FFCP PHASE1:Hg19::chr7:116140090..116140138,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=858 | |EntrezGene=858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1528 | |HGNC=1528 | ||
|TSSclassifier=strong | |||
|UniProt=P51636 | |UniProt=P51636 | ||
|association_with_transcript=0bp_to_ENST00000495841,NM_001206748_5end | |association_with_transcript=0bp_to_ENST00000495841,NM_001206748_5end | ||
|cluster_id=chr7:116140090..116140138,+ | |||
|coexpression_cluster_id=C2874 | |coexpression_cluster_id=C2874 | ||
|description=CAGE_peak_4_at_CAV2_5end | |description=CAGE_peak_4_at_CAV2_5end | ||
|id=chr7:116140090..116140138,+ | |id=chr7:116140090..116140138,+ | ||
|ontology_enrichment_celltype=CL:0000076!1.10e-16!62;CL:0000220!2.66e-15!246;CL:0002321!1.03e-14!248;CL:0000066!1.27e-14!254;CL:0002139!2.01e-13!24;CL:0000213!6.48e-13!57;CL:0000215!6.48e-13!57;CL:0000222!1.25e-12!119;CL:0000115!5.06e-10!35;CL:0000071!8.15e-10!18;CL:0002546!8.15e-10!18;CL:0002078!1.22e-07!44;CL:0000057!3.02e-07!75 | |ontology_enrichment_celltype=CL:0000076!1.10e-16!62;CL:0000220!2.66e-15!246;CL:0002321!1.03e-14!248;CL:0000066!1.27e-14!254;CL:0002139!2.01e-13!24;CL:0000213!6.48e-13!57;CL:0000215!6.48e-13!57;CL:0000222!1.25e-12!119;CL:0000115!5.06e-10!35;CL:0000071!8.15e-10!18;CL:0002546!8.15e-10!18;CL:0002078!1.22e-07!44;CL:0000057!3.02e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.34e-18;24!CL:0000071;7.62e-13;18!CL:0000115;2.27e-12;36!CL:0000213;2.86e-10;58!CL:0000215;2.86e-10;58!CL:0000076;3.33e-08;63!CL:0002078;1.18e-07;45!CL:1000413;4.86e-07;9!CL:0000349;9.55e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,5.65e-18,63;CL:0002139,8.65e-18,24;CL:0000213,2.78e-17,58;CL:0000215,2.78e-17,58;CL:0000115,1.12e-14,36;CL:0000066,3.04e-13,253;CL:0000071,5.84e-13,18;CL:0002546,5.84e-13,18;CL:0002078,1.21e-10,45;CL:0000222,2.75e-10,121;CL:0002321,1.21e-07,250;CL:0000349,4.13e-07,19;CL:1000413,5.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;7.62e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.15e-10!18;UBERON:0004638!8.15e-10!18;UBERON:0004852!8.15e-10!18;UBERON:0002049!8.78e-10!79;UBERON:0007798!8.78e-10!79;UBERON:0000487!1.01e-09!22;UBERON:0000468!1.71e-09!659;UBERON:0000055!1.99e-09!69;UBERON:0002100!5.75e-09!216;UBERON:0004872!8.29e-09!84;UBERON:0004923!1.05e-08!57;UBERON:0003102!1.70e-08!95;UBERON:0000490!3.29e-08!138;UBERON:0000467!5.93e-08!625;UBERON:0005631!8.51e-08!14;UBERON:0000158!8.51e-08!14;UBERON:0000480!8.68e-08!626;UBERON:0006914!1.02e-07!25;UBERON:0003104!1.56e-07!238;UBERON:0009142!1.56e-07!238;UBERON:0005156!1.76e-07!59;UBERON:0000990!1.76e-07!59;UBERON:0000119!2.07e-07!312;UBERON:0001981!2.21e-07!60;UBERON:0007500!2.21e-07!60;UBERON:0004537!2.21e-07!60;UBERON:0006965!2.21e-07!60;UBERON:0005256!2.82e-07!143;UBERON:0000483!3.13e-07!309;UBERON:0004119!3.19e-07!169;UBERON:0000925!3.19e-07!169;UBERON:0006595!3.19e-07!169;UBERON:0003100!3.89e-07!41;UBERON:0003914!4.24e-07!118;UBERON:0003134!9.59e-07!37;UBERON:0000474!9.59e-07!37 | |ontology_enrichment_uberon=UBERON:0001986!8.15e-10!18;UBERON:0004638!8.15e-10!18;UBERON:0004852!8.15e-10!18;UBERON:0002049!8.78e-10!79;UBERON:0007798!8.78e-10!79;UBERON:0000487!1.01e-09!22;UBERON:0000468!1.71e-09!659;UBERON:0000055!1.99e-09!69;UBERON:0002100!5.75e-09!216;UBERON:0004872!8.29e-09!84;UBERON:0004923!1.05e-08!57;UBERON:0003102!1.70e-08!95;UBERON:0000490!3.29e-08!138;UBERON:0000467!5.93e-08!625;UBERON:0005631!8.51e-08!14;UBERON:0000158!8.51e-08!14;UBERON:0000480!8.68e-08!626;UBERON:0006914!1.02e-07!25;UBERON:0003104!1.56e-07!238;UBERON:0009142!1.56e-07!238;UBERON:0005156!1.76e-07!59;UBERON:0000990!1.76e-07!59;UBERON:0000119!2.07e-07!312;UBERON:0001981!2.21e-07!60;UBERON:0007500!2.21e-07!60;UBERON:0004537!2.21e-07!60;UBERON:0006965!2.21e-07!60;UBERON:0005256!2.82e-07!143;UBERON:0000483!3.13e-07!309;UBERON:0004119!3.19e-07!169;UBERON:0000925!3.19e-07!169;UBERON:0006595!3.19e-07!169;UBERON:0003100!3.89e-07!41;UBERON:0003914!4.24e-07!118;UBERON:0003134!9.59e-07!37;UBERON:0000474!9.59e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.62e-13;18!UBERON:0001986;7.62e-13;18!UBERON:0004852;7.62e-13;18!UBERON:0000487;2.17e-11;22!UBERON:0006914;3.61e-09;25!UBERON:0005631;3.70e-08;10!UBERON:0000158;3.70e-08;10!UBERON:0000490;4.77e-08;33!UBERON:0003915;4.86e-07;9!UBERON:0004700;4.86e-07;9!UBERON:0001917;4.86e-07;9 | |||
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| ||
|short_description=p4@CAV2 | |short_description=p4@CAV2 | ||
}} | }} |
Latest revision as of 07:20, 25 September 2015
Short description: | p4@CAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAV2_5end |
Coexpression cluster: | C2874_mature_neuroblastoma_oral_pharyngeal_normal_neuroectodermal_mesothelioma |
Association with transcript: | 0bp_to_ENST00000495841, NM_001206748_5end |
EntrezGene: | CAV2 |
HGNC: | 1528 |
UniProt: | P51636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 5.65e-18 | 63 |
endothelial cell of vascular tree | 8.65e-18 | 24 |
lining cell | 2.78e-17 | 58 |
barrier cell | 2.78e-17 | 58 |
endothelial cell | 1.12e-14 | 36 |
epithelial cell | 3.04e-13 | 253 |
blood vessel endothelial cell | 5.84e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.84e-13 | 18 |
meso-epithelial cell | 1.21e-10 | 45 |
mesodermal cell | 2.75e-10 | 121 |
embryonic cell | 1.21e-07 | 250 |
extraembryonic cell | 4.13e-07 | 19 |
endothelial cell of artery | 5.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.84e-13 | 18 |
endothelium | 5.84e-13 | 18 |
cardiovascular system endothelium | 5.84e-13 | 18 |
simple squamous epithelium | 8.46e-12 | 22 |
vessel | 3.85e-10 | 68 |
extraembryonic membrane | 6.97e-10 | 14 |
membranous layer | 6.97e-10 | 14 |
organ component layer | 9.39e-10 | 66 |
squamous epithelium | 1.64e-09 | 25 |
vasculature | 4.29e-08 | 78 |
vascular system | 4.29e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 8.06e-08 | 83 |
epithelial tube open at both ends | 2.94e-07 | 59 |
blood vessel | 2.94e-07 | 59 |
blood vasculature | 2.94e-07 | 59 |
vascular cord | 2.94e-07 | 59 |
unilaminar epithelium | 3.81e-07 | 148 |
endothelial tube | 5.08e-07 | 9 |
arterial system endothelium | 5.08e-07 | 9 |
endothelium of artery | 5.08e-07 | 9 |