FFCP PHASE1:Mm9::chr19:4190985..4191029,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108995 | |EntrezGene=108995 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=202 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C9V1 | |UniProt=Q8C9V1 | ||
|association_with_transcript=17bp_to_ENSMUST00000045864,NM_178650,uc008fzf.1,uc012bgh.1_5end | |association_with_transcript=17bp_to_ENSMUST00000045864,NM_178650,uc008fzf.1,uc012bgh.1_5end | ||
|cluster_id=chr19:4190985..4191029,- | |||
|description=CAGE_peak_2_at_Tbc1d10c_5end | |description=CAGE_peak_2_at_Tbc1d10c_5end | ||
|id=chr19:4190985..4191029,- | |id=chr19:4190985..4191029,- | ||
|ontology_enrichment_celltype=CL:0000838!4.50e-09!12;CL:0000988!1.02e-08!32;CL:0002032!1.02e-08!32;CL:0000037!1.02e-08!32;CL:0000566!1.02e-08!32;CL:0000837!1.02e-08!32;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000542!4.88e-08!13;CL:0000051!4.88e-08!13;CL:0002031!7.03e-08!25;CL:0000791!7.65e-07!9;CL:0000789!7.65e-07!9;CL:0002420!7.65e-07!9;CL:0002419!7.65e-07!9;CL:0000790!7.65e-07!9 | |ontology_enrichment_celltype=CL:0000838!4.50e-09!12;CL:0000988!1.02e-08!32;CL:0002032!1.02e-08!32;CL:0000037!1.02e-08!32;CL:0000566!1.02e-08!32;CL:0000837!1.02e-08!32;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000542!4.88e-08!13;CL:0000051!4.88e-08!13;CL:0002031!7.03e-08!25;CL:0000791!7.65e-07!9;CL:0000789!7.65e-07!9;CL:0002420!7.65e-07!9;CL:0002419!7.65e-07!9;CL:0000790!7.65e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.08e-10,25;CL:0000838,7.63e-09,12;CL:0000988,4.17e-08,32;CL:0002032,4.17e-08,32;CL:0000037,4.17e-08,32;CL:0000837,4.17e-08,32;CL:0000542,4.91e-08,13;CL:0000051,4.91e-08,13;CL:0000553,5.33e-08,6;CL:0000556,5.33e-08,6;CL:0000084,2.27e-07,11;CL:0000827,2.27e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.39e-17!48;UBERON:0004177!8.16e-16!29;UBERON:0002390!4.23e-15!45;UBERON:0003061!4.23e-15!45;UBERON:0002405!4.96e-14!70;UBERON:0002370!6.75e-12!23;UBERON:0000974!6.75e-12!23;UBERON:0004807!6.75e-12!23;UBERON:0005058!6.75e-12!23;UBERON:0003351!6.75e-12!23;UBERON:0009113!6.75e-12!23;UBERON:0003295!6.75e-12!23;UBERON:0009722!6.75e-12!23;UBERON:0005562!6.75e-12!23;UBERON:0007690!6.75e-12!23;UBERON:0005057!3.23e-11!51;UBERON:0006562!4.56e-11!24;UBERON:0003408!4.56e-11!24;UBERON:0001557!4.56e-11!24;UBERON:0001042!4.56e-11!24;UBERON:0008814!4.56e-11!24;UBERON:0009145!4.56e-11!24;UBERON:0000065!2.19e-09!41;UBERON:0000072!5.57e-09!27;UBERON:0001004!6.29e-09!42;UBERON:0003081!1.52e-08!88;UBERON:0001041!5.45e-08!92;UBERON:0000077!9.34e-08!97;UBERON:0001007!2.72e-07!128;UBERON:0001555!2.72e-07!128;UBERON:0007026!2.72e-07!128;UBERON:0003104!4.15e-07!131;UBERON:0009142!4.15e-07!131;UBERON:0004119!6.53e-07!130;UBERON:0000925!6.53e-07!130;UBERON:0006595!6.53e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.22e-21,48;UBERON:0002405,2.22e-21,48;UBERON:0004177,2.16e-18,29;UBERON:0005057,2.16e-18,29;UBERON:0002390,7.38e-18,45;UBERON:0003061,7.38e-18,45;UBERON:0002370,1.13e-14,23;UBERON:0000974,1.13e-14,23;UBERON:0004807,1.13e-14,23;UBERON:0005058,1.13e-14,23;UBERON:0003351,1.13e-14,23;UBERON:0009113,1.13e-14,23;UBERON:0003295,1.13e-14,23;UBERON:0009722,1.13e-14,23;UBERON:0005562,1.13e-14,23;UBERON:0007690,1.13e-14,23;UBERON:0000077,2.55e-14,35;UBERON:0006562,6.82e-14,24;UBERON:0003408,6.82e-14,24;UBERON:0001557,6.82e-14,24;UBERON:0001042,6.82e-14,24;UBERON:0008814,6.82e-14,24;UBERON:0009145,6.82e-14,24;UBERON:0000072,6.72e-12,27;UBERON:0000065,8.79e-11,41;UBERON:0001004,2.08e-10,42;UBERON:0003081,4.01e-09,87;UBERON:0007811,5.91e-08,36 | |||
|phase1_expression=0,0,0,0,0,0,0,16.6569087239633,0.563154888606667,0.70219357896598,0.171217968225505,0.957265907944037,15.2368649638773,13.7250031797826,5.3297561890506,3.44207954562704,0.699561878128147,27.6029394688458,28.5198021899937,28.00971701867,0.340173160604279,3.67376519443276,2.35079810225042,2.3998863419011,2.06468352960453,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,3.34825304589526,5.4693474116666,3.14114246384279,8.82347232046521,6.14740936462601,8.25367600152961,0,0,0,0,0,0,0,0,0,22.1473039996212,7.25362142011344,6.72187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.02765491747154,15.5362730188303,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0.161766849947409,2.20841518460394,1.93950101254089,0,0,0,0.766371165625774,1.07833612055328,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.486412857275134,0.730999937126662,0.219550115291051,0.536825675041487,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0.964708639009667,0.763877555344259,1.15078454980324,0.486405680325106,0.823684239564244,0,0.744281895337007,0.624075346229121,0,0,0,2.03228509183265,0,0,0,0,0,0,0.390267295715598,0.788175720530955,0.44292937929755,0.637819074629948,2.29408640602033,1.72684981865896,1.3018415272336,0,0,0.983528546038072,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,6.66396435111626,0.412773735926445,0.925972636848558,2.63715839806567,8.06495943554049,9.60868327467395,1.86976272993241,2.23922323717853,1.52019971184866,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,7.2682557744481,0.608175645870493,2.46506297195585,4.41730798124503,5.90788095702689,5.36439657909415,6.73094517311826,7.97523446742717,6.15895344683701,6.78240579229499,7.4611377001262,8.08900410139945,12.3151157299622,10.2851673919781,0,0,0,0,0.579568782096571,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0,0,0.824171801606613,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,16.6569087239633,0.563154888606667,0.70219357896598,0.171217968225505,0.957265907944037,15.2368649638773,13.7250031797826,5.3297561890506,3.44207954562704,0.699561878128147,27.6029394688458,28.5198021899937,28.00971701867,0.340173160604279,3.67376519443276,2.35079810225042,2.3998863419011,2.06468352960453,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,3.34825304589526,5.4693474116666,3.14114246384279,8.82347232046521,6.14740936462601,8.25367600152961,0,0,0,0,0,0,0,0,0,22.1473039996212,7.25362142011344,6.72187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.02765491747154,15.5362730188303,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0.161766849947409,2.20841518460394,1.93950101254089,0,0,0,0.766371165625774,1.07833612055328,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.486412857275134,0.730999937126662,0.219550115291051,0.536825675041487,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0.964708639009667,0.763877555344259,1.15078454980324,0.486405680325106,0.823684239564244,0,0.744281895337007,0.624075346229121,0,0,0,2.03228509183265,0,0,0,0,0,0,0.390267295715598,0.788175720530955,0.44292937929755,0.637819074629948,2.29408640602033,1.72684981865896,1.3018415272336,0,0,0.983528546038072,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,6.66396435111626,0.412773735926445,0.925972636848558,2.63715839806567,8.06495943554049,9.60868327467395,1.86976272993241,2.23922323717853,1.52019971184866,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,7.2682557744481,0.608175645870493,2.46506297195585,4.41730798124503,5.90788095702689,5.36439657909415,6.73094517311826,7.97523446742717,6.15895344683701,6.78240579229499,7.4611377001262,8.08900410139945,12.3151157299622,10.2851673919781,0,0,0,0,0.579568782096571,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0,0,0.824171801606613,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p2@Tbc1d10c | |short_description=p2@Tbc1d10c | ||
}} | }} |
Latest revision as of 18:46, 25 September 2015
Short description: | p2@Tbc1d10c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tbc1d10c_5end |
Coexpression cluster: | MCL_coexpression_mm9:202 |
Association with transcript: | 17bp_to_ENSMUST00000045864, NM_178650, uc008fzf.1, uc012bgh.1_5end |
EntrezGene: | Tbc1d10c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 6.08e-10 | 25 |
lymphoid lineage restricted progenitor cell | 7.63e-09 | 12 |
hematopoietic cell | 4.17e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.17e-08 | 32 |
hematopoietic stem cell | 4.17e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.17e-08 | 32 |
lymphocyte | 4.91e-08 | 13 |
common lymphoid progenitor | 4.91e-08 | 13 |
megakaryocyte progenitor cell | 5.33e-08 | 6 |
megakaryocyte | 5.33e-08 | 6 |
T cell | 2.27e-07 | 11 |
pro-T cell | 2.27e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.22e-21 | 48 |
immune system | 2.22e-21 | 48 |
hemopoietic organ | 2.16e-18 | 29 |
immune organ | 2.16e-18 | 29 |
hematopoietic system | 7.38e-18 | 45 |
blood island | 7.38e-18 | 45 |
thymus | 1.13e-14 | 23 |
neck | 1.13e-14 | 23 |
respiratory system epithelium | 1.13e-14 | 23 |
hemolymphoid system gland | 1.13e-14 | 23 |
pharyngeal epithelium | 1.13e-14 | 23 |
thymic region | 1.13e-14 | 23 |
pharyngeal gland | 1.13e-14 | 23 |
entire pharyngeal arch endoderm | 1.13e-14 | 23 |
thymus primordium | 1.13e-14 | 23 |
early pharyngeal endoderm | 1.13e-14 | 23 |
mixed endoderm/mesoderm-derived structure | 2.55e-14 | 35 |
pharynx | 6.82e-14 | 24 |
gland of gut | 6.82e-14 | 24 |
upper respiratory tract | 6.82e-14 | 24 |
chordate pharynx | 6.82e-14 | 24 |
pharyngeal arch system | 6.82e-14 | 24 |
pharyngeal region of foregut | 6.82e-14 | 24 |
segment of respiratory tract | 6.72e-12 | 27 |
respiratory tract | 8.79e-11 | 41 |
respiratory system | 2.08e-10 | 42 |
lateral plate mesoderm | 4.01e-09 | 87 |
craniocervical region | 5.91e-08 | 36 |