FFCP PHASE1:Hg19::chr5:138719013..138719023,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:138719013..138719023,-
|short_description=p4@SLC23A1
|description=CAGE_peak_4_at_SLC23A1_5end
|association_with_transcript=15bp_to_ENST00000339881,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9963 | |EntrezGene=9963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10974 | |HGNC=10974 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZC8,Q9UHI7 | |UniProt=C9IZC8,Q9UHI7 | ||
|association_with_transcript=15bp_to_ENST00000339881,ENST00000453898,NM_005847,NM_152685,uc003leg.2,uc003leh.2_5end | |||
|cluster_id=chr5:138719013..138719023,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_SLC23A1_5end | |||
|id=chr5:138719013..138719023,- | |||
|ontology_enrichment_celltype=CL:0000181!3.61e-25!12;CL:0000417!3.61e-25!12;CL:0000668!3.61e-25!12;CL:0000414!3.61e-25!12;CL:0000412!3.61e-25!12;CL:0000182!3.61e-25!12;CL:0002150!1.35e-14!3;CL:0000861!1.35e-14!3;CL:0000223!7.18e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.02e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.40e-25,12;CL:0000223,2.44e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.61e-18;11!UBERON:0009497;1.53e-15;13!UBERON:0001041;2.35e-10;30!UBERON:0003104;5.44e-10;31 | |||
|ontology_enrichment_disease=DOID:4468!1.39e-10!2;DOID:305!3.60e-09!106;DOID:0050687!9.78e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.41e-24!19;UBERON:0006925!2.41e-24!19;UBERON:0008836!2.41e-24!19;UBERON:0009854!8.26e-24!23;UBERON:0009497!1.04e-21!25;UBERON:0000015!1.04e-21!25;UBERON:0002423!1.04e-21!25;UBERON:0006235!1.04e-21!25;UBERON:0004161!1.04e-21!25;UBERON:0009856!8.37e-21!26;UBERON:0008835!9.25e-21!22;UBERON:0003894!9.25e-21!22;UBERON:0007499!4.90e-18!25;UBERON:0005057!2.87e-17!26;UBERON:0003929!5.99e-17!54;UBERON:0005172!9.35e-17!55;UBERON:0005173!9.35e-17!55;UBERON:0002417!8.86e-15!61;UBERON:0000916!8.86e-15!61;UBERON:0004921!1.57e-14!129;UBERON:0004185!1.57e-14!129;UBERON:0002365!3.59e-14!31;UBERON:0002330!3.59e-14!31;UBERON:0001007!1.90e-12!155;UBERON:0001555!1.90e-12!155;UBERON:0007026!1.90e-12!155;UBERON:0002368!2.48e-12!35;UBERON:0005911!1.16e-11!82;UBERON:0004119!5.55e-11!169;UBERON:0000925!5.55e-11!169;UBERON:0006595!5.55e-11!169;UBERON:0005177!1.17e-10!107;UBERON:0000160!5.44e-10!27;UBERON:0002530!1.68e-09!59;UBERON:0000949!3.58e-09!45;UBERON:0009569!1.07e-08!113;UBERON:0001155!1.15e-08!9;UBERON:0000077!6.12e-08!130;UBERON:0005409!1.71e-07!35;UBERON:0000059!4.21e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.27e-31;19!UBERON:0006925;2.27e-31;19!UBERON:0002423;9.74e-24;25!UBERON:0002365;3.39e-19;31!UBERON:0002330;3.39e-19;31!UBERON:0002368;2.37e-16;33!UBERON:0000949;5.34e-12;43!UBERON:0000160;2.76e-11;17!UBERON:0002108;5.70e-11;4!UBERON:0005172;1.74e-10;52!UBERON:0005173;1.74e-10;52!UBERON:0001007;2.35e-09;81!UBERON:0002417;5.68e-09;58!UBERON:0000916;5.68e-09;58!UBERON:0005409;6.98e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.86e-31,19;UBERON:0006925,2.86e-31,19;UBERON:0008836,2.86e-31,19;UBERON:0008835,5.98e-27,22;UBERON:0003894,5.98e-27,22;UBERON:0009854,9.28e-26,23;UBERON:0007499,1.16e-23,25;UBERON:0009497,1.16e-23,25;UBERON:0000015,1.16e-23,25;UBERON:0002423,1.16e-23,25;UBERON:0006235,1.16e-23,25;UBERON:0004161,1.16e-23,25;UBERON:0009856,9.81e-23,26;UBERON:0002365,5.44e-19,31;UBERON:0002330,5.44e-19,31;UBERON:0002368,9.19e-17,35;UBERON:0005172,6.54e-14,54;UBERON:0005173,6.54e-14,54;UBERON:0003929,6.90e-14,54;UBERON:0004921,1.53e-13,118;UBERON:0000949,6.42e-13,45;UBERON:0002417,1.93e-12,60;UBERON:0000916,1.93e-12,60;UBERON:0000160,2.44e-11,17;UBERON:0005911,2.88e-11,82;UBERON:0002108,5.03e-11,4;UBERON:0001007,9.37e-11,145;UBERON:0001555,9.37e-11,145;UBERON:0007026,9.37e-11,145;UBERON:0002530,1.02e-09,59;UBERON:0004119,1.32e-09,160;UBERON:0000925,1.32e-09,160;UBERON:0006595,1.32e-09,160;UBERON:0005177,5.77e-09,101;UBERON:0001041,2.48e-08,87;UBERON:0009569,5.58e-08,112;UBERON:0005409,6.46e-08,25 | |||
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|short_description=p4@SLC23A1 | |||
}} | }} |
Latest revision as of 00:09, 25 September 2015
Short description: | p4@SLC23A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC23A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 15bp_to_ENST00000339881, ENST00000453898, NM_005847, NM_152685, uc003leg.2, uc003leh.2_5end |
EntrezGene: | SLC23A1 |
HGNC: | 10974 |
UniProt: | C9IZC8Q9UHI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.40e-25 | 12 |
endodermal cell | 2.44e-07 | 58 |