FFCP PHASE1:Hg19::chr22:39868762..39868785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4248 | |EntrezGene=4248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7046 | |HGNC=7046 | ||
|TSSclassifier=strong | |||
|UniProt=B0QY93 | |UniProt=B0QY93 | ||
|association_with_transcript=-7bp_to_ENST00000429402_5end | |association_with_transcript=-7bp_to_ENST00000429402_5end | ||
|cluster_id=chr22:39868762..39868785,+ | |||
|description=CAGE_peak_3_at_MGAT3_5end | |description=CAGE_peak_3_at_MGAT3_5end | ||
|id=chr22:39868762..39868785,+ | |id=chr22:39868762..39868785,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.95e-08!7;CL:0000586!2.95e-08!7 | |ontology_enrichment_celltype=CL:0000039!2.95e-08!7;CL:0000586!2.95e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.65e-15;19!CL:0002541;7.64e-13;3!CL:0002537;8.15e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.71e-15,19;CL:0002541,7.65e-13,3;CL:0002537,8.16e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.52e-12!25;DOID:162!1.34e-07!235;DOID:14566!3.72e-07!239;DOID:305!3.87e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.03e-08;2!DOID:3119;9.91e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.20e-09,2;DOID:3119,9.42e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.61e-13!14;UBERON:0000158!3.61e-13!14;UBERON:0005409!1.26e-09!35;UBERON:0000478!5.11e-09!24;UBERON:0000160!5.29e-09!27;UBERON:0003124!6.33e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.38e-22;22!UBERON:0000160;2.28e-20;17!UBERON:0005631;1.35e-18;10!UBERON:0000158;1.35e-18;10!UBERON:0000478;3.34e-14;24!UBERON:0002108;3.22e-13;4!UBERON:0004921;6.07e-13;33!UBERON:0003124;7.64e-13;3!UBERON:0000920;7.64e-13;3!UBERON:0000305;4.03e-09;7!UBERON:0001987;7.59e-09;4!UBERON:0000059;8.55e-09;11!UBERON:0001155;4.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.62e-26,14;UBERON:0000158,8.62e-26,14;UBERON:0000160,2.01e-20,17;UBERON:0003124,2.33e-19,7;UBERON:0005409,2.61e-19,25;UBERON:0000478,3.31e-14,24;UBERON:0002108,3.17e-13,4;UBERON:0000920,7.65e-13,3;UBERON:0000305,3.82e-09,7;UBERON:0000059,7.87e-09,11;UBERON:0001987,8.03e-09,4;UBERON:0004340,8.03e-09,4;UBERON:0004871,5.28e-08,8;UBERON:0000995,8.47e-08,21;UBERON:0005795,2.11e-07,22;UBERON:0003975,2.11e-07,22;UBERON:0001155,3.89e-07,9 | |||
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| ||
|short_description=p3@MGAT3 | |short_description=p3@MGAT3 | ||
}} | }} |
Latest revision as of 18:47, 24 September 2015
Short description: | p3@MGAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MGAT3_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000429402_5end |
EntrezGene: | MGAT3 |
HGNC: | 7046 |
UniProt: | B0QY93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.71e-15 | 19 |
chorionic membrane mesenchymal stem cell | 7.65e-13 | 3 |
amnion mesenchymal stem cell | 8.16e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.62e-26 | 14 |
membranous layer | 8.62e-26 | 14 |
intestine | 2.01e-20 | 17 |
chorion | 2.33e-19 | 7 |
gastrointestinal system | 2.61e-19 | 25 |
extraembryonic structure | 3.31e-14 | 24 |
small intestine | 3.17e-13 | 4 |
egg chorion | 7.65e-13 | 3 |
amnion | 3.82e-09 | 7 |
large intestine | 7.87e-09 | 11 |
placenta | 8.03e-09 | 4 |
allantois | 8.03e-09 | 4 |
somatic layer of lateral plate mesoderm | 5.28e-08 | 8 |
uterus | 8.47e-08 | 21 |
embryonic uterus | 2.11e-07 | 22 |
internal female genitalia | 2.11e-07 | 22 |
colon | 3.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.20e-09 | 2 |
gastrointestinal system cancer | 9.42e-07 | 14 |