FFCP PHASE1:Hg19::chr2:216262492..216262555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU16 | |UniProt=B4DU16 | ||
|association_with_transcript=0bp_to_AK300458_5end | |association_with_transcript=0bp_to_AK300458_5end | ||
|cluster_id=chr2:216262492..216262555,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_6_at_FN1_5end | |description=CAGE_peak_6_at_FN1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!6.04e-34!180;CL:0000057!1.02e-24!75;CL:0000680!5.11e-14!57;CL:0000056!5.11e-14!57;CL:0000355!5.11e-14!57;CL:0000220!1.59e-13!246;CL:0000183!1.90e-13!59;CL:0002321!3.69e-13!248;CL:0000187!8.07e-13!54;CL:0000222!1.66e-12!119;CL:0002371!2.48e-12!591;CL:0000393!1.43e-10!60;CL:0000211!1.43e-10!60;CL:0000144!1.88e-10!625;CL:0002620!1.55e-09!23;CL:0000192!1.19e-08!42;CL:0000514!1.19e-08!42;CL:0002334!2.67e-08!12;CL:0000548!1.83e-07!679;CL:0000004!1.83e-07!679;CL:0000255!1.83e-07!679;CL:0002494!2.42e-07!16;CL:0000359!4.42e-07!32;CL:0000012!6.49e-07!682 | |ontology_enrichment_celltype=CL:0000055!6.04e-34!180;CL:0000057!1.02e-24!75;CL:0000680!5.11e-14!57;CL:0000056!5.11e-14!57;CL:0000355!5.11e-14!57;CL:0000220!1.59e-13!246;CL:0000183!1.90e-13!59;CL:0002321!3.69e-13!248;CL:0000187!8.07e-13!54;CL:0000222!1.66e-12!119;CL:0002371!2.48e-12!591;CL:0000393!1.43e-10!60;CL:0000211!1.43e-10!60;CL:0000144!1.88e-10!625;CL:0002620!1.55e-09!23;CL:0000192!1.19e-08!42;CL:0000514!1.19e-08!42;CL:0002334!2.67e-08!12;CL:0000548!1.83e-07!679;CL:0000004!1.83e-07!679;CL:0000255!1.83e-07!679;CL:0002494!2.42e-07!16;CL:0000359!4.42e-07!32;CL:0000012!6.49e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000134;2.76e-12;55!CL:0000723;8.13e-11;61!CL:0000057;1.45e-10;73!CL:0002620;2.16e-10;23!CL:0000048;5.32e-10;58!CL:0002320;5.43e-09;188!CL:0002334;5.66e-09;12!CL:0000187;1.82e-08;55!CL:0000034;2.43e-08;69!CL:0002494;6.10e-08;16!CL:0000349;9.91e-08;19!CL:0000359;2.77e-07;32!CL:0000192;3.31e-07;43!CL:0000499;4.40e-07;28 | |ontology_enrichment_celltype_v019=CL:0000134;2.76e-12;55!CL:0000723;8.13e-11;61!CL:0000057;1.45e-10;73!CL:0002620;2.16e-10;23!CL:0000048;5.32e-10;58!CL:0002320;5.43e-09;188!CL:0002334;5.66e-09;12!CL:0000187;1.82e-08;55!CL:0000034;2.43e-08;69!CL:0002494;6.10e-08;16!CL:0000349;9.91e-08;19!CL:0000359;2.77e-07;32!CL:0000192;3.31e-07;43!CL:0000499;4.40e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.40e-27,76;CL:0000680,8.67e-16,58;CL:0000056,8.67e-16,58;CL:0000355,8.67e-16,58;CL:0000187,1.85e-14,55;CL:0000048,1.84e-12,427;CL:0000723,5.80e-12,433;CL:0000222,1.27e-11,121;CL:0002321,1.36e-11,250;CL:0000034,2.83e-11,441;CL:0000393,4.16e-11,61;CL:0000211,4.16e-11,61;CL:0002620,2.37e-10,23;CL:0000192,7.84e-10,43;CL:0000514,7.84e-10,43;CL:0002334,5.45e-09,12;CL:0002494,6.18e-08,16;CL:0000349,8.37e-08,19;CL:0000359,1.20e-07,32;CL:0000499,4.84e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.18e-08;58!CL:0000514;3.31e-07;43 | |ontology_enrichment_development_v019=CL:0000355;1.18e-08;58!CL:0000514;3.31e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=38.1524596468169,187.980259976283,37.3529170854324,59.0432460283469,25.0298212879281,64.5530507834273,17.7309914717817,11.370957721683,2.61185628199839,1.96587149201207,4.18680700783456,13.7618064442009,28.486833648673,10.0250745897638,21.5408294223145,32.2716070296852,22.2996975368871,16.7971320789096,19.0293791528298,2.83178433576612,7.54802557603736,4.38836610069323,0.286235987131057,1.77936752594749,7.53255837568817,0.0764134057479513,0,0.0787107813136792,0,0,0.309632246632152,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,302.320514229312,61.7044790927345,16.4942704778154,12.2889311810753,15.5414752297126,20.568205692437,155.080759674964,437.48474840207,1.98523116044542,10.4212816807405,8.0808002837676,0.523916301990851,0,0,0,0,0.398873881556595,0,0,0,1.19257444420023,4.30117297553062,4.16568601929113,6.21838736116411,13.8434813949269,27.2366861520667,4.38889429727302,2.58416759169329,2.13459757612026,6.35969164252873,0.805658634218294,0,5.12530320851156,0.367663080345869,56.7099363517232,0.982297011124877,0.44905874525234,0.675668882899933,0,2.84779697870439,2.74802615895611,0,0,1.3082821564276,79.0185403195556,40.6483942443301,71.3685484583249,142.270963891412,40.0775271884143,27.473202406973,29.8897188043174,87.8136472365089,28.3202042213787,28.2892411346345,21.9038950172035,54.3373165245304,81.2408053516798,2.34321431833797,44.9510510635662,5.70471821544449,46.6279883321619,13.3875328453892,8.09364721840658,8.00569598202816,6.94124182266637,15.1086210293475,14.1556320210799,2.37600571456411,22.0067567057916,22.7540340484507,17.965453545406,4.37673896280572,23.6474002558012,3.04770527032601,12.7303510055443,30.0358039883039,10.9673783001816,14.5193194444827,61.8894243126574,23.9184275476796,51.287520080614,45.0136644126603,31.3279688884854,65.4406971715898,19.7283867711485,42.8691883892816,45.113333389635,84.5653143717784,26.5103708089822,35.5621325001386,76.3270623910721,19.3444028597069,7.46066606166146,2.12586938479627,9.00062197949754,0.573609190778008,0.487894824518382,0,3.02104251460748,1.7622379352613,2.52320850875628,0,14.0804579096834,77.8321535213391,6.90674606762403,134.666699129274,68.5785507586106,0.946454400318751,1.01150814046861,0.482022059766964,1.10293972732394,0.653638332277218,0.71181185733329,0.674156540800822,1.37355025587742,1.15424147083917,2.21446636387394,15.426595118379,17.6976824872502,29.4017422771084,10.1404027857465,9.82827216677626,1.77236972004421,0,7.50229475112993,3.94605963686609,15.4747902426162,1.1240175325762,0.301586917234893,0.925884451585296,2.6064664424826,6.23960871167747,10.1031939417691,0.115930404975077,36.5141039073405,3.89789408954899,8.33373922637899,5.13686211033415,0.790204397959275,0,0,0,0.148631162288728,1.87467667973554,16.798212819886,2.26840155587818,18.1803801086782,7.84711633987697,12.651628412452,0,0,0,0,0,0.126995788584338,1.14596527667483,0,8.55362230113526,11.8251616608822,2.40274446275134,1.14330573052231,5.15802987988659,22.6699235793306,12.7608617328453,14.4784321648711,64.3781602533388,32.121504597128,6.91439103120663,14.5610411675913,13.8891982101557,14.1849132023278,16.5181750989982,11.58121748631,30.3868099019208,9.87888404136923,11.7265026345745,6.39705507736582,7.91951872933429,7.23454504943007,6.10073421020206,3.69900067373611,1.2162378064119,0,6.32501818449095,33.5474797688216,44.7961549753044,17.1164286048862,21.2828520801341,68.0126627641769,17.7270353607497,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0,0,0,20.1214046419389,50.5172226270274,14.6483112797857,81.3166068585456,239.808560943385,58.9807032226916,59.3906974013056,10.5331134904702,0,20.694614258501,25.2405727443466,23.0461460677129,15.3783997608507,12.9228763925409,22.9906093953273,0,0,0.106727557803444,0.909382714338778,33.2870879020994,28.1222972796603,89.0707030069409,106.502609461915,195.339425725419,45.4893979857738,60.8931626389377,99.8902850301803,48.977961926847,88.0537351613163,53.6236410445644,11.9084376220023,45.175135338975,37.5359522425668,5.80125358039787,101.456273973462,0.552485933615378,7.00368133804101,23.4897606728665,16.1283030400092,2.25599806453706,2.84956747286335,0.784349769176855,1.46139224653261,4.3276167846079,3.4120015221269,1.36074964221213,12.5231231339241,24.6763604304463,5.41892875087706,4.51520796469368,1.01950509218015,0.831076008928724,2.46262230194396,0,0,0,3.28014645699706,2.92840555197873,4.94596855909067,0.0915694648183434,0.247528499761764,13.208107373912,16.9015663969496,17.6752322828576,12.2771812230995,12.7860352205155,23.3325585583717,13.2323109585149,42.7532574575729,61.4870782196329,18.8350846589583,11.3070685271356,26.1150166270345,21.9096676796221,16.5896526242959,18.0060849922879,11.1562931831349,169.369042594884,4.8792608911242,6.46870518369786,5.32306030317022,2.60979897622522,8.71023829788424,1.57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| ||
|short_description=p6@FN1 | |short_description=p6@FN1 | ||
}} | }} |
Latest revision as of 03:24, 20 September 2015
Short description: | p6@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_AK300458_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DU16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.40e-27 | 76 |
muscle precursor cell | 8.67e-16 | 58 |
myoblast | 8.67e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.67e-16 | 58 |
muscle cell | 1.85e-14 | 55 |
multi fate stem cell | 1.84e-12 | 427 |
somatic stem cell | 5.80e-12 | 433 |
mesodermal cell | 1.27e-11 | 121 |
embryonic cell | 1.36e-11 | 250 |
stem cell | 2.83e-11 | 441 |
electrically responsive cell | 4.16e-11 | 61 |
electrically active cell | 4.16e-11 | 61 |
skin fibroblast | 2.37e-10 | 23 |
smooth muscle cell | 7.84e-10 | 43 |
smooth muscle myoblast | 7.84e-10 | 43 |
preadipocyte | 5.45e-09 | 12 |
cardiocyte | 6.18e-08 | 16 |
extraembryonic cell | 8.37e-08 | 19 |
vascular associated smooth muscle cell | 1.20e-07 | 32 |
stromal cell | 4.84e-07 | 28 |