FFCP PHASE1:Hg19::chr16:10912729..10912750,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:10912729..10912750,- to FFCP PHASE1:Hg19::chr16:10912729..10912750,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=780776 | |EntrezGene=780776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20398 | |HGNC=20398 | ||
|TSSclassifier=strong | |||
|UniProt=A6NH52 | |UniProt=A6NH52 | ||
|association_with_transcript=-108bp_to_ENST00000299866,NM_001079512,uc002dad.3,uc002daf.1,uc010bun.2,uc010buo.1,uc010uyr.1,uc010uys.1,uc010uyt.1,uc010uyu.1_5end | |||
|cluster_id=chr16:10912729..10912750,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_FAM18A_5end | |||
|id=chr16:10912729..10912750,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-16;82!UBERON:0006215;6.80e-13;3!UBERON:0010122;9.38e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.76e-90!57;UBERON:0005068!9.76e-90!57;UBERON:0006241!9.76e-90!57;UBERON:0007135!9.76e-90!57;UBERON:0002616!8.34e-76!59;UBERON:0001017!4.03e-73!82;UBERON:0005743!1.19e-71!86;UBERON:0003075!1.28e-71!86;UBERON:0007284!1.28e-71!86;UBERON:0007023!2.97e-68!115;UBERON:0003080!3.93e-68!42;UBERON:0000955!1.04e-67!69;UBERON:0006238!1.04e-67!69;UBERON:0002346!1.10e-67!90;UBERON:0002780!2.33e-66!41;UBERON:0001890!2.33e-66!41;UBERON:0006240!2.33e-66!41;UBERON:0000073!1.24e-65!94;UBERON:0001016!1.24e-65!94;UBERON:0002020!4.67e-62!34;UBERON:0003528!4.67e-62!34;UBERON:0001893!2.57e-61!34;UBERON:0002791!2.92e-59!33;UBERON:0001869!2.31e-58!32;UBERON:0003056!1.26e-50!61;UBERON:0000956!1.63e-44!25;UBERON:0000203!1.63e-44!25;UBERON:0002619!2.59e-43!22;UBERON:0000153!2.76e-43!129;UBERON:0007811!2.76e-43!129;UBERON:0000033!3.17e-41!123;UBERON:0001950!3.64e-39!20;UBERON:0004121!4.24e-37!169;UBERON:0000924!7.88e-36!173;UBERON:0006601!7.88e-36!173;UBERON:0000025!2.66e-23!194;UBERON:0003076!1.59e-21!15;UBERON:0003057!1.59e-21!15;UBERON:0004111!7.09e-19!241;UBERON:0002420!9.92e-19!9;UBERON:0007245!9.92e-19!9;UBERON:0010009!9.92e-19!9;UBERON:0010011!9.92e-19!9;UBERON:0000454!9.92e-19!9;UBERON:0002308!1.20e-18!9;UBERON:0000125!1.20e-18!9;UBERON:0000477!6.70e-17!286;UBERON:0004733!1.95e-16!12;UBERON:0002028!1.95e-16!12;UBERON:0007277!1.95e-16!12;UBERON:0002298!4.23e-16!8;UBERON:0000483!1.29e-15!309;UBERON:0000119!2.72e-15!312;UBERON:0004732!5.56e-15!13;UBERON:0009663!1.20e-14!7;UBERON:0000200!3.28e-14!6;UBERON:0001871!8.75e-14!7;UBERON:0000064!2.02e-13!219;UBERON:0000475!2.37e-12!365;UBERON:0000349!8.67e-12!5;UBERON:0002021!1.12e-11!5;UBERON:0002680!2.64e-11!9;UBERON:0001895!2.64e-11!9;UBERON:0010092!2.64e-11!9;UBERON:0001872!4.73e-11!5;UBERON:0000369!1.10e-09!4;UBERON:0002435!1.10e-09!4;UBERON:0000204!1.10e-09!4;UBERON:0010082!1.10e-09!4;UBERON:0000481!2.34e-09!347;UBERON:0000062!5.48e-09!511;UBERON:0000922!3.62e-08!612;UBERON:0000923!4.67e-08!604;UBERON:0005291!4.67e-08!604;UBERON:0006598!4.67e-08!604;UBERON:0002532!4.67e-08!604;UBERON:0002771!4.88e-08!3;UBERON:0002050!5.24e-08!605;UBERON:0005423!5.24e-08!605;UBERON:0005383!9.46e-08!3;UBERON:0005382!9.46e-08!3;UBERON:0000988!1.28e-07!3;UBERON:0000467!1.80e-07!625;UBERON:0000480!2.01e-07!626;UBERON:0006331!3.55e-07!3;UBERON:0001894!3.77e-07!7;UBERON:0006222!3.77e-07!7;UBERON:0001896!5.60e-07!3;UBERON:0005290!5.60e-07!3;UBERON:0010096!5.60e-07!3;UBERON:0000468!6.10e-07!659;UBERON:0002240!7.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.71e-80;32!UBERON:0002619;3.23e-78;22!UBERON:0003528;5.84e-78;34!UBERON:0002020;5.84e-78;34!UBERON:0002791;9.47e-75;32!UBERON:0001893;1.40e-71;34!UBERON:0001950;4.46e-70;20!UBERON:0000956;1.38e-68;25!UBERON:0000203;1.38e-68;25!UBERON:0002780;2.81e-53;41!UBERON:0001890;2.81e-53;41!UBERON:0000073;2.94e-52;53!UBERON:0002616;2.94e-52;53!UBERON:0000955;3.87e-38;68!UBERON:0001017;1.38e-37;75!UBERON:0001016;4.88e-27;83!UBERON:0000200;1.26e-26;6!UBERON:0004733;3.23e-26;12!UBERON:0002028;3.23e-26;12!UBERON:0002298;2.54e-24;6!UBERON:0004732;4.43e-24;13!UBERON:0002420;1.18e-22;9!UBERON:0007245;1.18e-22;9!UBERON:0010009;1.18e-22;9!UBERON:0010011;1.18e-22;9!UBERON:0000454;1.18e-22;9!UBERON:0000125;1.66e-22;9!UBERON:0002308;1.66e-22;9!UBERON:0001871;5.09e-22;6!UBERON:0002021;1.08e-21;5!UBERON:0000349;1.08e-21;5!UBERON:0000369;8.78e-18;4!UBERON:0002435;8.78e-18;4!UBERON:0000204;8.78e-18;4!UBERON:0002680;3.17e-16;9!UBERON:0001895;3.17e-16;9!UBERON:0009663;3.30e-15;7!UBERON:0007023;1.63e-14;114!UBERON:0001870;3.28e-14;3!UBERON:0005383;7.19e-14;3!UBERON:0005382;7.19e-14;3!UBERON:0001872;1.05e-13;5!UBERON:0000988;1.73e-13;3!UBERON:0001896;1.34e-12;3!UBERON:0005290;1.34e-12;3!UBERON:0011216;3.16e-11;132!UBERON:0002702;2.73e-10;2!UBERON:0002771;2.92e-10;2!UBERON:0001876;9.38e-10;2!UBERON:0001873;9.38e-10;2!UBERON:0001954;9.38e-10;2!UBERON:0003022;9.38e-10;2!UBERON:0002421;9.38e-10;2!UBERON:0002600;9.38e-10;2!UBERON:0002148;1.48e-09;2!UBERON:0006331;1.48e-09;2!UBERON:0009662;1.48e-09;2!UBERON:0010314;1.08e-07;132 | |||
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|short_description=p4@FAM18A | |||
}} | }} |
Latest revision as of 04:50, 20 September 2015
Short description: | p4@FAM18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM18A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -108bp_to_ENST00000299866, NM_001079512, uc002dad.3, uc002daf.1, uc010bun.2, uc010buo.1, uc010uyr.1, uc010uys.1, uc010uyt.1, uc010uyu.1_5end |
EntrezGene: | FAM18A |
HGNC: | 20398 |
UniProt: | A6NH52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data