FFCP PHASE1:Hg19::chr9:129677712..129677743,+: Difference between revisions
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|id=chr9:129677712..129677743,+
|short_description=p2@RALGPS1
|description=CAGE_peak_2_at_RALGPS1_5end
|association_with_transcript=0bp_to_ENST00000480993_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9649 | |EntrezGene=9649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16851 | |HGNC=16851 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480993_5end | |||
|cluster_id=chr9:129677712..129677743,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_RALGPS1_5end | |||
|id=chr9:129677712..129677743,+ | |||
|ontology_enrichment_celltype=CL:0000039!6.21e-07!7;CL:0000586!6.21e-07!7;CL:0002322!7.63e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.49e-10;2 | |||
|ontology_enrichment_disease=DOID:305!2.60e-15!106;DOID:0050687!5.45e-11!143;DOID:299!3.07e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3119;6.77e-11;14!DOID:299;7.10e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.84e-11,14;DOID:299,8.42e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0001007!4.90e-15!155;UBERON:0001555!4.90e-15!155;UBERON:0007026!4.90e-15!155;UBERON:0007023!9.00e-15!115;UBERON:0004119!1.68e-14!169;UBERON:0000925!1.68e-14!169;UBERON:0006595!1.68e-14!169;UBERON:0004921!2.73e-14!129;UBERON:0004185!2.73e-14!129;UBERON:0000077!2.61e-11!130;UBERON:0005911!1.81e-10!82;UBERON:0000466!4.56e-09!126;UBERON:0005156!6.67e-09!59;UBERON:0000990!6.67e-09!59;UBERON:0000464!7.42e-09!104;UBERON:0003101!9.66e-09!22;UBERON:0000079!9.66e-09!22;UBERON:0005153!1.55e-08!37;UBERON:0003135!5.30e-08!11;UBERON:0002294!1.12e-07!7;UBERON:0001173!1.12e-07!7;UBERON:0004912!1.12e-07!7;UBERON:0001041!1.84e-07!98;UBERON:0003133!2.92e-07!48;UBERON:0001004!6.74e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.75e-22;22!UBERON:0000160;4.45e-19;17!UBERON:0002108;3.21e-15;4!UBERON:0004921;5.28e-15;33!UBERON:0006947;9.49e-14;3!UBERON:0004054;9.49e-14;3!UBERON:0000058;1.20e-10;10!UBERON:0005904;1.96e-10;4!UBERON:0000007;1.97e-10;2!UBERON:0002114;5.32e-07;2!UBERON:0004175;7.72e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.94e-19,25;UBERON:0000160,5.16e-19,17;UBERON:0002108,4.24e-15,4;UBERON:0006947,8.00e-14,3;UBERON:0004054,8.00e-14,3;UBERON:0005904,1.73e-10,4;UBERON:0000007,2.12e-10,2;UBERON:0001007,1.34e-09,145;UBERON:0001555,1.34e-09,145;UBERON:0007026,1.34e-09,145;UBERON:0004119,2.99e-08,160;UBERON:0000925,2.99e-08,160;UBERON:0006595,2.99e-08,160;UBERON:0004921,5.69e-08,118;UBERON:0002114,6.76e-07,2;UBERON:0002110,8.55e-07,3;UBERON:0006242,8.55e-07,3 | |||
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| ||
|short_description=p2@RALGPS1 | |||
}} | }} |
Latest revision as of 03:35, 25 September 2015
Short description: | p2@RALGPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RALGPS1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000480993_5end |
EntrezGene: | RALGPS1 |
HGNC: | 16851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.94e-19 | 25 |
intestine | 5.16e-19 | 17 |
small intestine | 4.24e-15 | 4 |
male genital duct | 8.00e-14 | 3 |
internal male genitalia | 8.00e-14 | 3 |
duct of male reproductive system | 1.73e-10 | 4 |
pituitary gland | 2.12e-10 | 2 |
digestive system | 1.34e-09 | 145 |
digestive tract | 1.34e-09 | 145 |
primitive gut | 1.34e-09 | 145 |
endoderm-derived structure | 2.99e-08 | 160 |
endoderm | 2.99e-08 | 160 |
presumptive endoderm | 2.99e-08 | 160 |
subdivision of digestive tract | 5.69e-08 | 118 |
duodenum | 6.76e-07 | 2 |
gallbladder | 8.55e-07 | 3 |
gall bladder primordium | 8.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.84e-11 | 14 |
adenocarcinoma | 8.42e-10 | 25 |