FFCP PHASE1:Hg19::chr20:21494577..21494588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4821 | |EntrezGene=4821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7835 | |HGNC=7835 | ||
|TSSclassifier=strong | |||
|UniProt=O95096 | |UniProt=O95096 | ||
|association_with_transcript=75bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | |association_with_transcript=75bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | ||
|cluster_id=chr20:21494577..21494588,- | |||
|coexpression_cluster_id=C4015 | |||
|description=CAGE_peak_4_at_NKX2-2_5end | |description=CAGE_peak_4_at_NKX2-2_5end | ||
|id=chr20:21494577..21494588,- | |id=chr20:21494577..21494588,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.00e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.11e-20;3!UBERON:0003057;5.11e-20;3!UBERON:0006601;6.77e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;2.23e-08;2!DOID:962;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.67e-08,2;DOID:962,2.67e-08,2 | |||
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|short_description=p4@NKX2-2 | |short_description=p4@NKX2-2 | ||
}} | }} |
Latest revision as of 18:08, 24 September 2015
Short description: | p4@NKX2-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NKX2-2_5end |
Coexpression cluster: | C4015_spinal_neuroectodermal_optic_osteosarcoma_corpus_neuroepithelioma_thalamus |
Association with transcript: | 75bp_to_ENST00000377142, NM_002509, uc002wsi.2_5end |
EntrezGene: | NKX2-2 |
HGNC: | 7835 |
UniProt: | O95096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.67e-08 | 2 |
neurofibroma | 2.67e-08 | 2 |