FFCP PHASE1:Hg19::chr11:108464321..108464380,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30578 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NEV8,Q149M6 | |||
|association_with_transcript=0bp_to_ENST00000265843,NM_015065,uc001pkk.2_5end | |||
|cluster_id=chr11:108464321..108464380,- | |||
|description=CAGE_peak_1_at_EXPH5_5end | |||
|id=chr11:108464321..108464380,- | |||
|ontology_enrichment_celltype=CL:0000066!2.92e-27!254;CL:0002076!1.02e-11!43;CL:0000223!4.84e-11!59;CL:0002251!1.47e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;5.07e-10;20!CL:0002076;2.22e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.75e-26,253;CL:0002076,2.90e-11,42;CL:0000223,1.96e-10,58;CL:0002251,6.49e-10,20;CL:0000076,6.45e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.59e-09;29!UBERON:0006595;3.04e-08;86 | |||
|ontology_enrichment_disease=DOID:305!4.33e-30!106;DOID:0050687!9.85e-22!143;DOID:162!9.74e-13!235;DOID:14566!3.12e-12!239;DOID:1749!8.59e-10!14;DOID:299!5.58e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.67e-13;14!DOID:305;3.17e-10;106!DOID:299;8.83e-09;25!DOID:0050615;8.82e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.55e-32,106;DOID:0050687,2.88e-22,143;DOID:162,1.71e-13,235;DOID:1749,4.46e-13,14;DOID:14566,4.99e-13,239;DOID:299,8.63e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.31e-18!169;UBERON:0000925!9.31e-18!169;UBERON:0006595!9.31e-18!169;UBERON:0001007!3.88e-15!155;UBERON:0001555!3.88e-15!155;UBERON:0007026!3.88e-15!155;UBERON:0004921!9.92e-14!129;UBERON:0004185!9.92e-14!129;UBERON:0000077!3.86e-13!130;UBERON:0001004!2.43e-11!72;UBERON:0005911!1.70e-09!82;UBERON:0000065!2.83e-09!53;UBERON:0001041!6.19e-09!98;UBERON:0005153!1.08e-08!37;UBERON:0000064!1.85e-08!219;UBERON:0008947!4.88e-08!38;UBERON:0003258!4.88e-08!38;UBERON:0000344!6.94e-07!12;UBERON:0000072!7.99e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.65e-08;33!UBERON:0000344;9.12e-08;20!UBERON:0005409;1.43e-07;22!UBERON:0000160;7.30e-07;17!UBERON:0004807;8.44e-07;22!UBERON:0002048;9.10e-07;22!UBERON:0000117;9.10e-07;22!UBERON:0000171;9.10e-07;22!UBERON:0000170;9.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.01e-19,160;UBERON:0000925,3.01e-19,160;UBERON:0006595,3.01e-19,160;UBERON:0001007,3.15e-17,145;UBERON:0001555,3.15e-17,145;UBERON:0007026,3.15e-17,145;UBERON:0004921,9.13e-15,118;UBERON:0005911,1.09e-10,82;UBERON:0005153,5.67e-10,37;UBERON:0001004,7.88e-09,74;UBERON:0005631,4.06e-08,14;UBERON:0000158,4.06e-08,14;UBERON:0001041,4.92e-08,87;UBERON:0000344,8.53e-08,20;UBERON:0003124,1.00e-07,7;UBERON:0000160,4.92e-07,17;UBERON:0008947,5.06e-07,38;UBERON:0003258,5.06e-07,38;UBERON:0000161,7.18e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,1.64249310087461,1.00434111675842,6.80079311156766,6.07544361929599,7.9497889126816,0,0,0.619264493264304,0,0.90361775633475,1.10926203050036,0,0,0,0,0.401088894940283,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,3.540775862049,1.57204305099666,1.85041349099558,0,4.56291173287027,5.20792586308207,0,0.222820913770347,0,0,0,0.128091319725675,0,0.164437904603676,0,0.579606171470105,2.81744470007915,3.47803076516627,1.04535523804977,0.566546713487831,0.766440987203842,0.68725489096526,0,0.95569624297229,0.651083453856419,0,1.50575119077773,1.27986611154418,0,0.710331756132051,0,2.41928091869679,0.802320587350522,1.88271725047639,0,0,0,0,0,0.144846518960824,0,0,0.945348171640679,1.10864698731282,0.790513071238134,1.63723844372141,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.3082821564276,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,5.60456474173561,7.36414525595254,9.17774705244812,1.09776335516636,0.530119073285941,0.580969714347592,0.932949495138334,0.756962552626885,0,0,0,0,0,0,1.18306800039844,1.68584690078102,1.92808823906786,1.32352767278873,0.435758888184812,0.949082476444386,1.34831308160164,1.17732879075208,0.769494313892781,0,0,0,0,7.60530208930985,1.96565443335525,3.54473944008842,1.7658523976586,7.2563178740437,0.171567810298526,11.9627811095402,3.37205259772859,6.23279628952111,5.83307204498736,0,0,0,0.115930404975077,0.469634776943287,0,0,0,2.37061319387782,0,0,0,0,2.81201501960331,6.38332087155666,5.10390350072591,4.47792613514241,2.90633938513962,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,1.20575750823834,2.61460037580088,1.59956785891291,0,0,0,0,0,0,0.144781306667579,0,0,0,1.57624608161542,0.431255149719035,0.513372145118994,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.74709290462411,3.33440328590885,8.32177197552485,4.23346410661552,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,3.62578348774867,2.00506470303285,5.80110230296147,0,0,0.131124414959424,1.35359883872224,6.16122696835318,0,0,3.27210049567915,0,0,0.215915916102139,0,0,0,2.03901018436031,0.831076008928724,1.11937377361089,0,0,0.512900250232778,0,0.976135183992909,43.9985119735774,0.457847324091717,0.660075999364704,3.44559322797703,1.30012049207304,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0.826424576804891,0.960950336825531,3.82838137483752,3.6416801107998,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,2.79044126903985,0.670302275535787,0,43.0237169549881,0,0,0.886860307073351,1.83778720165568,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.640944426764839,0,13.4772118789567,0,0,2.06311345710401,0.956557636372934,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0.166849141711909,0,3.34087408674291,0,0.270455678475983,0,0,8.42132431836989,0,0,0,2.55722532125772,45.6001965848988,17.8178808499583,28.5659452952286,0,0.281338832821026,0.222617410045812,0,1.26675244876796,1.19548792950642,3.86797481743607,8.56571342704538,0.818149460017238,0.246169610922139,0,35.6777354054888,22.3776468344511,0,1.97286811273867,0,0,0,0.185536196323703,0,3.64598865519327,17.4045399992429,1.44999915086959,10.696584138837,17.5435018702009,1.65471377237555,0,0.291604613383254,0,0.885741385813839,1.68835014075571,0,0.774054819518572,1.77328571372128,0.219385397153973,1.74301541630384,19.2404767104473,2.15460723810632,0.227884111694002,4.84184199214926,2.78248697670294,23.7937744509198,18.1830661047194,4.76307485689684,11.72676507241,1.02193298195737,0,0,3.15833924864053,3.13700054908383,3.85989650044438,3.03605972358696,0,6.96293612942489,10.9365981466629,6.36088821452734,10.8194319871046,5.97157158647103,3.89213283814692,10.9985426088053,0,0,0.208843899010911,0.404406797884062,0,0.702793337176017,0,8.60924323301195,0.242780379534093,0.789168805698781,1.20990716048664,0.30607276163049,0.063186579628488,5.41164309892173,4.56228042147887,0,0.330991955875499,0,0,5.97680046662565,0,5.20679215005393,4.70363507589013,8.44474303829905,2.97035336011451,0.171986032471617,1.74161396320353,3.65446585430928,1.56019368401098,4.84945082442097,0,2.03382666702479,0.274083849293502,0,0.126621591911757,6.6487470129833,14.9896993870368,1.28071796843612,0.999048047910651,3.45817001169854,0,0,3.74542474769189,0,2.59263438078475,0,0,0.203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| |||
|short_description=p1@EXPH5 | |||
}} |
Latest revision as of 00:02, 25 September 2015
Short description: | p1@EXPH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EXPH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265843, NM_015065, uc001pkk.2_5end |
EntrezGene: | EXPH5 |
HGNC: | 30578 |
UniProt: | Q8NEV8Q149M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.75e-26 | 253 |
endo-epithelial cell | 2.90e-11 | 42 |
endodermal cell | 1.96e-10 | 58 |
epithelial cell of alimentary canal | 6.49e-10 | 20 |
squamous epithelial cell | 6.45e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.01e-19 | 160 |
endoderm | 3.01e-19 | 160 |
presumptive endoderm | 3.01e-19 | 160 |
digestive system | 3.15e-17 | 145 |
digestive tract | 3.15e-17 | 145 |
primitive gut | 3.15e-17 | 145 |
subdivision of digestive tract | 9.13e-15 | 118 |
endo-epithelium | 1.09e-10 | 82 |
epithelial bud | 5.67e-10 | 37 |
respiratory system | 7.88e-09 | 74 |
extraembryonic membrane | 4.06e-08 | 14 |
membranous layer | 4.06e-08 | 14 |
foregut | 4.92e-08 | 87 |
mucosa | 8.53e-08 | 20 |
chorion | 1.00e-07 | 7 |
intestine | 4.92e-07 | 17 |
respiratory primordium | 5.06e-07 | 38 |
endoderm of foregut | 5.06e-07 | 38 |
orifice | 7.18e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.55e-32 | 106 |
cell type cancer | 2.88e-22 | 143 |
cancer | 1.71e-13 | 235 |
squamous cell carcinoma | 4.46e-13 | 14 |
disease of cellular proliferation | 4.99e-13 | 239 |
adenocarcinoma | 8.63e-09 | 25 |