FFCP PHASE1:Hg19::chr7:100609529..100609542,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=189bp_to_ENST00000480291_5end | |association_with_transcript=189bp_to_ENST00000480291_5end | ||
|cluster_id=chr7:100609529..100609542,+ | |||
|coexpression_cluster_id=C1459 | |coexpression_cluster_id=C1459 | ||
|description=CAGE_peak_22_at_MUC3A_5end,CAGE_peak_22_at_MUC3B_5end | |description=CAGE_peak_22_at_MUC3A_5end,CAGE_peak_22_at_MUC3B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.44e-20!5;CL:0000039!4.27e-09!7;CL:0000586!4.27e-09!7 | |ontology_enrichment_celltype=CL:0002322!1.44e-20!5;CL:0000039!4.27e-09!7;CL:0000586!4.27e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.51e-15;5 | |ontology_enrichment_celltype_v019=CL:0002537;1.51e-15;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.51e-15,5 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.47e-19;1!UBERON:0009847;3.15e-07;3!UBERON:0003353;3.15e-07;3 | |ontology_enrichment_development_v019=UBERON:0001045;2.47e-19;1!UBERON:0009847;3.15e-07;3!UBERON:0003353;3.15e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.25e-23!27;UBERON:0005409!4.71e-20!35;UBERON:0000059!1.16e-18!11;UBERON:0004907!4.76e-14!5;UBERON:0004921!1.91e-12!129;UBERON:0004185!1.91e-12!129;UBERON:0001155!4.40e-12!9;UBERON:0001052!3.19e-10!4;UBERON:0001046!5.63e-10!19;UBERON:0001007!1.92e-09!155;UBERON:0001555!1.92e-09!155;UBERON:0007026!1.92e-09!155;UBERON:0004119!3.57e-09!169;UBERON:0000925!3.57e-09!169;UBERON:0006595!3.57e-09!169;UBERON:0002108!8.06e-07!14 | |ontology_enrichment_uberon=UBERON:0000160!6.25e-23!27;UBERON:0005409!4.71e-20!35;UBERON:0000059!1.16e-18!11;UBERON:0004907!4.76e-14!5;UBERON:0004921!1.91e-12!129;UBERON:0004185!1.91e-12!129;UBERON:0001155!4.40e-12!9;UBERON:0001052!3.19e-10!4;UBERON:0001046!5.63e-10!19;UBERON:0001007!1.92e-09!155;UBERON:0001555!1.92e-09!155;UBERON:0007026!1.92e-09!155;UBERON:0004119!3.57e-09!169;UBERON:0000925!3.57e-09!169;UBERON:0006595!3.57e-09!169;UBERON:0002108!8.06e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.26e-48;17!UBERON:0000059;3.43e-41;11!UBERON:0005409;4.81e-38;22!UBERON:0001155;1.55e-32;9!UBERON:0004921;5.69e-24;33!UBERON:0001154;2.47e-19;1!UBERON:0001153;2.47e-19;1!UBERON:0009854;2.47e-19;1!UBERON:0004907;1.81e-15;5!UBERON:0002108;2.80e-15;4!UBERON:0000305;2.18e-11;7!UBERON:0001555;3.44e-10;54!UBERON:0005631;3.03e-08;10!UBERON:0000158;3.03e-08;10!UBERON:0001007;1.20e-07;81!UBERON:0002114;3.15e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.26e-48;17!UBERON:0000059;3.43e-41;11!UBERON:0005409;4.81e-38;22!UBERON:0001155;1.55e-32;9!UBERON:0004921;5.69e-24;33!UBERON:0001154;2.47e-19;1!UBERON:0001153;2.47e-19;1!UBERON:0009854;2.47e-19;1!UBERON:0004907;1.81e-15;5!UBERON:0002108;2.80e-15;4!UBERON:0000305;2.18e-11;7!UBERON:0001555;3.44e-10;54!UBERON:0005631;3.03e-08;10!UBERON:0000158;3.03e-08;10!UBERON:0001007;1.20e-07;81!UBERON:0002114;3.15e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.26e-48,17;UBERON:0000059,3.03e-41,11;UBERON:0005409,1.21e-33,25;UBERON:0001155,1.37e-32,9;UBERON:0001154,2.71e-19,1;UBERON:0001153,2.71e-19,1;UBERON:0001045,2.71e-19,1;UBERON:0004907,1.88e-15,5;UBERON:0002108,3.12e-15,4;UBERON:0000305,2.18e-11,7;UBERON:0004871,4.42e-10,8;UBERON:0004921,3.05e-09,118;UBERON:0001046,3.62e-09,19;UBERON:0001007,1.99e-07,145;UBERON:0001555,1.99e-07,145;UBERON:0007026,1.99e-07,145;UBERON:0002114,3.16e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,1.00928340350251,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,6.68484557265532,0,2.45728561679386,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,5.97157158647103,2.4768118060935,6.72133159426988,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556157009460346,1.49136876415977,0,0.280272163313789,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,2.00652811080656,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,1.00928340350251,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,6.68484557265532,0,2.45728561679386,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,5.97157158647103,2.4768118060935,6.72133159426988,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556157009460346,1.49136876415977,0,0.280272163313789,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,2.00652811080656,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p22@MUC3A,p22@MUC3B | |short_description=p22@MUC3A,p22@MUC3B | ||
}} | }} |
Latest revision as of 15:16, 24 September 2015
Short description: | p22@MUC3A, p22@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_MUC3A_5end, CAGE_peak_22_at_MUC3B_5end |
Coexpression cluster: | C1459_rectum_colon_amniotic_Intestinal_small_chorionic_pancreatic |
Association with transcript: | 189bp_to_ENST00000480291_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.51e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.26e-48 | 17 |
large intestine | 3.03e-41 | 11 |
gastrointestinal system | 1.21e-33 | 25 |
colon | 1.37e-32 | 9 |
vermiform appendix | 2.71e-19 | 1 |
caecum | 2.71e-19 | 1 |
midgut | 2.71e-19 | 1 |
lower digestive tract | 1.88e-15 | 5 |
small intestine | 3.12e-15 | 4 |
amnion | 2.18e-11 | 7 |
somatic layer of lateral plate mesoderm | 4.42e-10 | 8 |
subdivision of digestive tract | 3.05e-09 | 118 |
hindgut | 3.62e-09 | 19 |
digestive system | 1.99e-07 | 145 |
digestive tract | 1.99e-07 | 145 |
primitive gut | 1.99e-07 | 145 |
duodenum | 3.16e-07 | 2 |