FFCP PHASE1:Hg19::chr20:21494577..21494588,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4821 | |EntrezGene=4821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7835 | |HGNC=7835 | ||
|TSSclassifier=strong | |||
|UniProt=O95096 | |UniProt=O95096 | ||
|association_with_transcript=75bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | |association_with_transcript=75bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | ||
|cluster_id=chr20:21494577..21494588,- | |||
|coexpression_cluster_id=C4015 | |||
|description=CAGE_peak_4_at_NKX2-2_5end | |description=CAGE_peak_4_at_NKX2-2_5end | ||
|id=chr20:21494577..21494588,- | |id=chr20:21494577..21494588,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.00e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.11e-20;3!UBERON:0003057;5.11e-20;3!UBERON:0006601;6.77e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.23e-08;2!DOID:962;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.67e-08,2;DOID:962,2.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.57e-67!57;UBERON:0005068!3.57e-67!57;UBERON:0006241!3.57e-67!57;UBERON:0007135!3.57e-67!57;UBERON:0002616!3.50e-56!59;UBERON:0001017!2.91e-53!82;UBERON:0000955!3.84e-53!69;UBERON:0006238!3.84e-53!69;UBERON:0005743!1.89e-50!86;UBERON:0002346!1.32e-48!90;UBERON:0002780!3.53e-48!41;UBERON:0001890!3.53e-48!41;UBERON:0006240!3.53e-48!41;UBERON:0003075!5.77e-48!86;UBERON:0007284!5.77e-48!86;UBERON:0000073!6.47e-48!94;UBERON:0001016!6.47e-48!94;UBERON:0003080!6.47e-47!42;UBERON:0001893!2.12e-44!34;UBERON:0002020!2.44e-44!34;UBERON:0003528!2.44e-44!34;UBERON:0002791!1.83e-41!33;UBERON:0007023!6.79e-39!115;UBERON:0001869!3.70e-38!32;UBERON:0003056!1.14e-30!61;UBERON:0000924!1.29e-30!173;UBERON:0006601!1.29e-30!173;UBERON:0000033!1.64e-30!123;UBERON:0002619!1.90e-30!22;UBERON:0004121!1.24e-29!169;UBERON:0001950!4.05e-29!20;UBERON:0000153!9.87e-29!129;UBERON:0007811!9.87e-29!129;UBERON:0000956!1.49e-26!25;UBERON:0000203!1.49e-26!25;UBERON:0002298!3.11e-24!8;UBERON:0003076!1.21e-20!15;UBERON:0003057!1.21e-20!15;UBERON:0002308!1.86e-20!9;UBERON:0000125!1.86e-20!9;UBERON:0000200!6.43e-16!6;UBERON:0004733!9.77e-16!12;UBERON:0002028!9.77e-16!12;UBERON:0007277!9.77e-16!12;UBERON:0002420!3.68e-15!9;UBERON:0007245!3.68e-15!9;UBERON:0010009!3.68e-15!9;UBERON:0010011!3.68e-15!9;UBERON:0000454!3.68e-15!9;UBERON:0004732!1.91e-14!13;UBERON:0000025!2.25e-14!194;UBERON:0009663!1.03e-13!7;UBERON:0001872!3.22e-13!5;UBERON:0001896!5.45e-13!3;UBERON:0005290!5.45e-13!3;UBERON:0010096!5.45e-13!3;UBERON:0000988!5.67e-13!3;UBERON:0006331!1.16e-12!3;UBERON:0001871!4.65e-12!7;UBERON:0002771!5.12e-12!3;UBERON:0004111!6.09e-11!241;UBERON:0000483!8.93e-10!309;UBERON:0000119!1.34e-09!312;UBERON:0001875!4.79e-09!2;UBERON:0006514!4.79e-09!2;UBERON:0001897!4.99e-09!2;UBERON:0002148!5.19e-09!2;UBERON:0009662!5.19e-09!2;UBERON:0000064!6.20e-09!219;UBERON:0000475!6.56e-09!365;UBERON:0000477!9.53e-09!286;UBERON:0000349!1.86e-07!5;UBERON:0002680!2.43e-07!9;UBERON:0001895!2.43e-07!9;UBERON:0010092!2.43e-07!9;UBERON:0000062!5.24e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.07e-37;6!UBERON:0002240;5.11e-20;3!UBERON:0005174;5.11e-20;3!UBERON:0001137;5.11e-20;3!UBERON:0000988;9.52e-20;3!UBERON:0001896;9.52e-20;3!UBERON:0005290;9.52e-20;3!UBERON:0004733;4.50e-19;12!UBERON:0002028;4.50e-19;12!UBERON:0004732;1.23e-17;13!UBERON:0002336;7.45e-16;1!UBERON:0011215;7.45e-16;1!UBERON:0001018;7.45e-16;1!UBERON:0002473;7.45e-16;1!UBERON:0005340;7.45e-16;1!UBERON:0003544;7.45e-16;1!UBERON:0005970;7.45e-16;1!UBERON:0002316;7.45e-16;1!UBERON:0001020;7.45e-16;1!UBERON:0002437;7.45e-16;1!UBERON:0002902;1.92e-15;1!UBERON:0009899;1.92e-15;1!UBERON:0000073;2.09e-12;53!UBERON:0002616;2.09e-12;53!UBERON:0001017;3.71e-10;75!UBERON:0001016;7.10e-09;83!UBERON:0001897;1.39e-08;2!UBERON:0005162;1.39e-08;2!UBERON:0000122;1.39e-08;2!UBERON:0010225;1.39e-08;2!UBERON:0002148;2.23e-08;2!UBERON:0003714;2.23e-08;2!UBERON:0001875;2.23e-08;2!UBERON:0006331;2.23e-08;2!UBERON:0009662;2.23e-08;2!UBERON:0006955;2.23e-08;2!UBERON:0004801;2.23e-08;2!UBERON:0006514;2.23e-08;2!UBERON:0000955;4.40e-08;68!UBERON:0002680;3.34e-07;9!UBERON:0000125;3.34e-07;9!UBERON:0002308;3.34e-07;9!UBERON:0001895;3.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,4.53e-38,6;UBERON:0003076,8.10e-34,15;UBERON:0003057,8.10e-34,15;UBERON:0001049,6.40e-29,56;UBERON:0005068,6.40e-29,56;UBERON:0006241,6.40e-29,56;UBERON:0007135,6.40e-29,56;UBERON:0002346,2.69e-22,86;UBERON:0001016,6.20e-21,89;UBERON:0000073,2.30e-20,53;UBERON:0002616,2.30e-20,53;UBERON:0000988,4.88e-20,3;UBERON:0002240,4.88e-20,3;UBERON:0005174,4.88e-20,3;UBERON:0001137,4.88e-20,3;UBERON:0001896,7.88e-20,3;UBERON:0005290,7.88e-20,3;UBERON:0010096,7.88e-20,3;UBERON:0001017,1.55e-19,81;UBERON:0003075,1.55e-19,82;UBERON:0007284,1.55e-19,82;UBERON:0004733,2.95e-19,12;UBERON:0002028,2.95e-19,12;UBERON:0007277,2.95e-19,12;UBERON:0004732,8.35e-18,13;UBERON:0002336,8.63e-16,1;UBERON:0011215,8.63e-16,1;UBERON:0001018,8.63e-16,1;UBERON:0002473,8.63e-16,1;UBERON:0005340,8.63e-16,1;UBERON:0003544,8.63e-16,1;UBERON:0005970,8.63e-16,1;UBERON:0002316,8.63e-16,1;UBERON:0001020,8.63e-16,1;UBERON:0002437,8.63e-16,1;UBERON:0000955,1.59e-15,68;UBERON:0006238,1.59e-15,68;UBERON:0002902,3.17e-15,1;UBERON:0009899,3.17e-15,1;UBERON:0010371,3.27e-15,104;UBERON:0007023,6.40e-14,114;UBERON:0004121,1.68e-12,171;UBERON:0000924,1.68e-12,171;UBERON:0006601,1.68e-12,171;UBERON:0010314,9.18e-12,132;UBERON:0001897,1.39e-08,2;UBERON:0010225,1.39e-08,2;UBERON:0005162,1.50e-08,2;UBERON:0000122,1.50e-08,2;UBERON:0002148,1.86e-08,2;UBERON:0006331,1.86e-08,2;UBERON:0009662,1.86e-08,2;UBERON:0006955,2.00e-08,2;UBERON:0004801,2.00e-08,2;UBERON:0002780,2.03e-08,41;UBERON:0001890,2.03e-08,41;UBERON:0003080,2.03e-08,41;UBERON:0006240,2.03e-08,41;UBERON:0001875,2.15e-08,2;UBERON:0006514,2.15e-08,2;UBERON:0003714,2.67e-08,2;UBERON:0000025,1.02e-07,192;UBERON:0011216,1.04e-07,223;UBERON:0002680,2.68e-07,9;UBERON:0001895,2.68e-07,9;UBERON:0010092,2.68e-07,9;UBERON:0000125,3.04e-07,9;UBERON:0002308,3.04e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08943512240099,0,0.937057782901357,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,1.14681839138014,0.554645257684261,1.30402446176905,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96594445628807,1.11728983594649,0,0,0,0,0,0.513833800771676,0,0,0.615349092722265,0,1.10651603942749,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0.994581110581374,0,0,0,0,0,0,0.540300676947157,0.781078098613847,1.03343398250592,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,1.83518279037446,0.920818829879887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,2.55201007249429,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08943512240099,0,0.937057782901357,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,1.14681839138014,0.554645257684261,1.30402446176905,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96594445628807,1.11728983594649,0,0,0,0,0,0.513833800771676,0,0,0.615349092722265,0,1.10651603942749,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0.994581110581374,0,0,0,0,0,0,0.540300676947157,0.781078098613847,1.03343398250592,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,1.83518279037446,0.920818829879887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,2.55201007249429,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@NKX2-2 | |short_description=p4@NKX2-2 | ||
}} | }} |
Latest revision as of 18:08, 24 September 2015
Short description: | p4@NKX2-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NKX2-2_5end |
Coexpression cluster: | C4015_spinal_neuroectodermal_optic_osteosarcoma_corpus_neuroepithelioma_thalamus |
Association with transcript: | 75bp_to_ENST00000377142, NM_002509, uc002wsi.2_5end |
EntrezGene: | NKX2-2 |
HGNC: | 7835 |
UniProt: | O95096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.67e-08 | 2 |
neurofibroma | 2.67e-08 | 2 |