e-08,2;UBERON:0000485,4.54e-08,11;UBERON:0004921,1.43e-07,114;UBERON:0001962,1.66e-07,2;UBERON:0001961,1.66e-07,2;UBERON:0001744,1.66e-07,2 | |||
|phase1_expression=0,14.3079917132138,18.1999695755814,8.77146212789807,8.5152274090879,0.671517087647559,1.16806320297763,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0,0,4.63978026100879,3.21172993494038,8.03924749761028,7.32295393470427,6.24866574789078,10.0712412311878,12.6015064879965,4.21287970245079,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,1.02765491747154,0,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,7.45567044872489,0,0.209446706813455,9.96282515313506,0,0,0,0.149790639404823,0.457500602818626,0,0.347648640384553,0,0,0,0,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,0,0,28.7464341195904,5.81791246659797,0,0,0,0,0,0,6.64340686162316,0.164698954724011,0.502670417600539,0.596869416123452,0.38992817423824,8.98819408654222,6.05186539649144,6.37252074413975,0,0,0,0,0,0,0,0,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0.144649058581512,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0.425820255624806,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,3.36998930558661,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,0.579568782096571,0,0.549454872801795,0.428736758158132,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,14.3079917132138,18.1999695755814,8.77146212789807,8.5152274090879,0.671517087647559,1.16806320297763,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0,0,4.63978026100879,3.21172993494038,8.03924749761028,7.32295393470427,6.24866574789078,10.0712412311878,12.6015064879965,4.21287970245079,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,1.02765491747154,0,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,7.45567044872489,0,0.209446706813455,9.96282515313506,0,0,0,0.149790639404823,0.457500602818626,0,0.347648640384553,0,0,0,0,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,0,0,28.7464341195904,5.81791246659797,0,0,0,0,0,0,6.64340686162316,0.164698954724011,0.502670417600539,0.596869416123452,0.38992817423824,8.98819408654222,6.05186539649144,6.37252074413975,0,0,0,0,0,0,0,0,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0.144649058581512,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0.425820255624806,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,3.36998930558661,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,0.579568782096571,0,0.549454872801795,0.428736758158132,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Dgka | |||
}} | }} |
Latest revision as of 19:17, 25 September 2015
Short description: | p7@Dgka |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Dgka_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -209bp_to_ENSMUST00000026414, NM_016811, uc007hoc.1_5end |
EntrezGene: | Dgka |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.04e-15 | 6 |
gut absorptive cell | 5.04e-15 | 6 |
enterocyte | 5.04e-15 | 6 |
columnar/cuboidal epithelial cell | 7.65e-13 | 7 |
M cell of gut | 3.54e-11 | 3 |
epithelial cell | 5.11e-10 | 25 |
intestinal epithelial cell | 6.28e-10 | 9 |
epithelial cell of alimentary canal | 6.28e-10 | 9 |
endo-epithelial cell | 5.66e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.62e-30 | 31 |
mucosa | 4.91e-27 | 15 |
intestinal mucosa | 2.01e-21 | 13 |
wall of intestine | 2.01e-21 | 13 |
gastrointestinal system mucosa | 2.01e-21 | 13 |
gastrointestinal system | 3.67e-21 | 47 |
organ component layer | 3.85e-16 | 24 |
small intestine | 2.49e-14 | 4 |
ileal mucosa | 1.72e-11 | 3 |
ileum | 1.72e-11 | 3 |
mucosa of small intestine | 1.72e-11 | 3 |
wall of small intestine | 1.72e-11 | 3 |
epithelium of mucosa | 6.28e-10 | 9 |
gastrointestinal system epithelium | 6.28e-10 | 9 |
intestinal epithelium | 6.28e-10 | 9 |
digestive system | 1.76e-09 | 116 |
digestive tract | 1.76e-09 | 116 |
primitive gut | 1.76e-09 | 116 |
endoderm-derived structure | 2.98e-09 | 118 |
endoderm | 2.98e-09 | 118 |
presumptive endoderm | 2.98e-09 | 118 |
colon | 2.89e-08 | 2 |
large intestine | 2.89e-08 | 2 |
simple columnar epithelium | 4.54e-08 | 11 |
subdivision of digestive tract | 1.43e-07 | 114 |
gut-associated lymphoid tissue | 1.66e-07 | 2 |
mucosa-associated lymphoid tissue | 1.66e-07 | 2 |
lymphoid tissue | 1.66e-07 | 2 |