FFCP PHASE1:Hg19::chr5:140868633..140868666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56097 | |EntrezGene=56097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8718 | |HGNC=8718 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5F6 | |UniProt=Q9Y5F6 | ||
|association_with_transcript=-141bp_to_ENST00000252087,NM_018929,NM_032407,uc003lla.1,uc011dbc.1_5end | |association_with_transcript=-141bp_to_ENST00000252087,NM_018929,NM_032407,uc003lla.1,uc011dbc.1_5end | ||
|cluster_id=chr5:140868633..140868666,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_PCDHGC5_5end | |description=CAGE_peak_2_at_PCDHGC5_5end | ||
|id=chr5:140868633..140868666,+ | |id=chr5:140868633..140868666,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.89e-12!180;CL:0000680!8.38e-10!57;CL:0000056!8.38e-10!57;CL:0000355!8.38e-10!57;CL:0000192!1.21e-09!42;CL:0000514!1.21e-09!42;CL:0000187!1.39e-08!54;CL:0000183!1.18e-07!59;CL:0000359!2.08e-07!32;CL:0000393!2.35e-07!60;CL:0000211!2.35e-07!60 | |ontology_enrichment_celltype=CL:0000055!7.89e-12!180;CL:0000680!8.38e-10!57;CL:0000056!8.38e-10!57;CL:0000355!8.38e-10!57;CL:0000192!1.21e-09!42;CL:0000514!1.21e-09!42;CL:0000187!1.39e-08!54;CL:0000183!1.18e-07!59;CL:0000359!2.08e-07!32;CL:0000393!2.35e-07!60;CL:0000211!2.35e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.80e-08;3!DOID:127;5.80e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.20e-08,3;DOID:127,3.20e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-35!57;UBERON:0005068!1.57e-35!57;UBERON:0006241!1.57e-35!57;UBERON:0007135!1.57e-35!57;UBERON:0001017!1.39e-31!82;UBERON:0000955!9.38e-31!69;UBERON:0006238!9.38e-31!69;UBERON:0002616!5.06e-30!59;UBERON:0005743!6.31e-30!86;UBERON:0000073!2.23e-28!94;UBERON:0001016!2.23e-28!94;UBERON:0002780!2.36e-28!41;UBERON:0001890!2.36e-28!41;UBERON:0006240!2.36e-28!41;UBERON:0003080!2.54e-27!42;UBERON:0001893!1.81e-25!34;UBERON:0002020!5.03e-25!34;UBERON:0003528!5.03e-25!34;UBERON:0002791!2.04e-24!33;UBERON:0001869!7.68e-24!32;UBERON:0003075!9.43e-24!86;UBERON:0007284!9.43e-24!86;UBERON:0002346!1.43e-22!90;UBERON:0000033!3.62e-20!123;UBERON:0000475!1.29e-19!365;UBERON:0000153!9.03e-19!129;UBERON:0007811!9.03e-19!129;UBERON:0003056!9.97e-18!61;UBERON:0000956!3.83e-17!25;UBERON:0000203!3.83e-17!25;UBERON:0002619!6.37e-16!22;UBERON:0007023!7.17e-16!115;UBERON:0004121!4.31e-15!169;UBERON:0000924!1.15e-14!173;UBERON:0006601!1.15e-14!173;UBERON:0001950!5.31e-14!20;UBERON:0000025!6.07e-14!194;UBERON:0000483!5.05e-13!309;UBERON:0000119!5.58e-13!312;UBERON:0004111!9.25e-12!241;UBERON:0002420!4.54e-10!9;UBERON:0007245!4.54e-10!9;UBERON:0010009!4.54e-10!9;UBERON:0010011!4.54e-10!9;UBERON:0000454!4.54e-10!9;UBERON:0000477!9.78e-10!286;UBERON:0002308!1.70e-09!9;UBERON:0000125!1.70e-09!9;UBERON:0000914!2.70e-09!83;UBERON:0002329!2.70e-09!83;UBERON:0003077!2.70e-09!83;UBERON:0003059!2.70e-09!83;UBERON:0007282!2.70e-09!83;UBERON:0009618!2.70e-09!83;UBERON:0007285!2.70e-09!83;UBERON:0003076!3.02e-09!15;UBERON:0003057!3.02e-09!15;UBERON:0000481!1.13e-08!347;UBERON:0001134!1.71e-08!61;UBERON:0002036!1.71e-08!61;UBERON:0003082!1.71e-08!61;UBERON:0002385!2.01e-08!63;UBERON:0001015!2.01e-08!63;UBERON:0000383!2.01e-08!63;UBERON:0004573!3.70e-08!33;UBERON:0004571!3.70e-08!33;UBERON:0000486!4.89e-08!82;UBERON:0009663!5.45e-08!7;UBERON:0004290!6.68e-08!70;UBERON:0000200!1.01e-07!6;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.37e-07!626;UBERON:0000468!4.50e-07!659;UBERON:0004733!4.97e-07!12;UBERON:0002028!4.97e-07!12;UBERON:0007277!4.97e-07!12;UBERON:0000349!8.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.52e-42;32!UBERON:0001893;4.72e-42;34!UBERON:0003528;4.25e-41;34!UBERON:0002020;4.25e-41;34!UBERON:0002619;1.12e-39;22!UBERON:0002791;6.93e-39;32!UBERON:0001950;6.69e-35;20!UBERON:0000956;1.95e-34;25!UBERON:0000203;1.95e-34;25!UBERON:0002780;3.19e-32;41!UBERON:0001890;3.19e-32;41!UBERON:0000073;1.19e-28;53!UBERON:0002616;1.19e-28;53!UBERON:0001017;3.15e-24;75!UBERON:0000955;6.93e-24;68!UBERON:0001016;6.91e-18;83!UBERON:0000200;1.43e-16;6!UBERON:0002420;9.07e-15;9!UBERON:0007245;9.07e-15;9!UBERON:0010009;9.07e-15;9!UBERON:0010011;9.07e-15;9!UBERON:0000454;9.07e-15;9!UBERON:0000349;2.74e-14;5!UBERON:0000125;7.20e-14;9!UBERON:0002308;7.20e-14;9!UBERON:0000369;6.01e-12;4!UBERON:0002435;6.01e-12;4!UBERON:0000204;6.01e-12;4!UBERON:0002298;2.44e-10;6!UBERON:0009663;4.69e-10;7!UBERON:0001871;4.82e-10;6!UBERON:0001872;2.32e-09;5!UBERON:0007023;2.46e-09;114!UBERON:0005383;2.63e-09;3!UBERON:0005382;2.63e-09;3!UBERON:0004733;2.69e-09;12!UBERON:0002028;2.69e-09;12!UBERON:0002021;3.57e-09;5!UBERON:0001870;3.58e-09;3!UBERON:0004732;1.69e-08;13!UBERON:0000988;5.19e-08;3!UBERON:0011216;2.08e-07;132!UBERON:0001876;9.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.06e-55,56;UBERON:0005068,1.06e-55,56;UBERON:0006241,1.06e-55,56;UBERON:0007135,1.06e-55,56;UBERON:0000073,6.55e-53,53;UBERON:0002616,6.55e-53,53;UBERON:0001017,3.93e-49,81;UBERON:0000955,6.27e-49,68;UBERON:0006238,6.27e-49,68;UBERON:0001016,6.83e-48,89;UBERON:0001893,7.53e-48,34;UBERON:0001869,3.23e-47,32;UBERON:0003528,7.07e-47,34;UBERON:0002020,7.07e-47,34;UBERON:0002780,4.74e-45,41;UBERON:0001890,4.74e-45,41;UBERON:0003080,4.74e-45,41;UBERON:0006240,4.74e-45,41;UBERON:0002791,3.73e-43,32;UBERON:0002619,1.08e-39,22;UBERON:0003075,5.04e-37,82;UBERON:0007284,5.04e-37,82;UBERON:0001950,6.74e-35,20;UBERON:0002346,8.21e-35,86;UBERON:0000956,1.89e-34,25;UBERON:0000203,1.89e-34,25;UBERON:0010371,2.24e-30,104;UBERON:0003056,9.07e-28,61;UBERON:0010314,3.83e-27,132;UBERON:0007023,6.66e-26,114;UBERON:0004121,5.33e-23,171;UBERON:0000924,5.33e-23,171;UBERON:0006601,5.33e-23,171;UBERON:0000025,8.51e-18,192;UBERON:0000200,1.35e-16,6;UBERON:0011216,1.42e-15,223;UBERON:0002420,8.77e-15,9;UBERON:0007245,8.77e-15,9;UBERON:0010009,8.77e-15,9;UBERON:0010011,8.77e-15,9;UBERON:0000454,8.77e-15,9;UBERON:0000349,2.58e-14,5;UBERON:0000125,1.15e-13,9;UBERON:0002308,1.15e-13,9;UBERON:0000369,5.96e-12,4;UBERON:0002435,5.96e-12,4;UBERON:0000204,5.96e-12,4;UBERON:0010082,5.96e-12,4;UBERON:0004111,7.36e-12,240;UBERON:0003076,1.05e-11,15;UBERON:0003057,1.05e-11,15;UBERON:0002298,4.32e-10,6;UBERON:0001871,4.58e-10,6;UBERON:0009663,4.58e-10,7;UBERON:0001872,2.36e-09,5;UBERON:0005383,2.60e-09,3;UBERON:0005382,2.60e-09,3;UBERON:0000483,3.47e-09,306;UBERON:0004733,3.50e-09,12;UBERON:0002028,3.50e-09,12;UBERON:0007277,3.50e-09,12;UBERON:0001870,3.60e-09,3;UBERON:0002021,3.74e-09,5;UBERON:0000119,5.57e-09,309;UBERON:0004732,2.14e-08,13;UBERON:0000988,9.73e-08,3;UBERON:0001876,9.01e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0.973269740605272,0.0945348171640679,0,0,3.99486180268024,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.506522046658319,0.662045904066094,0.573673241497627,1.41867352879343,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.717558542755448,0.213557388818567,0.423863802319124,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,1.18143432568886,0.292311015483596,1.00973509697646,0.552299391853796,0.323292113637624,3.19508633264953,1.0075209822764,1.01736355386293,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,2.52425656439839,0,0.100528972411631,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.503946384596579,0.850650583454319,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0,0,0.823240336780769,0.977208552881205,0,0,1.20575750823834,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0.358121926479791,0,0,0,0,2.03275699377971,0,0,0,0,0,0,0,0.12269149171914,0,0.813795071099207,0,0.178428988797162,0,0,0,0,0,1.32845119707087,0.921845842708516,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,1.07946785661859,0.710246901252508,0.739144404124282,2.07701771673448,0.697262270759755,0,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.170453254832202,0.267096106940212,0.330569830721956,0,0,0,0,1.25924938732256,0,0.924100740528266,0.532306030317022,0.869932992075073,1.11194531462352,0.143124886741991,0.372158369359667,0,0,0,0,2.54562598340749,0,0.179872457583315,0.274537029736055,0.117812402345686,1.2130948894399,0,1.26377536871694,0.48763373908959,0.243713489631284,1.05650146756755,0.136499911407986,0.282810863907425,3.39024349860728,0,0.66343897524122,0.876901770507525,1.15755106853338,0,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.7307917972497,6.33012373847307,0,0,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0,0,0,25.2026513984757,16.1416490801621,1.99613798001194,0,0,0,0,0,0,0,0.583209226766509,0,33.6581726609259,7.11518987889907,1.52581736317083,0.442317039724898,3.25102380848902,15.795748595086,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51587590970536,0,11.713222286267,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0.391969589657511,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.548167698587004,0.596143835108969,30.26256046691,0,0,0,0,0,0,0,0,0.869767748958028,0,0.407712618220842,0.418411385249333,0,1.15580235960608,4.80336230967832,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,17.4950531758047,4.90332262001672,0,0.137539436597234,0,0,0,40.1554569509543,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,1.62899880526114,1.72844298240254,4.24563568142232,0,0,1.19271615249795,0,0,0,1.0342636508924,1.05786081394152,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,18.6074317793067,14.7651780531375,4.63206443614049,2.29363678276028,0.887432412294818,3.10482014706917,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.378806010550178,0,0.889811221596536,0.228840068396924,1.05861646634267,1.24349760466224,0.443565449968902,0.796483835818512,0,0.776314784381297,1.24411862352257,1.06336685823198,0,0.601030435988874,0,4.47557806525128,0.181848659202559,0.751873899297419,0.928067519756987,0,0,1.71697852591396,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,4.97730370146231,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,11.4294300080483,0,0,0,0,0.123935764259002,2.23457967189298,0,0,0,0,0,34.4910938767988,5.6678630530234,3.19267718114303,15.1786109538159,0,35.9617712813933,15.9860889175533,0,0.392590874004102,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,31.4725144321719,14.8404838736631,6.20060389503552,24.8589975960115,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,0,0.857440047187092,5.029760240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| ||
|short_description=p2@PCDHGC5 | |short_description=p2@PCDHGC5 | ||
}} | }} |
Latest revision as of 04:38, 25 September 2015
Short description: | p2@PCDHGC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDHGC5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -141bp_to_ENST00000252087, NM_018929, NM_032407, uc003lla.1, uc011dbc.1_5end |
EntrezGene: | PCDHGC5 |
HGNC: | 8718 |
UniProt: | Q9Y5F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.20e-08 | 3 |
leiomyoma | 3.20e-08 | 3 |