FFCP PHASE1:Hg19::chr14:60975883..60975911,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10892 | |||
|TSSclassifier=strong | |||
|UniProt=O95475,Q6P051 | |||
|association_with_transcript=-26bp_to_NM_007374,uc001xfa.3_5end | |||
|cluster_id=chr14:60975883..60975911,+ | |||
|coexpression_cluster_id=C1726 | |||
|description=CAGE_peak_1_at_SIX6_5end | |||
|id=chr14:60975883..60975911,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.28e-22!5;CL:0000064!2.69e-15!3;CL:0005012!2.69e-15!3;CL:0000067!2.69e-15!3;CL:0002304!2.69e-15!3;CL:0000075!9.62e-13!27;CL:0000306!1.77e-11!4;CL:0002222!1.77e-11!4;CL:0002224!1.77e-11!4;CL:0000133!2.42e-08!59;CL:0000710!5.38e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.02e-32;3!CL:0000067;1.02e-32;3!CL:0005012;1.02e-32;3!CL:0002304;1.02e-32;3!CL:0000306;1.64e-24;4!CL:0002222;1.64e-24;4!CL:0002224;1.64e-24;4!CL:0000075;3.30e-24;27!CL:0000710;3.36e-13;20!CL:0000342;1.63e-11;1!CL:0002565;1.63e-11;1!CL:0002321;2.55e-11;15!CL:0002322;2.52e-09;5!CL:0000333;3.44e-09;5!CL:0002077;2.18e-07;34!CL:0000147;3.15e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.02e-32,3;CL:0000067,1.02e-32,3;CL:0005012,1.02e-32,3;CL:0002304,1.02e-32,3;CL:0000306,1.78e-24,4;CL:0002222,1.78e-24,4;CL:0002224,1.78e-24,4;CL:0000075,3.35e-24,27;CL:0000710,3.32e-13,20;CL:0000342,1.47e-11,1;CL:0002565,1.47e-11,1;CL:0002322,2.47e-09,5;CL:0000133,8.79e-08,59;CL:0002077,1.02e-07,34;CL:0000147,3.05e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.98e-15;3!UBERON:0005425;1.19e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.41e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.71e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002104!3.19e-25!21;UBERON:0000970!5.96e-22!20;UBERON:0001032!8.89e-22!24;UBERON:0004456!8.89e-22!24;UBERON:0007625!1.31e-20!11;UBERON:0000488!1.44e-19!4;UBERON:0000020!7.97e-19!23;UBERON:0000019!9.76e-19!19;UBERON:0000047!9.76e-19!19;UBERON:0004088!9.76e-19!19;UBERON:0003072!9.76e-19!19;UBERON:0003071!9.76e-19!19;UBERON:0004128!9.76e-19!19;UBERON:0001456!8.60e-17!21;UBERON:0001801!5.64e-16!14;UBERON:0001778!2.69e-15!3;UBERON:0001775!2.69e-15!3;UBERON:0003056!1.77e-13!61;UBERON:0002203!4.48e-13!6;UBERON:0001768!4.48e-13!6;UBERON:0005085!1.07e-11!29;UBERON:0010077!1.77e-11!4;UBERON:0005389!1.77e-11!4;UBERON:0000484!1.77e-11!4;UBERON:0002546!1.77e-11!4;UBERON:0000965!1.77e-11!4;UBERON:0001803!1.77e-11!4;UBERON:0003073!1.77e-11!4;UBERON:0005426!1.77e-11!4;UBERON:0003296!2.18e-11!4;UBERON:0010133!2.18e-11!4;UBERON:0000007!8.68e-11!2;UBERON:0002200!1.61e-10!11;UBERON:0006876!1.61e-10!11;UBERON:0003075!5.27e-10!86;UBERON:0007284!5.27e-10!86;UBERON:0005162!7.97e-10!2;UBERON:0000122!7.97e-10!2;UBERON:0004121!9.84e-10!169;UBERON:0002346!2.07e-09!90;UBERON:0000924!2.17e-09!173;UBERON:0006601!2.17e-09!173;UBERON:0000073!2.90e-08!94;UBERON:0001016!2.90e-08!94;UBERON:0001444!6.09e-08!48;UBERON:0000033!8.63e-08!123;UBERON:0000153!2.95e-07!129;UBERON:0007811!2.95e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002104;1.28e-48;21!UBERON:0007625;2.36e-46;11!UBERON:0000488;2.05e-42;4!UBERON:0001032;2.14e-42;24!UBERON:0004456;2.14e-42;24!UBERON:0000970;1.61e-41;20!UBERON:0001801;2.55e-36;14!UBERON:0000020;5.63e-36;23!UBERON:0000019;1.39e-34;19!UBERON:0000047;1.39e-34;19!UBERON:0004088;1.39e-34;19!UBERON:0010230;1.39e-34;19!UBERON:0001778;1.02e-32;3!UBERON:0001775;1.02e-32;3!UBERON:0001456;3.24e-31;21!UBERON:0002203;2.03e-28;6!UBERON:0001768;2.03e-28;6!UBERON:0002200;2.03e-28;6!UBERON:0010077;1.64e-24;4!UBERON:0005389;1.64e-24;4!UBERON:0000484;1.64e-24;4!UBERON:0000965;1.64e-24;4!UBERON:0001803;1.64e-24;4!UBERON:0003296;2.64e-24;4!UBERON:0010133;2.64e-24;4!UBERON:0000007;1.85e-22;2!UBERON:0010371;8.66e-16;31!UBERON:0006876;1.20e-15;11!UBERON:0001894;3.63e-14;7!UBERON:0000941;1.19e-11;1!UBERON:0001785;1.19e-11;1!UBERON:0002464;1.19e-11;1!UBERON:0004904;1.19e-11;1!UBERON:0001021;1.19e-11;1!UBERON:0002506;1.63e-11;1!UBERON:0001769;1.63e-11;1!UBERON:0000010;6.84e-11;8!UBERON:0001444;2.40e-09;48!UBERON:0000013;3.44e-09;5!UBERON:0002410;3.44e-09;5!UBERON:0000033;1.23e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.18e-48,21;UBERON:0002104,1.18e-48,21;UBERON:0007625,2.36e-46,11;UBERON:0000488,1.84e-42,4;UBERON:0000020,2.00e-42,24;UBERON:0001032,2.00e-42,24;UBERON:0004456,2.00e-42,24;UBERON:0000019,2.19e-41,20;UBERON:0000047,2.19e-41,20;UBERON:0010312,2.19e-41,20;UBERON:0004088,2.19e-41,20;UBERON:0010230,2.19e-41,20;UBERON:0003072,2.19e-41,20;UBERON:0004128,2.19e-41,20;UBERON:0003071,2.19e-41,20;UBERON:0001456,1.56e-37,22;UBERON:0001801,2.55e-36,14;UBERON:0001778,1.02e-32,3;UBERON:0001775,1.02e-32,3;UBERON:0002203,1.89e-28,6;UBERON:0001768,1.89e-28,6;UBERON:0002200,1.89e-28,6;UBERON:0005085,2.43e-26,31;UBERON:0010077,1.78e-24,4;UBERON:0005389,1.78e-24,4;UBERON:0000484,1.78e-24,4;UBERON:0002546,1.78e-24,4;UBERON:0000965,1.78e-24,4;UBERON:0001803,1.78e-24,4;UBERON:0003073,1.78e-24,4;UBERON:0005426,1.78e-24,4;UBERON:0003296,2.86e-24,4;UBERON:0010133,2.86e-24,4;UBERON:0003056,1.12e-22,61;UBERON:0000007,1.85e-22,2;UBERON:0003075,1.66e-16,82;UBERON:0007284,1.66e-16,82;UBERON:0001444,2.90e-16,49;UBERON:0002346,1.15e-15,86;UBERON:0006876,1.15e-15,11;UBERON:0001894,3.80e-14,7;UBERON:0006222,3.80e-14,7;UBERON:0000033,4.33e-14,56;UBERON:0010371,1.11e-12,104;UBERON:0000153,1.29e-12,62;UBERON:0007811,1.29e-12,62;UBERON:0000076,1.49e-12,8;UBERON:0000941,1.07e-11,1;UBERON:0001785,1.07e-11,1;UBERON:0002464,1.07e-11,1;UBERON:0004904,1.07e-11,1;UBERON:0001021,1.07e-11,1;UBERON:0003902,1.07e-11,1;UBERON:0005425,1.07e-11,1;UBERON:0002506,1.47e-11,1;UBERON:0001769,1.47e-11,1;UBERON:0000010,6.84e-11,8;UBERON:0004121,9.73e-10,171;UBERON:0000924,9.73e-10,171;UBERON:0006601,9.73e-10,171;UBERON:0010314,1.24e-09,132;UBERON:0000013,3.59e-09,5;UBERON:0002410,3.59e-09,5;UBERON:0000966,7.33e-08,6;UBERON:0005388,7.33e-08,6;UBERON:0001802,7.33e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.3205621604156,14.6341402325292,27.2287835648691,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,5.11253348625881,7.67091807113741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,0,0,0,0,0,0,7.21656710126366,33.6198174427723,7.27933904262094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6971419094768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.821425535170343,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47997066212368,2.20172318598255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,27.3134521906484,24.5875166659401,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14631118071926,0.316027223465453,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SIX6 | |||
}} |
Latest revision as of 20:47, 24 September 2015
Short description: | p1@SIX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIX6_5end |
Coexpression cluster: | C1726_acute_Lens_pituitary_Ciliary_eye_H9_retina |
Association with transcript: | -26bp_to_NM_007374, uc001xfa.3_5end |
EntrezGene: | SIX6 |
HGNC: | 10892 |
UniProt: | O95475Q6P051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.02e-32 | 3 |
ciliated epithelial cell | 1.02e-32 | 3 |
multi-ciliated epithelial cell | 1.02e-32 | 3 |
non-pigmented ciliary epithelial cell | 1.02e-32 | 3 |
crystallin accumulating cell | 1.78e-24 | 4 |
vertebrate lens cell | 1.78e-24 | 4 |
lens epithelial cell | 1.78e-24 | 4 |
columnar/cuboidal epithelial cell | 3.35e-24 | 27 |
neurecto-epithelial cell | 3.32e-13 | 20 |
pigment cell (sensu Vertebrata) | 1.47e-11 | 1 |
iris pigment epithelial cell | 1.47e-11 | 1 |
embryonic stem cell | 2.47e-09 | 5 |
neurectodermal cell | 8.79e-08 | 59 |
ecto-epithelial cell | 1.02e-07 | 34 |
pigment cell | 3.05e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.71e-08 | 6 |