FFCP PHASE1:Hg19::chr3:124653579..124653601,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56667 | |EntrezGene=56667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7511 | |HGNC=7511 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3R2,C9IZG1 | |UniProt=Q9H3R2,C9IZG1 | ||
|association_with_transcript=0bp_to_ENST00000311075,ENST00000478191,NM_033049,uc003ehq.1_5end | |association_with_transcript=0bp_to_ENST00000311075,ENST00000478191,NM_033049,uc003ehq.1_5end | ||
|cluster_id=chr3:124653579..124653601,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_MUC13_5end | |description=CAGE_peak_1_at_MUC13_5end | ||
|id=chr3:124653579..124653601,- | |id=chr3:124653579..124653601,- | ||
|ontology_enrichment_celltype=CL:0000181!8.55e-07!12;CL:0000417!8.55e-07!12;CL:0000668!8.55e-07!12;CL:0000414!8.55e-07!12;CL:0000412!8.55e-07!12;CL:0000182!8.55e-07!12 | |ontology_enrichment_celltype=CL:0000181!8.55e-07!12;CL:0000417!8.55e-07!12;CL:0000668!8.55e-07!12;CL:0000414!8.55e-07!12;CL:0000412!8.55e-07!12;CL:0000182!8.55e-07!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.45e-13;29!UBERON:0006595;1.42e-08;86!UBERON:0009497;4.44e-08;13!UBERON:0004161;4.11e-07;11 | |||
|ontology_enrichment_disease=DOID:305!2.05e-12!106;DOID:0050687!2.85e-11!143 | |ontology_enrichment_disease=DOID:305!2.05e-12!106;DOID:0050687!2.85e-11!143 | ||
|ontology_enrichment_disease_v019=DOID:3119;2.51e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.22e-12,106;DOID:0050687,1.05e-10,143;DOID:3119,2.51e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.89e-22!129;UBERON:0004185!6.89e-22!129;UBERON:0001007!1.36e-20!155;UBERON:0001555!1.36e-20!155;UBERON:0007026!1.36e-20!155;UBERON:0000077!1.27e-18!130;UBERON:0004119!5.80e-18!169;UBERON:0000925!5.80e-18!169;UBERON:0006595!5.80e-18!169;UBERON:0001041!6.98e-13!98;UBERON:0009497!2.35e-12!25;UBERON:0000015!2.35e-12!25;UBERON:0002423!2.35e-12!25;UBERON:0006235!2.35e-12!25;UBERON:0004161!2.35e-12!25;UBERON:0001737!1.68e-11!9;UBERON:0009854!9.97e-11!23;UBERON:0005409!3.55e-10!35;UBERON:0008835!1.19e-09!22;UBERON:0003894!1.19e-09!22;UBERON:0009856!5.72e-09!26;UBERON:0003929!1.10e-08!54;UBERON:0003104!4.97e-08!238;UBERON:0009142!4.97e-08!238;UBERON:0007499!5.25e-08!25;UBERON:0000160!8.49e-08!27;UBERON:0005057!9.51e-08!26;UBERON:0005911!1.43e-07!82;UBERON:0001557!3.35e-07!19;UBERON:0002107!4.87e-07!19;UBERON:0006925!4.87e-07!19;UBERON:0008836!4.87e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.78e-21;22!UBERON:0000160;4.16e-18;17!UBERON:0001737;4.61e-18;9!UBERON:0001557;4.61e-18;9!UBERON:0004921;5.01e-12;33!UBERON:0000059;1.17e-10;11!UBERON:0002423;1.19e-08;25!UBERON:0002108;1.31e-08;4!UBERON:0004907;2.36e-08;5!UBERON:0001155;6.01e-07;9!UBERON:0000065;6.24e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.73e-20,118;UBERON:0005409,1.75e-18,25;UBERON:0001737,3.72e-18,9;UBERON:0000160,4.23e-18,17;UBERON:0001007,9.60e-17,145;UBERON:0001555,9.60e-17,145;UBERON:0007026,9.60e-17,145;UBERON:0004119,3.87e-14,160;UBERON:0000925,3.87e-14,160;UBERON:0006595,3.87e-14,160;UBERON:0001041,1.48e-11,87;UBERON:0000059,1.19e-10,11;UBERON:0008947,1.66e-09,38;UBERON:0003258,1.66e-09,38;UBERON:0009497,1.13e-08,25;UBERON:0000015,1.13e-08,25;UBERON:0002423,1.13e-08,25;UBERON:0006235,1.13e-08,25;UBERON:0004161,1.13e-08,25;UBERON:0002108,1.31e-08,4;UBERON:0004907,2.40e-08,5;UBERON:0009854,4.90e-08,23;UBERON:0001557,1.13e-07,19;UBERON:0011216,4.46e-07,223;UBERON:0001155,6.09e-07,9;UBERON:0009856,7.15e-07,26;UBERON:0008835,9.85e-07,22;UBERON:0003894,9.85e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.5490155510556,46.879436575919,48.9581059771085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0.257640540045629,0,1.85653965465393,0.779496041289589,0,0,0,0,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,3.66751080123516,3.87744787179634,3.61516544825223,5.5146986366197,3.4860711054785,4.27087114399974,5.79774625088707,4.70931516300831,5.00171304030308,0,0,0,0,2.53510069643662,2.94848165003288,0.590789906681404,0,62.847092095531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.482561763430822,0,0,0.177561725313127,0,0,0,52.0904227739892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,3.46293581513704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.7052486280395,0,0,0,0,0,0,0,0,0,0,419.194810514412,0,0,4.23484860254418,0,0,0,0,0,0,0,2.63686198762815,0,10.3608953890556,144.772771738321,27.4606695161161,0,173.057236478264,0,0.359473404589307,399.217219526608,0,0.394573622547734,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01116932187355,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,5.37141671448975,0,193.08081462923,656.44358617928,1246.5014956646,0.593042257361244,0.741383633679017,0.313265848516366,0.067401132980677,0,0,0,0,0,0,665.448938267651,0,0.189559738885464,0,0,0,0,0,0,4.55375273647668,0,0,0,0,1.92199335066233,0,4.45079123929792,4.45844834225732,4.02365739560725,0.775912131907355,0,0,0.822251547880505,0.596143835108969,0,0.586654148204409,1.52301758477914,138.744446580579,0,10.2304196179415,0,0.514784993585894,39.3269598507649,0.372757606696298,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0,1.59743200399193,0,0,0,2.88239906833923,29.1239873818635,0.236349546921671,0.247247575143499,0.471824806979294,96.754214328998,10.6688398402888,0,0,0,0,0,0,0,0,0,24.3509635554522,1.10154635083496,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,1.13312091520126,52.6122518904316,1.32506888912221,0.258565912723101,0,101.454494865407,0,1.38823636338003,0.314408610199332,2.07119527673598,0,0,0,1.91502377331055,0,0,0,0.327872630709804,0,0,0,0,0,0.776503360757966,0.248385611765534,0,0,3.1846314683746,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0.887130899937803,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,138.633058626957,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,2.40673050717623,0.40341013740704,14.8487662134288,0,0.163771917510097,5.47067519003067,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0.638812138197976,0,0,0,0,0.532214220975833,5.76169937778896,0.171488009437418,0,0,0,0.556157009460346,1.0989032999072,0,1259.82337409548,57.5289993920982,20.2971935745504,0,0.428859265059938,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,66.64400862475,383.675709919202,0,0,0,6.79995390282795,0,0,0,0,0,0,2467.72087965964,2235.64574439498,13.6392015944842,0.245148321753905,4.24217784782927,0,0,5.0718687310008,9.0061370784543,0.0939839179798536,0,0.199882311849858,0,0,0,70.8426296599122,0,0,0,0,0,779.256536079185,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,22.816036063405,7.85612623830343,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.336760265072938,130.032358376922,16.3003574707547,0.651226148887796,0,0,5.4793373285018,11.7320471201727,0.977931553462932,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.5490155510556,46.879436575919,48.9581059771085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0.257640540045629,0,1.85653965465393,0.779496041289589,0,0,0,0,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,3.66751080123516,3.87744787179634,3.61516544825223,5.5146986366197,3.4860711054785,4.27087114399974,5.79774625088707,4.70931516300831,5.00171304030308,0,0,0,0,2.53510069643662,2.94848165003288,0.590789906681404,0,62.847092095531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.482561763430822,0,0,0.177561725313127,0,0,0,52.0904227739892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,3.46293581513704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.7052486280395,0,0,0,0,0,0,0,0,0,0,419.194810514412,0,0,4.23484860254418,0,0,0,0,0,0,0,2.63686198762815,0,10.3608953890556,144.772771738321,27.4606695161161,0,173.057236478264,0,0.359473404589307,399.217219526608,0,0.394573622547734,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01116932187355,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,5.37141671448975,0,193.08081462923,656.44358617928,1246.5014956646,0.593042257361244,0.741383633679017,0.313265848516366,0.067401132980677,0,0,0,0,0,0,665.448938267651,0,0.189559738885464,0,0,0,0,0,0,4.55375273647668,0,0,0,0,1.92199335066233,0,4.45079123929792,4.45844834225732,4.02365739560725,0.775912131907355,0,0,0.822251547880505,0.596143835108969,0,0.586654148204409,1.52301758477914,138.744446580579,0,10.2304196179415,0,0.514784993585894,39.3269598507649,0.372757606696298,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0,1.59743200399193,0,0,0,2.88239906833923,29.1239873818635,0.236349546921671,0.247247575143499,0.471824806979294,96.754214328998,10.6688398402888,0,0,0,0,0,0,0,0,0,24.3509635554522,1.10154635083496,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,1.13312091520126,52.6122518904316,1.32506888912221,0.258565912723101,0,101.454494865407,0,1.38823636338003,0.314408610199332,2.07119527673598,0,0,0,1.91502377331055,0,0,0,0.327872630709804,0,0,0,0,0,0.776503360757966,0.248385611765534,0,0,3.1846314683746,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0.887130899937803,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,138.633058626957,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,2.40673050717623,0.40341013740704,14.8487662134288,0,0.163771917510097,5.47067519003067,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0.638812138197976,0,0,0,0,0.532214220975833,5.76169937778896,0.171488009437418,0,0,0,0.556157009460346,1.0989032999072,0,1259.82337409548,57.5289993920982,20.2971935745504,0,0.428859265059938,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,66.64400862475,383.675709919202,0,0,0,6.79995390282795,0,0,0,0,0,0,2467.72087965964,2235.64574439498,13.6392015944842,0.245148321753905,4.24217784782927,0,0,5.0718687310008,9.0061370784543,0.0939839179798536,0,0.199882311849858,0,0,0,70.8426296599122,0,0,0,0,0,779.256536079185,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,22.816036063405,7.85612623830343,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.336760265072938,130.032358376922,16.3003574707547,0.651226148887796,0,0,5.4793373285018,11.7320471201727,0.977931553462932,0,0.665756774185513,0,0 | ||
|short_description=p1@MUC13 | |short_description=p1@MUC13 | ||
}} | }} |
Latest revision as of 02:54, 20 September 2015
Short description: | p1@MUC13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MUC13_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000311075, ENST00000478191, NM_033049, uc003ehq.1_5end |
EntrezGene: | MUC13 |
HGNC: | 7511 |
UniProt: | Q9H3R2C9IZG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.73e-20 | 118 |
gastrointestinal system | 1.75e-18 | 25 |
larynx | 3.72e-18 | 9 |
intestine | 4.23e-18 | 17 |
digestive system | 9.60e-17 | 145 |
digestive tract | 9.60e-17 | 145 |
primitive gut | 9.60e-17 | 145 |
endoderm-derived structure | 3.87e-14 | 160 |
endoderm | 3.87e-14 | 160 |
presumptive endoderm | 3.87e-14 | 160 |
foregut | 1.48e-11 | 87 |
large intestine | 1.19e-10 | 11 |
respiratory primordium | 1.66e-09 | 38 |
endoderm of foregut | 1.66e-09 | 38 |
epithelium of foregut-midgut junction | 1.13e-08 | 25 |
anatomical boundary | 1.13e-08 | 25 |
hepatobiliary system | 1.13e-08 | 25 |
foregut-midgut junction | 1.13e-08 | 25 |
septum transversum | 1.13e-08 | 25 |
small intestine | 1.31e-08 | 4 |
lower digestive tract | 2.40e-08 | 5 |
digestive tract diverticulum | 4.90e-08 | 23 |
upper respiratory tract | 1.13e-07 | 19 |
organ system subdivision | 4.46e-07 | 223 |
colon | 6.09e-07 | 9 |
sac | 7.15e-07 | 26 |
hepatic diverticulum | 9.85e-07 | 22 |
liver primordium | 9.85e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.22e-12 | 106 |
cell type cancer | 1.05e-10 | 143 |
gastrointestinal system cancer | 2.51e-07 | 14 |