FFCP PHASE1:Hg19::chr22:38382163..38382187,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:38382163..38382187,+ to FFCP PHASE1:Hg19::chr22:38382163..38382187,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5435 | |EntrezGene=5435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9193 | |HGNC=9193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000333418_5end | |||
|cluster_id=chr22:38382163..38382187,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_POLR2F_5end | |||
|id=chr22:38382163..38382187,+ | |||
|ontology_enrichment_celltype=CL:0000148!8.03e-10!10;CL:0000541!8.03e-10!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.54e-09;10!CL:0002567;9.19e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.64e-09,10;CL:0000541,6.64e-09,10;CL:0002567,9.07e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.16e-23;82!UBERON:0006241;3.10e-09;3!UBERON:0003057;3.10e-09;3!UBERON:0002532;1.23e-07;206!UBERON:0010316;1.23e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.98e-80!115;UBERON:0001049!1.87e-57!57;UBERON:0005068!1.87e-57!57;UBERON:0006241!1.87e-57!57;UBERON:0007135!1.87e-57!57;UBERON:0002616!7.10e-47!59;UBERON:0001017!6.39e-46!82;UBERON:0003080!2.29e-45!42;UBERON:0005743!5.09e-45!86;UBERON:0002780!3.61e-44!41;UBERON:0001890!3.61e-44!41;UBERON:0006240!3.61e-44!41;UBERON:0000955!9.93e-44!69;UBERON:0006238!9.93e-44!69;UBERON:0000073!1.05e-42!94;UBERON:0001016!1.05e-42!94;UBERON:0001893!2.74e-42!34;UBERON:0002020!3.47e-42!34;UBERON:0003528!3.47e-42!34;UBERON:0003075!1.11e-41!86;UBERON:0007284!1.11e-41!86;UBERON:0002791!1.12e-40!33;UBERON:0002346!4.44e-39!90;UBERON:0001869!8.17e-39!32;UBERON:0002619!1.10e-29!22;UBERON:0003056!1.66e-29!61;UBERON:0000153!6.07e-28!129;UBERON:0007811!6.07e-28!129;UBERON:0000956!9.71e-28!25;UBERON:0000203!9.71e-28!25;UBERON:0000033!1.28e-27!123;UBERON:0004121!2.98e-27!169;UBERON:0001950!1.43e-26!20;UBERON:0000924!3.60e-26!173;UBERON:0006601!3.60e-26!173;UBERON:0002308!3.39e-16!9;UBERON:0000125!3.39e-16!9;UBERON:0002420!5.59e-16!9;UBERON:0007245!5.59e-16!9;UBERON:0010009!5.59e-16!9;UBERON:0010011!5.59e-16!9;UBERON:0000454!5.59e-16!9;UBERON:0002298!5.20e-14!8;UBERON:0004111!7.03e-14!241;UBERON:0000025!1.27e-13!194;UBERON:0009663!5.69e-13!7;UBERON:0003076!7.02e-13!15;UBERON:0003057!7.02e-13!15;UBERON:0000477!4.68e-11!286;UBERON:0000200!7.25e-11!6;UBERON:0001871!2.24e-10!7;UBERON:0004732!4.34e-10!13;UBERON:0000349!1.86e-09!5;UBERON:0000064!2.81e-09!219;UBERON:0002021!1.03e-08!5;UBERON:0004733!1.32e-08!12;UBERON:0002028!1.32e-08!12;UBERON:0007277!1.32e-08!12;UBERON:0000475!2.24e-08!365;UBERON:0000062!2.58e-08!511;UBERON:0000483!5.98e-08!309;UBERON:0000481!6.38e-08!347;UBERON:0000369!8.88e-08!4;UBERON:0002435!8.88e-08!4;UBERON:0000204!8.88e-08!4;UBERON:0010082!8.88e-08!4;UBERON:0000119!1.02e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.50e-47;34!UBERON:0003528;1.73e-45;34!UBERON:0002020;1.73e-45;34!UBERON:0002791;3.68e-44;32!UBERON:0001869;5.18e-44;32!UBERON:0002780;2.08e-39;41!UBERON:0001890;2.08e-39;41!UBERON:0000073;5.09e-38;53!UBERON:0002616;5.09e-38;53!UBERON:0002619;5.33e-38;22!UBERON:0001950;2.73e-33;20!UBERON:0000956;5.57e-33;25!UBERON:0000203;5.57e-33;25!UBERON:0001017;5.16e-27;75!UBERON:0000955;3.45e-26;68!UBERON:0000125;3.25e-24;9!UBERON:0002308;3.25e-24;9!UBERON:0002420;6.98e-24;9!UBERON:0007245;6.98e-24;9!UBERON:0010009;6.98e-24;9!UBERON:0010011;6.98e-24;9!UBERON:0000454;6.98e-24;9!UBERON:0001016;9.39e-22;83!UBERON:0009663;3.24e-19;7!UBERON:0007023;2.08e-17;114!UBERON:0002298;1.92e-16;6!UBERON:0000200;5.84e-16;6!UBERON:0004732;1.55e-15;13!UBERON:0000349;8.92e-14;5!UBERON:0004733;3.33e-13;12!UBERON:0002028;3.33e-13;12!UBERON:0011216;6.69e-12;132!UBERON:0000369;3.51e-11;4!UBERON:0002435;3.51e-11;4!UBERON:0000204;3.51e-11;4!UBERON:0001871;1.37e-09;6!UBERON:0000988;2.59e-09;3!UBERON:0002240;3.10e-09;3!UBERON:0005174;3.10e-09;3!UBERON:0001137;3.10e-09;3!UBERON:0001872;4.14e-09;5!UBERON:0001896;7.84e-09;3!UBERON:0005290;7.84e-09;3!UBERON:0001870;8.27e-09;3!UBERON:0002021;8.47e-09;5!UBERON:0005383;1.33e-08;3!UBERON:0005382;1.33e-08;3!UBERON:0010314;1.38e-07;132!UBERON:0002680;2.76e-07;9!UBERON:0001895;2.76e-07;9!UBERON:0005162;3.68e-07;2!UBERON:0000122;3.68e-07;2!UBERON:0001875;4.62e-07;2!UBERON:0006514;4.62e-07;2!UBERON:0001897;4.89e-07;2!UBERON:0010225;4.89e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.86e-75,56;UBERON:0005068,2.86e-75,56;UBERON:0006241,2.86e-75,56;UBERON:0007135,2.86e-75,56;UBERON:0007023,4.46e-68,114;UBERON:0000073,6.42e-68,53;UBERON:0002616,6.42e-68,53;UBERON:0001017,2.57e-61,81;UBERON:0000955,9.45e-59,68;UBERON:0006238,9.45e-59,68;UBERON:0003075,1.79e-58,82;UBERON:0007284,1.79e-58,82;UBERON:0001016,6.80e-57,89;UBERON:0002780,1.65e-55,41;UBERON:0001890,1.65e-55,41;UBERON:0003080,1.65e-55,41;UBERON:0006240,1.65e-55,41;UBERON:0002346,3.46e-55,86;UBERON:0001893,1.08e-54,34;UBERON:0003528,1.51e-54,34;UBERON:0002020,1.51e-54,34;UBERON:0002791,1.21e-49,32;UBERON:0001869,1.76e-49,32;UBERON:0010371,7.28e-48,104;UBERON:0003056,6.09e-40,61;UBERON:0002619,5.22e-38,22;UBERON:0010314,9.17e-37,132;UBERON:0004121,1.34e-36,171;UBERON:0000924,1.34e-36,171;UBERON:0006601,1.34e-36,171;UBERON:0001950,2.65e-33,20;UBERON:0000956,5.47e-33,25;UBERON:0000203,5.47e-33,25;UBERON:0011216,1.87e-29,223;UBERON:0000125,3.17e-24,9;UBERON:0002308,3.17e-24,9;UBERON:0002420,6.90e-24,9;UBERON:0007245,6.90e-24,9;UBERON:0010009,6.90e-24,9;UBERON:0010011,6.90e-24,9;UBERON:0000454,6.90e-24,9;UBERON:0003076,6.38e-20,15;UBERON:0003057,6.38e-20,15;UBERON:0000025,8.36e-20,192;UBERON:0009663,3.19e-19,7;UBERON:0004111,7.46e-18,240;UBERON:0002298,1.87e-16,6;UBERON:0000200,5.84e-16,6;UBERON:0004732,1.52e-15,13;UBERON:0000349,8.80e-14,5;UBERON:0004733,3.28e-13,12;UBERON:0002028,3.28e-13,12;UBERON:0007277,3.28e-13,12;UBERON:0000483,2.94e-11,306;UBERON:0000369,3.46e-11,4;UBERON:0002435,3.46e-11,4;UBERON:0000204,3.46e-11,4;UBERON:0010082,3.46e-11,4;UBERON:0000119,5.03e-11,309;UBERON:0001871,1.36e-09,6;UBERON:0000988,2.56e-09,3;UBERON:0002240,2.93e-09,3;UBERON:0005174,2.93e-09,3;UBERON:0001137,2.93e-09,3;UBERON:0001872,4.09e-09,5;UBERON:0001896,7.74e-09,3;UBERON:0005290,7.74e-09,3;UBERON:0010096,7.74e-09,3;UBERON:0002021,8.30e-09,5;UBERON:0001870,8.38e-09,3;UBERON:0005383,1.35e-08,3;UBERON:0005382,1.35e-08,3;UBERON:0002680,2.75e-07,9;UBERON:0001895,2.75e-07,9;UBERON:0010092,2.75e-07,9;UBERON:0005162,3.68e-07,2;UBERON:0000122,3.68e-07,2;UBERON:0001875,4.62e-07,2;UBERON:0006514,4.62e-07,2;UBERON:0001897,4.89e-07,2;UBERON:0010225,4.89e-07,2;UBERON:0000923,5.14e-07,560;UBERON:0010316,5.14e-07,560;UBERON:0005291,5.14e-07,560;UBERON:0006598,5.14e-07,560;UBERON:0010317,5.14e-07,560;UBERON:0002532,5.14e-07,560;UBERON:0002050,7.47e-07,564 | |||
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| ||
|short_description=p3@POLR2F | |||
}} | }} |
Latest revision as of 07:06, 20 September 2015
Short description: | p3@POLR2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POLR2F_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -12bp_to_ENST00000333418_5end |
EntrezGene: | POLR2F |
HGNC: | 9193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.64e-09 | 10 |
melanoblast | 6.64e-09 | 10 |
light melanocyte | 9.07e-09 | 3 |