FFCP PHASE1:Hg19::chr2:216285472..216285532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=460bp_to_ENST00000496542_5end | |association_with_transcript=460bp_to_ENST00000496542_5end | ||
|cluster_id=chr2:216285472..216285532,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_30_at_FN1_5end | |description=CAGE_peak_30_at_FN1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.43e-35!180;CL:0000057!7.56e-24!75;CL:0002371!2.05e-14!591;CL:0000680!4.43e-14!57;CL:0000056!4.43e-14!57;CL:0000355!4.43e-14!57;CL:0000183!1.09e-13!59;CL:0000187!9.52e-13!54;CL:0000144!3.65e-12!625;CL:0000220!4.39e-12!246;CL:0002321!9.31e-12!248;CL:0000222!2.47e-11!119;CL:0000393!1.03e-09!60;CL:0000211!1.03e-09!60;CL:0002620!1.66e-09!23;CL:0000192!2.03e-08!42;CL:0000514!2.03e-08!42;CL:0002334!1.96e-07!12;CL:0002494!3.56e-07!16;CL:0000548!4.88e-07!679;CL:0000004!4.88e-07!679;CL:0000255!4.88e-07!679 | |ontology_enrichment_celltype=CL:0000055!4.43e-35!180;CL:0000057!7.56e-24!75;CL:0002371!2.05e-14!591;CL:0000680!4.43e-14!57;CL:0000056!4.43e-14!57;CL:0000355!4.43e-14!57;CL:0000183!1.09e-13!59;CL:0000187!9.52e-13!54;CL:0000144!3.65e-12!625;CL:0000220!4.39e-12!246;CL:0002321!9.31e-12!248;CL:0000222!2.47e-11!119;CL:0000393!1.03e-09!60;CL:0000211!1.03e-09!60;CL:0002620!1.66e-09!23;CL:0000192!2.03e-08!42;CL:0000514!2.03e-08!42;CL:0002334!1.96e-07!12;CL:0002494!3.56e-07!16;CL:0000548!4.88e-07!679;CL:0000004!4.88e-07!679;CL:0000255!4.88e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000134;2.31e-11;55!CL:0000057;5.64e-11;73!CL:0000723;2.70e-10;61!CL:0002620;3.89e-10;23!CL:0000048;2.71e-09;58!CL:0002320;5.85e-09;188!CL:0000187;6.78e-09;55!CL:0002334;2.56e-08;12!CL:0000349;3.05e-08;19!CL:0002494;4.60e-08;16!CL:0000034;8.02e-08;69!CL:0000192;2.24e-07;43!CL:0000359;2.93e-07;32!CL:0000499;3.94e-07;28 | |ontology_enrichment_celltype_v019=CL:0000134;2.31e-11;55!CL:0000057;5.64e-11;73!CL:0000723;2.70e-10;61!CL:0002620;3.89e-10;23!CL:0000048;2.71e-09;58!CL:0002320;5.85e-09;188!CL:0000187;6.78e-09;55!CL:0002334;2.56e-08;12!CL:0000349;3.05e-08;19!CL:0002494;4.60e-08;16!CL:0000034;8.02e-08;69!CL:0000192;2.24e-07;43!CL:0000359;2.93e-07;32!CL:0000499;3.94e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.19e-26,76;CL:0000680,6.64e-17,58;CL:0000056,6.64e-17,58;CL:0000355,6.64e-17,58;CL:0000048,1.76e-16,427;CL:0000723,8.80e-16,433;CL:0000187,2.39e-15,55;CL:0000034,1.45e-14,441;CL:0000393,4.33e-12,61;CL:0000211,4.33e-12,61;CL:0000192,2.79e-10,43;CL:0000514,2.79e-10,43;CL:0002620,4.60e-10,23;CL:0000222,2.17e-09,121;CL:0002334,2.46e-08,12;CL:0002321,2.96e-08,250;CL:0000349,3.27e-08,19;CL:0002494,4.89e-08,16;CL:0000359,1.06e-07,32;CL:0002320,1.21e-07,361;CL:0000499,4.55e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;3.25e-09;58!CL:0000514;2.24e-07;43 | |ontology_enrichment_development_v019=CL:0000355;3.25e-09;58!CL:0000514;2.24e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p30@FN1 | |short_description=p30@FN1 | ||
}} | }} |
Latest revision as of 04:23, 20 September 2015
Short description: | p30@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 460bp_to_ENST00000496542_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.19e-26 | 76 |
muscle precursor cell | 6.64e-17 | 58 |
myoblast | 6.64e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.64e-17 | 58 |
multi fate stem cell | 1.76e-16 | 427 |
somatic stem cell | 8.80e-16 | 433 |
muscle cell | 2.39e-15 | 55 |
stem cell | 1.45e-14 | 441 |
electrically responsive cell | 4.33e-12 | 61 |
electrically active cell | 4.33e-12 | 61 |
smooth muscle cell | 2.79e-10 | 43 |
smooth muscle myoblast | 2.79e-10 | 43 |
skin fibroblast | 4.60e-10 | 23 |
mesodermal cell | 2.17e-09 | 121 |
preadipocyte | 2.46e-08 | 12 |
embryonic cell | 2.96e-08 | 250 |
extraembryonic cell | 3.27e-08 | 19 |
cardiocyte | 4.89e-08 | 16 |
vascular associated smooth muscle cell | 1.06e-07 | 32 |
connective tissue cell | 1.21e-07 | 361 |
stromal cell | 4.55e-07 | 28 |