FFCP PHASE1:Hg19::chr1:205313388..205313421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-78bp_to_ENST00000539253_5end | |association_with_transcript=-78bp_to_ENST00000539253_5end | ||
|cluster_id=chr1:205313388..205313421,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_3_at_KLHDC8A_5end | |description=CAGE_peak_3_at_KLHDC8A_5end | ||
|id=chr1:205313388..205313421,- | |id=chr1:205313388..205313421,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.46e-14;2!CL:0000764;3.52e-14;2!CL:0000558;3.52e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.21e-14,2;CL:0000765,2.21e-14,2;CL:0000050,2.21e-14,2;CL:0000038,2.21e-14,2;CL:0000558,2.21e-14,2;CL:0000547,2.21e-14,2;CL:0000549,2.21e-14,2;CL:0000550,2.21e-14,2;CL:0000552,2.21e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.28e-21;3!UBERON:0006222;6.18e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004733;1.48e-26;12!UBERON:0002028;1.48e-26;12!UBERON:0002680;2.01e-26;9!UBERON:0001895;2.01e-26;9!UBERON:0004732;1.87e-24;13!UBERON:0000988;7.08e-21;3!UBERON:0002298;3.95e-18;6!UBERON:0001905;2.79e-15;2!UBERON:0002757;2.79e-15;2!UBERON:0010134;2.79e-15;2!UBERON:0005408;2.79e-15;2!UBERON:0001899;2.79e-15;2!UBERON:0002148;3.52e-14;2!UBERON:0006331;3.52e-14;2!UBERON:0009662;3.52e-14;2!UBERON:0000178;4.14e-11;15!UBERON:0000179;4.14e-11;15!UBERON:0000463;4.14e-11;15!UBERON:0002037;1.17e-10;6!UBERON:0001894;1.68e-09;7!UBERON:0000073;4.24e-09;53!UBERON:0002616;4.24e-09;53!UBERON:0007023;8.13e-09;114!UBERON:0001016;4.22e-08;83!UBERON:0003296;4.55e-08;4!UBERON:0010133;4.55e-08;4!UBERON:0002784;4.55e-08;4!UBERON:0000955;5.77e-08;68!UBERON:0002372;6.18e-08;1!UBERON:0001961;6.18e-08;1!UBERON:0001744;6.18e-08;1!UBERON:0001042;6.18e-08;1!UBERON:0001735;6.18e-08;1!UBERON:0000125;3.89e-07;9!UBERON:0002308;3.89e-07;9!UBERON:0001017;5.60e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.36e-27,15;UBERON:0003057,2.36e-27,15;UBERON:0004733,1.38e-26,12;UBERON:0002028,1.38e-26,12;UBERON:0007277,1.38e-26,12;UBERON:0002680,2.32e-26,9;UBERON:0001895,2.32e-26,9;UBERON:0010092,2.32e-26,9;UBERON:0004732,1.75e-24,13;UBERON:0007023,2.54e-24,114;UBERON:0000988,1.96e-20,3;UBERON:0002298,6.18e-18,6;UBERON:0001016,1.02e-17,89;UBERON:0001049,2.29e-17,56;UBERON:0005068,2.29e-17,56;UBERON:0006241,2.29e-17,56;UBERON:0007135,2.29e-17,56;UBERON:0000073,1.11e-15,53;UBERON:0002616,1.11e-15,53;UBERON:0001905,2.80e-15,2;UBERON:0002757,2.80e-15,2;UBERON:0010134,2.80e-15,2;UBERON:0005408,2.80e-15,2;UBERON:0001899,2.80e-15,2;UBERON:0001017,3.45e-15,81;UBERON:0002148,9.59e-14,2;UBERON:0006331,9.59e-14,2;UBERON:0009662,9.59e-14,2;UBERON:0000955,1.38e-11,68;UBERON:0006238,1.38e-11,68;UBERON:0000178,3.34e-11,15;UBERON:0000179,3.34e-11,15;UBERON:0000463,3.34e-11,15;UBERON:0003075,3.75e-11,82;UBERON:0007284,3.75e-11,82;UBERON:0002037,7.90e-11,6;UBERON:0006215,7.90e-11,6;UBERON:0002346,1.58e-10,86;UBERON:0004121,3.57e-10,171;UBERON:0000924,3.57e-10,171;UBERON:0006601,3.57e-10,171;UBERON:0001894,2.06e-09,7;UBERON:0006222,2.06e-09,7;UBERON:0010371,2.63e-08,104;UBERON:0003296,4.56e-08,4;UBERON:0010133,4.56e-08,4;UBERON:0002784,4.56e-08,4;UBERON:0002372,6.19e-08,1;UBERON:0001961,6.19e-08,1;UBERON:0001744,6.19e-08,1;UBERON:0001735,6.19e-08,1;UBERON:0011216,6.94e-08,223;UBERON:0010314,3.50e-07,132;UBERON:0000125,5.96e-07,9;UBERON:0002308,5.96e-07,9 | |||
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| ||
|short_description=p3@KLHDC8A | |short_description=p3@KLHDC8A | ||
}} | }} |
Latest revision as of 02:45, 20 September 2015
Short description: | p3@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLHDC8A_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -78bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.21e-14 | 2 |
erythroblast | 2.21e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 2.21e-14 | 2 |
erythroid progenitor cell | 2.21e-14 | 2 |
reticulocyte | 2.21e-14 | 2 |
proerythroblast | 2.21e-14 | 2 |
basophilic erythroblast | 2.21e-14 | 2 |
polychromatophilic erythroblast | 2.21e-14 | 2 |
orthochromatic erythroblast | 2.21e-14 | 2 |