FFCP PHASE1:Hg19::chr5:140501416..140501427,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56131 | |EntrezGene=56131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8689 | |HGNC=8689 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5E5 | |UniProt=Q9Y5E5 | ||
|association_with_transcript=-153bp_to_ENST00000194152,NM_018938,uc003lip.1_5end | |association_with_transcript=-153bp_to_ENST00000194152,NM_018938,uc003lip.1_5end | ||
|cluster_id=chr5:140501416..140501427,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_PCDHB4_5end | |description=CAGE_peak_2_at_PCDHB4_5end | ||
|id=chr5:140501416..140501427,+ | |id=chr5:140501416..140501427,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.19e-22;82!UBERON:0010122;3.48e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.96e-80!115;UBERON:0001049!5.62e-57!57;UBERON:0005068!5.62e-57!57;UBERON:0006241!5.62e-57!57;UBERON:0007135!5.62e-57!57;UBERON:0001017!1.54e-52!82;UBERON:0005743!4.69e-51!86;UBERON:0000073!6.88e-50!94;UBERON:0001016!6.88e-50!94;UBERON:0002616!5.91e-47!59;UBERON:0000955!3.69e-43!69;UBERON:0006238!3.69e-43!69;UBERON:0003075!6.05e-42!86;UBERON:0007284!6.05e-42!86;UBERON:0002346!9.25e-41!90;UBERON:0003080!5.95e-40!42;UBERON:0002780!8.28e-39!41;UBERON:0001890!8.28e-39!41;UBERON:0006240!8.28e-39!41;UBERON:0001893!2.21e-32!34;UBERON:0002020!3.03e-32!34;UBERON:0003528!3.03e-32!34;UBERON:0002791!4.13e-31!33;UBERON:0001869!1.52e-29!32;UBERON:0004121!2.82e-29!169;UBERON:0000924!4.79e-29!173;UBERON:0006601!4.79e-29!173;UBERON:0000033!1.75e-27!123;UBERON:0000153!2.56e-27!129;UBERON:0007811!2.56e-27!129;UBERON:0003056!3.28e-25!61;UBERON:0002619!5.32e-24!22;UBERON:0001950!4.02e-21!20;UBERON:0000956!2.06e-20!25;UBERON:0000203!2.06e-20!25;UBERON:0003076!1.26e-17!15;UBERON:0003057!1.26e-17!15;UBERON:0000025!2.92e-15!194;UBERON:0004111!3.31e-15!241;UBERON:0002420!5.49e-14!9;UBERON:0007245!5.49e-14!9;UBERON:0010009!5.49e-14!9;UBERON:0010011!5.49e-14!9;UBERON:0000454!5.49e-14!9;UBERON:0002308!7.29e-14!9;UBERON:0000125!7.29e-14!9;UBERON:0004733!1.07e-13!12;UBERON:0002028!1.07e-13!12;UBERON:0007277!1.07e-13!12;UBERON:0002298!1.63e-12!8;UBERON:0004732!2.11e-12!13;UBERON:0000477!4.11e-12!286;UBERON:0000475!1.54e-11!365;UBERON:0009663!2.86e-11!7;UBERON:0000200!1.22e-09!6;UBERON:0002680!2.48e-09!9;UBERON:0001895!2.48e-09!9;UBERON:0010092!2.48e-09!9;UBERON:0000468!4.26e-09!659;UBERON:0000349!8.41e-09!5;UBERON:0000481!9.63e-09!347;UBERON:0000923!1.17e-08!604;UBERON:0005291!1.17e-08!604;UBERON:0006598!1.17e-08!604;UBERON:0002532!1.17e-08!604;UBERON:0002050!1.37e-08!605;UBERON:0005423!1.37e-08!605;UBERON:0000922!1.37e-08!612;UBERON:0000062!1.70e-08!511;UBERON:0000467!3.82e-08!625;UBERON:0002021!3.92e-08!5;UBERON:0000480!4.44e-08!626;UBERON:0001894!9.52e-08!7;UBERON:0006222!9.52e-08!7;UBERON:0000119!1.44e-07!312;UBERON:0000369!1.96e-07!4;UBERON:0002435!1.96e-07!4;UBERON:0000204!1.96e-07!4;UBERON:0010082!1.96e-07!4;UBERON:0000483!2.08e-07!309;UBERON:0001871!6.35e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!7.96e-80!115;UBERON:0001049!5.62e-57!57;UBERON:0005068!5.62e-57!57;UBERON:0006241!5.62e-57!57;UBERON:0007135!5.62e-57!57;UBERON:0001017!1.54e-52!82;UBERON:0005743!4.69e-51!86;UBERON:0000073!6.88e-50!94;UBERON:0001016!6.88e-50!94;UBERON:0002616!5.91e-47!59;UBERON:0000955!3.69e-43!69;UBERON:0006238!3.69e-43!69;UBERON:0003075!6.05e-42!86;UBERON:0007284!6.05e-42!86;UBERON:0002346!9.25e-41!90;UBERON:0003080!5.95e-40!42;UBERON:0002780!8.28e-39!41;UBERON:0001890!8.28e-39!41;UBERON:0006240!8.28e-39!41;UBERON:0001893!2.21e-32!34;UBERON:0002020!3.03e-32!34;UBERON:0003528!3.03e-32!34;UBERON:0002791!4.13e-31!33;UBERON:0001869!1.52e-29!32;UBERON:0004121!2.82e-29!169;UBERON:0000924!4.79e-29!173;UBERON:0006601!4.79e-29!173;UBERON:0000033!1.75e-27!123;UBERON:0000153!2.56e-27!129;UBERON:0007811!2.56e-27!129;UBERON:0003056!3.28e-25!61;UBERON:0002619!5.32e-24!22;UBERON:0001950!4.02e-21!20;UBERON:0000956!2.06e-20!25;UBERON:0000203!2.06e-20!25;UBERON:0003076!1.26e-17!15;UBERON:0003057!1.26e-17!15;UBERON:0000025!2.92e-15!194;UBERON:0004111!3.31e-15!241;UBERON:0002420!5.49e-14!9;UBERON:0007245!5.49e-14!9;UBERON:0010009!5.49e-14!9;UBERON:0010011!5.49e-14!9;UBERON:0000454!5.49e-14!9;UBERON:0002308!7.29e-14!9;UBERON:0000125!7.29e-14!9;UBERON:0004733!1.07e-13!12;UBERON:0002028!1.07e-13!12;UBERON:0007277!1.07e-13!12;UBERON:0002298!1.63e-12!8;UBERON:0004732!2.11e-12!13;UBERON:0000477!4.11e-12!286;UBERON:0000475!1.54e-11!365;UBERON:0009663!2.86e-11!7;UBERON:0000200!1.22e-09!6;UBERON:0002680!2.48e-09!9;UBERON:0001895!2.48e-09!9;UBERON:0010092!2.48e-09!9;UBERON:0000468!4.26e-09!659;UBERON:0000349!8.41e-09!5;UBERON:0000481!9.63e-09!347;UBERON:0000923!1.17e-08!604;UBERON:0005291!1.17e-08!604;UBERON:0006598!1.17e-08!604;UBERON:0002532!1.17e-08!604;UBERON:0002050!1.37e-08!605;UBERON:0005423!1.37e-08!605;UBERON:0000922!1.37e-08!612;UBERON:0000062!1.70e-08!511;UBERON:0000467!3.82e-08!625;UBERON:0002021!3.92e-08!5;UBERON:0000480!4.44e-08!626;UBERON:0001894!9.52e-08!7;UBERON:0006222!9.52e-08!7;UBERON:0000119!1.44e-07!312;UBERON:0000369!1.96e-07!4;UBERON:0002435!1.96e-07!4;UBERON:0000204!1.96e-07!4;UBERON:0010082!1.96e-07!4;UBERON:0000483!2.08e-07!309;UBERON:0001871!6.35e-07!7 | ||
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|short_description=p2@PCDHB4 | |short_description=p2@PCDHB4 | ||
}} | }} |
Latest revision as of 03:22, 25 September 2015
Short description: | p2@PCDHB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDHB4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -153bp_to_ENST00000194152, NM_018938, uc003lip.1_5end |
EntrezGene: | PCDHB4 |
HGNC: | 8689 |
UniProt: | Q9Y5E5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data