FFCP PHASE1:Hg19::chr4:118955591..118955612,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:118955591..118955612,+ to FFCP PHASE1:Hg19::chr4:118955591..118955612,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9348 | |EntrezGene=9348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7682 | |HGNC=7682 | ||
|TSSclassifier=strong | |||
|UniProt=B4DI67 | |UniProt=B4DI67 | ||
|association_with_transcript=-36bp_to_ENST00000433996_5end | |||
|cluster_id=chr4:118955591..118955612,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_NDST3_5end | |||
|id=chr4:118955591..118955612,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.78e-29;3!UBERON:0010122;7.41e-20;2!UBERON:0006601;2.92e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-81!57;UBERON:0005068!2.21e-81!57;UBERON:0006241!2.21e-81!57;UBERON:0007135!2.21e-81!57;UBERON:0002616!1.40e-67!59;UBERON:0001017!4.11e-66!82;UBERON:0005743!1.61e-65!86;UBERON:0000955!3.56e-61!69;UBERON:0006238!3.56e-61!69;UBERON:0002346!2.48e-60!90;UBERON:0002780!1.75e-59!41;UBERON:0001890!1.75e-59!41;UBERON:0006240!1.75e-59!41;UBERON:0000073!3.53e-58!94;UBERON:0001016!3.53e-58!94;UBERON:0003075!5.24e-58!86;UBERON:0007284!5.24e-58!86;UBERON:0003080!7.05e-58!42;UBERON:0002020!4.63e-55!34;UBERON:0003528!4.63e-55!34;UBERON:0001893!1.47e-54!34;UBERON:0001869!2.01e-54!32;UBERON:0002791!3.60e-52!33;UBERON:0007023!7.44e-45!115;UBERON:0002619!1.00e-42!22;UBERON:0003056!5.71e-40!61;UBERON:0001950!1.40e-37!20;UBERON:0000956!4.00e-37!25;UBERON:0000203!4.00e-37!25;UBERON:0000153!2.51e-34!129;UBERON:0007811!2.51e-34!129;UBERON:0000033!4.90e-33!123;UBERON:0000924!3.25e-30!173;UBERON:0006601!3.25e-30!173;UBERON:0004121!2.82e-28!169;UBERON:0003076!1.65e-23!15;UBERON:0003057!1.65e-23!15;UBERON:0002420!1.06e-19!9;UBERON:0007245!1.06e-19!9;UBERON:0010009!1.06e-19!9;UBERON:0010011!1.06e-19!9;UBERON:0000454!1.06e-19!9;UBERON:0002308!1.98e-19!9;UBERON:0000125!1.98e-19!9;UBERON:0000025!9.37e-18!194;UBERON:0004733!2.47e-17!12;UBERON:0002028!2.47e-17!12;UBERON:0007277!2.47e-17!12;UBERON:0000200!1.79e-16!6;UBERON:0004732!7.49e-16!13;UBERON:0000349!8.47e-15!5;UBERON:0009663!1.45e-14!7;UBERON:0001872!2.34e-13!5;UBERON:0004111!8.16e-13!241;UBERON:0000369!1.34e-12!4;UBERON:0002435!1.34e-12!4;UBERON:0000204!1.34e-12!4;UBERON:0010082!1.34e-12!4;UBERON:0001871!3.90e-12!7;UBERON:0000477!9.33e-12!286;UBERON:0002298!1.61e-11!8;UBERON:0002680!3.31e-11!9;UBERON:0001895!3.31e-11!9;UBERON:0010092!3.31e-11!9;UBERON:0000483!1.27e-10!309;UBERON:0000119!2.11e-10!312;UBERON:0000064!3.09e-10!219;UBERON:0005383!5.54e-10!3;UBERON:0005382!5.54e-10!3;UBERON:0000988!4.62e-09!3;UBERON:0002771!5.15e-09!3;UBERON:0000475!9.69e-09!365;UBERON:0002021!1.05e-08!5;UBERON:0001896!3.01e-08!3;UBERON:0005290!3.01e-08!3;UBERON:0010096!3.01e-08!3;UBERON:0002240!4.53e-08!3;UBERON:0001873!3.36e-07!2;UBERON:0010122!3.36e-07!2;UBERON:0000007!4.61e-07!2;UBERON:0001876!6.31e-07!2;UBERON:0001954!6.49e-07!2;UBERON:0003022!6.49e-07!2;UBERON:0002421!6.49e-07!2;UBERON:0002600!6.49e-07!2;UBERON:0001894!7.51e-07!7;UBERON:0006222!7.51e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;1.18e-44;5!UBERON:0000369;2.28e-37;4!UBERON:0002435;2.28e-37;4!UBERON:0000204;2.28e-37;4!UBERON:0002420;2.45e-36;9!UBERON:0007245;2.45e-36;9!UBERON:0010009;2.45e-36;9!UBERON:0010011;2.45e-36;9!UBERON:0000454;2.45e-36;9!UBERON:0002791;2.90e-36;32!UBERON:0001869;5.86e-35;32!UBERON:0003528;1.39e-33;34!UBERON:0002020;1.39e-33;34!UBERON:0002780;3.08e-33;41!UBERON:0001890;3.08e-33;41!UBERON:0001893;1.64e-30;34!UBERON:0000073;5.61e-30;53!UBERON:0002616;5.61e-30;53!UBERON:0005383;6.13e-29;3!UBERON:0005382;6.13e-29;3!UBERON:0002619;7.80e-24;22!UBERON:0009663;1.68e-21;7!UBERON:0000956;5.58e-21;25!UBERON:0000203;5.58e-21;25!UBERON:0000955;1.02e-20;68!UBERON:0001873;7.41e-20;2!UBERON:0000007;1.72e-19;2!UBERON:0001876;4.52e-19;2!UBERON:0001954;5.69e-19;2!UBERON:0003022;5.69e-19;2!UBERON:0002421;5.69e-19;2!UBERON:0002600;5.69e-19;2!UBERON:0000125;8.78e-17;9!UBERON:0002308;8.78e-17;9!UBERON:0001017;9.88e-16;75!UBERON:0001950;6.94e-15;20!UBERON:0002037;1.10e-14;6!UBERON:0001016;3.69e-13;83!UBERON:0001871;3.75e-12;6!UBERON:0001874;7.06e-11;1!UBERON:0001882;3.15e-10;1!UBERON:0005403;3.15e-10;1!UBERON:0003296;3.23e-10;4!UBERON:0010133;3.23e-10;4!UBERON:0002680;5.74e-10;9!UBERON:0001895;5.74e-10;9!UBERON:0007023;1.23e-07;114!UBERON:0004733;1.36e-07;12!UBERON:0002028;1.36e-07;12!UBERON:0004732;4.83e-07;13!UBERON:0000200;7.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.05e-46,53;UBERON:0002616,6.05e-46,53;UBERON:0000349,9.01e-45,5;UBERON:0001049,2.16e-43,56;UBERON:0005068,2.16e-43,56;UBERON:0006241,2.16e-43,56;UBERON:0007135,2.16e-43,56;UBERON:0002780,6.59e-40,41;UBERON:0001890,6.59e-40,41;UBERON:0003080,6.59e-40,41;UBERON:0006240,6.59e-40,41;UBERON:0000369,1.50e-37,4;UBERON:0002435,1.50e-37,4;UBERON:0000204,1.50e-37,4;UBERON:0010082,1.50e-37,4;UBERON:0002791,1.95e-37,32;UBERON:0001869,1.95e-37,32;UBERON:0002420,1.98e-36,9;UBERON:0007245,1.98e-36,9;UBERON:0010009,1.98e-36,9;UBERON:0010011,1.98e-36,9;UBERON:0000454,1.98e-36,9;UBERON:0003528,3.41e-35,34;UBERON:0002020,3.41e-35,34;UBERON:0001893,3.41e-35,34;UBERON:0000955,7.54e-35,68;UBERON:0006238,7.54e-35,68;UBERON:0002346,1.06e-34,86;UBERON:0003075,1.31e-32,82;UBERON:0007284,1.31e-32,82;UBERON:0003056,2.72e-30,61;UBERON:0005383,5.59e-29,3;UBERON:0005382,5.59e-29,3;UBERON:0001017,5.62e-29,81;UBERON:0001016,7.02e-26,89;UBERON:0010371,3.38e-25,104;UBERON:0002619,8.70e-24,22;UBERON:0007023,5.50e-23,114;UBERON:0009663,1.33e-21,7;UBERON:0000956,6.14e-21,25;UBERON:0000203,6.14e-21,25;UBERON:0001873,6.44e-20,2;UBERON:0010122,6.44e-20,2;UBERON:0000007,1.80e-19,2;UBERON:0010314,2.69e-19,132;UBERON:0001876,4.96e-19,2;UBERON:0001954,5.44e-19,2;UBERON:0003022,5.44e-19,2;UBERON:0002421,5.44e-19,2;UBERON:0002600,5.44e-19,2;UBERON:0000125,7.32e-17,9;UBERON:0002308,7.32e-17,9;UBERON:0004121,6.81e-16,171;UBERON:0000924,6.81e-16,171;UBERON:0006601,6.81e-16,171;UBERON:0001950,7.67e-15,20;UBERON:0002037,1.15e-14,6;UBERON:0006215,1.15e-14,6;UBERON:0001871,4.29e-12,6;UBERON:0000025,7.01e-11,192;UBERON:0001874,7.40e-11,1;UBERON:0001882,2.28e-10,1;UBERON:0005403,2.28e-10,1;UBERON:0003296,3.30e-10,4;UBERON:0010133,3.30e-10,4;UBERON:0002680,5.92e-10,9;UBERON:0001895,5.92e-10,9;UBERON:0010092,5.92e-10,9;UBERON:0011216,8.05e-09,223;UBERON:0004111,3.86e-08,240;UBERON:0004733,1.39e-07,12;UBERON:0002028,1.39e-07,12;UBERON:0007277,1.39e-07,12;UBERON:0004732,4.93e-07,13;UBERON:0000200,7.75e-07,6 | |||
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| ||
|short_description=p5@NDST3 | |||
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Latest revision as of 21:01, 24 September 2015
Short description: | p5@NDST3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NDST3_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -36bp_to_ENST00000433996_5end |
EntrezGene: | NDST3 |
HGNC: | 7682 |
UniProt: | B4DI67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data