FFCP PHASE1:Hg19::chr7:985418..985431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11033 | |EntrezGene=11033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16486 | |HGNC=16486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000463358_5end | |association_with_transcript=20bp_to_ENST00000463358_5end | ||
|cluster_id=chr7:985418..985431,- | |||
|description=CAGE_peak_8_at_ADAP1_5end | |description=CAGE_peak_8_at_ADAP1_5end | ||
|id=chr7:985418..985431,- | |id=chr7:985418..985431,- | ||
|ontology_enrichment_celltype=CL:0000066!1.69e-12!254;CL:0002076!2.03e-11!43;CL:0000223!2.40e-09!59;CL:0002231!6.27e-08!3;CL:0000068!1.72e-07!3;CL:0000069!1.72e-07!3;CL:0000307!1.72e-07!3;CL:0000377!1.72e-07!3;CL:0002251!2.39e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.69e-12!254;CL:0002076!2.03e-11!43;CL:0000223!2.40e-09!59;CL:0002231!6.27e-08!3;CL:0000068!1.72e-07!3;CL:0000069!1.72e-07!3;CL:0000307!1.72e-07!3;CL:0000377!1.72e-07!3;CL:0002251!2.39e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002231;5.80e-13;3!CL:0000167;7.39e-11;1!CL:0000164;7.39e-11;1!CL:0000502;7.39e-11;1!CL:0000172;7.39e-11;1!CL:0000173;7.39e-11;1!CL:0002563;5.96e-10;4!CL:0002076;3.78e-08;42 | |ontology_enrichment_celltype_v019=CL:0002231;5.80e-13;3!CL:0000167;7.39e-11;1!CL:0000164;7.39e-11;1!CL:0000502;7.39e-11;1!CL:0000172;7.39e-11;1!CL:0000173;7.39e-11;1!CL:0002563;5.96e-10;4!CL:0002076;3.78e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,5.81e-13,3;CL:0000167,7.40e-11,1;CL:0000164,7.40e-11,1;CL:0000502,7.40e-11,1;CL:0000172,7.40e-11,1;CL:0000173,7.40e-11,1;CL:0002351,7.40e-11,1;CL:0002563,7.83e-10,4;CL:0002076,1.02e-09,42;CL:0000223,7.17e-09,58;CL:0000066,1.08e-08,253 | |||
|ontology_enrichment_development_v019=CL:0002351;7.39e-11;1 | |ontology_enrichment_development_v019=CL:0002351;7.39e-11;1 | ||
|ontology_enrichment_disease=DOID:305!4.48e-20!106;DOID:0050687!2.60e-13!143;DOID:1749!3.34e-11!14;DOID:299!1.80e-09!25 | |ontology_enrichment_disease=DOID:305!4.48e-20!106;DOID:0050687!2.60e-13!143;DOID:1749!3.34e-11!14;DOID:299!1.80e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.94e-19;2!DOID:4430;7.39e-11;1!DOID:0050619;8.52e-11;1!DOID:1357;8.52e-11;1!DOID:3119;1.18e-10;14!DOID:299;7.04e-09;25 | |ontology_enrichment_disease_v019=DOID:3493;5.94e-19;2!DOID:4430;7.39e-11;1!DOID:0050619;8.52e-11;1!DOID:1357;8.52e-11;1!DOID:3119;1.18e-10;14!DOID:299;7.04e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,7.16e-19,2;DOID:305,2.48e-12,106;DOID:4430,7.40e-11,1;DOID:0050619,8.14e-11,1;DOID:1357,8.14e-11,1;DOID:3119,9.80e-11,14;DOID:0050687,3.77e-10,143;DOID:299,7.36e-09,25;DOID:162,3.06e-07,235;DOID:14566,4.93e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004921!9.00e-18!129;UBERON:0004185!9.00e-18!129;UBERON:0001007!5.96e-17!155;UBERON:0001555!5.96e-17!155;UBERON:0007026!5.96e-17!155;UBERON:0004119!1.64e-16!169;UBERON:0000925!1.64e-16!169;UBERON:0006595!1.64e-16!169;UBERON:0005409!2.33e-13!35;UBERON:0000077!3.71e-12!130;UBERON:0000160!1.10e-11!27;UBERON:0000344!9.18e-11!12;UBERON:0000059!2.37e-10!11;UBERON:0003343!7.27e-09!4;UBERON:0004785!7.27e-09!4;UBERON:0004907!2.31e-08!5;UBERON:0000466!2.40e-08!126;UBERON:0000464!5.81e-08!104;UBERON:0001041!6.65e-08!98;UBERON:0003729!4.32e-07!5;UBERON:0005178!4.87e-07!34;UBERON:0002224!4.87e-07!34;UBERON:0005156!7.02e-07!59;UBERON:0000990!7.02e-07!59;UBERON:0001046!8.55e-07!19;UBERON:0005181!9.15e-07!35 | |ontology_enrichment_uberon=UBERON:0004921!9.00e-18!129;UBERON:0004185!9.00e-18!129;UBERON:0001007!5.96e-17!155;UBERON:0001555!5.96e-17!155;UBERON:0007026!5.96e-17!155;UBERON:0004119!1.64e-16!169;UBERON:0000925!1.64e-16!169;UBERON:0006595!1.64e-16!169;UBERON:0005409!2.33e-13!35;UBERON:0000077!3.71e-12!130;UBERON:0000160!1.10e-11!27;UBERON:0000344!9.18e-11!12;UBERON:0000059!2.37e-10!11;UBERON:0003343!7.27e-09!4;UBERON:0004785!7.27e-09!4;UBERON:0004907!2.31e-08!5;UBERON:0000466!2.40e-08!126;UBERON:0000464!5.81e-08!104;UBERON:0001041!6.65e-08!98;UBERON:0003729!4.32e-07!5;UBERON:0005178!4.87e-07!34;UBERON:0002224!4.87e-07!34;UBERON:0005156!7.02e-07!59;UBERON:0000990!7.02e-07!59;UBERON:0001046!8.55e-07!19;UBERON:0005181!9.15e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.20e-13;22!UBERON:0000160;2.20e-12;17!UBERON:0001764;8.52e-11;1!UBERON:0001825;8.52e-11;1!UBERON:0001052;5.96e-10;4!UBERON:0001242;5.96e-10;4!UBERON:0001262;5.96e-10;4!UBERON:0004786;5.96e-10;4!UBERON:0004808;5.96e-10;4!UBERON:0001277;5.96e-10;4!UBERON:0004921;1.25e-08;33!UBERON:0004907;3.92e-08;5!UBERON:0000059;6.38e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0005409;1.20e-13;22!UBERON:0000160;2.20e-12;17!UBERON:0001764;8.52e-11;1!UBERON:0001825;8.52e-11;1!UBERON:0001052;5.96e-10;4!UBERON:0001242;5.96e-10;4!UBERON:0001262;5.96e-10;4!UBERON:0004786;5.96e-10;4!UBERON:0004808;5.96e-10;4!UBERON:0001277;5.96e-10;4!UBERON:0004921;1.25e-08;33!UBERON:0004907;3.92e-08;5!UBERON:0000059;6.38e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.88e-12,17;UBERON:0005409,4.21e-12,25;UBERON:0001764,8.14e-11,1;UBERON:0001825,8.14e-11,1;UBERON:0004921,1.02e-10,118;UBERON:0001052,4.76e-10,4;UBERON:0001242,7.83e-10,4;UBERON:0001262,7.83e-10,4;UBERON:0004786,7.83e-10,4;UBERON:0004808,7.83e-10,4;UBERON:0001277,7.83e-10,4;UBERON:0001007,2.46e-08,145;UBERON:0001555,2.46e-08,145;UBERON:0007026,2.46e-08,145;UBERON:0004907,3.27e-08,5;UBERON:0000059,5.74e-08,11;UBERON:0001046,8.01e-08,19;UBERON:0004119,2.33e-07,160;UBERON:0000925,2.33e-07,160;UBERON:0006595,2.33e-07,160 | |||
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| ||
|short_description=p8@ADAP1 | |short_description=p8@ADAP1 | ||
}} | }} |
Latest revision as of 07:40, 20 September 2015
Short description: | p8@ADAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ADAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000463358_5end |
EntrezGene: | ADAP1 |
HGNC: | 16486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 5.81e-13 | 3 |
peptide hormone secreting cell | 7.40e-11 | 1 |
enteroendocrine cell | 7.40e-11 | 1 |
type D enteroendocrine cell | 7.40e-11 | 1 |
somatostatin secreting cell | 7.40e-11 | 1 |
pancreatic D cell | 7.40e-11 | 1 |
progenitor cell of endocrine pancreas | 7.40e-11 | 1 |
intestinal epithelial cell | 7.83e-10 | 4 |
endo-epithelial cell | 1.02e-09 | 42 |
endodermal cell | 7.17e-09 | 58 |
epithelial cell | 1.08e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.88e-12 | 17 |
gastrointestinal system | 4.21e-12 | 25 |
maxillary sinus | 8.14e-11 | 1 |
paranasal sinus | 8.14e-11 | 1 |
subdivision of digestive tract | 1.02e-10 | 118 |
rectum | 4.76e-10 | 4 |
intestinal mucosa | 7.83e-10 | 4 |
wall of intestine | 7.83e-10 | 4 |
gastrointestinal system mucosa | 7.83e-10 | 4 |
gastrointestinal system epithelium | 7.83e-10 | 4 |
intestinal epithelium | 7.83e-10 | 4 |
digestive system | 2.46e-08 | 145 |
digestive tract | 2.46e-08 | 145 |
primitive gut | 2.46e-08 | 145 |
lower digestive tract | 3.27e-08 | 5 |
large intestine | 5.74e-08 | 11 |
hindgut | 8.01e-08 | 19 |
endoderm-derived structure | 2.33e-07 | 160 |
endoderm | 2.33e-07 | 160 |
presumptive endoderm | 2.33e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.16e-19 | 2 |
carcinoma | 2.48e-12 | 106 |
somatostatinoma | 7.40e-11 | 1 |
paranasal sinus cancer | 8.14e-11 | 1 |
maxillary sinus cancer | 8.14e-11 | 1 |
gastrointestinal system cancer | 9.80e-11 | 14 |
cell type cancer | 3.77e-10 | 143 |
adenocarcinoma | 7.36e-09 | 25 |
cancer | 3.06e-07 | 235 |
disease of cellular proliferation | 4.93e-07 | 239 |