FFCP PHASE1:Hg19::chr3:146187346..146187359,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57047 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16494 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRY7,B4DXC3 | |||
|association_with_transcript=-258bp_to_ENST00000497985,NM_001199978_5end | |||
|cluster_id=chr3:146187346..146187359,- | |||
|description=CAGE_peak_1_at_PLSCR2_5end | |||
|id=chr3:146187346..146187359,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.97e-19;1!CL:1000415;2.60e-10;2!CL:0000082;3.88e-09;19!CL:0000322;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.88e-19,1;CL:1000415,1.89e-10,2;CL:0000082,3.83e-09,19;CL:0000322,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.64e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1324;2.06e-11;15!DOID:1325;3.14e-11;7!DOID:3904;3.14e-11;7!DOID:0050615;9.75e-11;16!DOID:3910;2.60e-10;2!DOID:3905;6.10e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.03e-11,15;DOID:1325,3.48e-11,7;DOID:3904,3.48e-11,7;DOID:0050615,9.59e-11,16;DOID:3910,2.27e-10,2;DOID:3905,6.61e-09,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.91e-15!115;UBERON:0003296!1.18e-07!4;UBERON:0010133!1.18e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.18e-19;1!UBERON:0003296;3.74e-19;4!UBERON:0010133;3.74e-19;4!UBERON:0001894;2.24e-11;7!UBERON:0001905;1.43e-10;2!UBERON:0002757;1.43e-10;2!UBERON:0010134;1.43e-10;2!UBERON:0005408;1.43e-10;2!UBERON:0001899;1.43e-10;2!UBERON:0000341;2.60e-10;2!UBERON:0000007;2.60e-10;2!UBERON:0004903;2.60e-10;2!UBERON:0002173;2.60e-10;2!UBERON:0002186;2.60e-10;2!UBERON:0004802;3.88e-09;19!UBERON:0000115;3.88e-09;19!UBERON:0000058;3.25e-08;10!UBERON:0002048;5.72e-08;22!UBERON:0004807;5.72e-08;22!UBERON:0000117;5.72e-08;22!UBERON:0000171;5.72e-08;22!UBERON:0000170;5.72e-08;22!UBERON:0006947;1.99e-07;3!UBERON:0004054;1.99e-07;3!UBERON:0002110;2.71e-07;3!UBERON:0004821;2.71e-07;3!UBERON:0007499;2.71e-07;3!UBERON:0003215;2.71e-07;3!UBERON:0010368;2.71e-07;3!UBERON:0009911;2.71e-07;3!UBERON:0002299;2.71e-07;3!UBERON:0002114;2.71e-07;2!UBERON:0006524;2.71e-07;3!UBERON:0008874;2.71e-07;3!UBERON:0002169;2.71e-07;3!UBERON:0004894;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.08e-19,1;UBERON:0003296,4.29e-19,4;UBERON:0010133,4.29e-19,4;UBERON:0001894,2.42e-11,7;UBERON:0006222,2.42e-11,7;UBERON:0001905,1.43e-10,2;UBERON:0002757,1.43e-10,2;UBERON:0010134,1.43e-10,2;UBERON:0005408,1.43e-10,2;UBERON:0001899,1.43e-10,2;UBERON:0004903,2.27e-10,2;UBERON:0002173,2.27e-10,2;UBERON:0002186,2.27e-10,2;UBERON:0000341,2.49e-10,2;UBERON:0000007,2.99e-10,2;UBERON:0004802,3.83e-09,19;UBERON:0000115,3.83e-09,19;UBERON:0002048,5.66e-08,22;UBERON:0000117,5.66e-08,22;UBERON:0000171,5.66e-08,22;UBERON:0000170,5.66e-08,22;UBERON:0005597,5.66e-08,22;UBERON:0000118,5.66e-08,22;UBERON:0006947,1.93e-07,3;UBERON:0004054,1.93e-07,3;UBERON:0002110,2.19e-07,3;UBERON:0006242,2.19e-07,3;UBERON:0004821,2.47e-07,3;UBERON:0003215,2.47e-07,3;UBERON:0010368,2.47e-07,3;UBERON:0009911,2.47e-07,3;UBERON:0002299,2.47e-07,3;UBERON:0006524,2.47e-07,3;UBERON:0008874,2.47e-07,3;UBERON:0002169,2.47e-07,3;UBERON:0004894,2.47e-07,3;UBERON:0002114,3.16e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0,0,0.977766799900771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0.759059076058509,0.318565414324097,0.651083453856419,0,0.752875595388864,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,0.307160702099232,0,0,0,0,0,0.398495976502139,0.552567831062295,0.755798243562828,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0.442317039724898,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,1.75996244461323,0,0.426905989478705,0.19980960958213,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0.942324577501406,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0.535701835878287,3.36283722218824,1.21393120847326,0.682986574053893,0,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0.235479278551542,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,0,1.40363678077263,0,0,0,0,1.05673990496671,0.154348316215889,0.437119121007915,2.35158648180761,0,0.235676547101626,0.392616934229891,0,0,0,0.187967835959707,0.128915775947154,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,0,0,0.378893491091197,0.267964130156178,0,0,0.426467963801962,1.42838658878244,0.0645889098360061,0.248298857183432,0,0.636471582781649,0.404234377916439,0.217716747896961,0,0.202056159043763,0.430333232356058,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p1@PLSCR2 | |||
}} |
Latest revision as of 06:52, 25 September 2015
Short description: | p1@PLSCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLSCR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -258bp_to_ENST00000497985, NM_001199978_5end |
EntrezGene: | PLSCR2 |
HGNC: | 16494 |
UniProt: | Q9NRY7B4DXC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.88e-19 | 1 |
epithelial cell of gall bladder | 1.89e-10 | 2 |
epithelial cell of lung | 3.83e-09 | 19 |
pneumocyte | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.08e-19 | 1 |
gland of diencephalon | 4.29e-19 | 4 |
neuroendocrine gland | 4.29e-19 | 4 |
diencephalon | 2.42e-11 | 7 |
future diencephalon | 2.42e-11 | 7 |
pineal body | 1.43e-10 | 2 |
regional part of epithalamus | 1.43e-10 | 2 |
secretory circumventricular organ | 1.43e-10 | 2 |
circumventricular organ | 1.43e-10 | 2 |
epithalamus | 1.43e-10 | 2 |
bronchoalveolar duct junction | 2.27e-10 | 2 |
alveolar duct | 2.27e-10 | 2 |
bronchiole | 2.27e-10 | 2 |
throat | 2.49e-10 | 2 |
pituitary gland | 2.99e-10 | 2 |
respiratory tract epithelium | 3.83e-09 | 19 |
lung epithelium | 3.83e-09 | 19 |
lung | 5.66e-08 | 22 |
respiratory tube | 5.66e-08 | 22 |
respiration organ | 5.66e-08 | 22 |
pair of lungs | 5.66e-08 | 22 |
lung primordium | 5.66e-08 | 22 |
lung bud | 5.66e-08 | 22 |
male genital duct | 1.93e-07 | 3 |
internal male genitalia | 1.93e-07 | 3 |
gallbladder | 2.19e-07 | 3 |
gall bladder primordium | 2.19e-07 | 3 |
pulmonary alveolus epithelium | 2.47e-07 | 3 |
alveolus | 2.47e-07 | 3 |
pulmonary lobule | 2.47e-07 | 3 |
lobule | 2.47e-07 | 3 |
alveolus of lung | 2.47e-07 | 3 |
alveolar system | 2.47e-07 | 3 |
pulmonary acinus | 2.47e-07 | 3 |
alveolar sac | 2.47e-07 | 3 |
alveolar wall | 2.47e-07 | 3 |
duodenum | 3.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.03e-11 | 15 |
bronchus cancer | 3.48e-11 | 7 |
bronchogenic carcinoma | 3.48e-11 | 7 |
respiratory system cancer | 9.59e-11 | 16 |
lung adenocarcinoma | 2.27e-10 | 2 |
lung carcinoma | 6.61e-09 | 9 |