FFCP PHASE1:Hg19::chr6:118228389..118228435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222553 | |EntrezGene=222553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21483 | |HGNC=21483 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T1Q4 | |UniProt=Q5T1Q4 | ||
|association_with_transcript=-253bp_to_ENST00000360388,NM_001029858,uc003pxx.3_5end | |association_with_transcript=-253bp_to_ENST00000360388,NM_001029858,uc003pxx.3_5end | ||
|cluster_id=chr6:118228389..118228435,+ | |||
|coexpression_cluster_id=C1198 | |||
|description=CAGE_peak_1_at_SLC35F1_5end | |description=CAGE_peak_1_at_SLC35F1_5end | ||
|id=chr6:118228389..118228435,+ | |id=chr6:118228389..118228435,+ | ||
|ontology_enrichment_celltype=CL:0000047!3.66e-09!8;CL:0000540!7.13e-07!6;CL:0000031!7.13e-07!6;CL:0000404!7.13e-07!6 | |ontology_enrichment_celltype=CL:0000047!3.66e-09!8;CL:0000540!7.13e-07!6;CL:0000031!7.13e-07!6;CL:0000404!7.13e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.52e-09;25!CL:0000540;1.03e-08;6!CL:0000404;1.03e-08;6!CL:0002322;6.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.87e-12,8;CL:0002319,3.50e-09,25;CL:0000540,1.04e-08,6;CL:0000031,1.04e-08,6;CL:0000404,1.04e-08,6;CL:0002322,6.96e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.28e-16;82!CL:0000031;1.03e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.80e-62!86;UBERON:0000073!7.68e-61!94;UBERON:0001016!7.68e-61!94;UBERON:0007023!1.77e-60!115;UBERON:0001017!1.36e-59!82;UBERON:0001049!2.12e-56!57;UBERON:0005068!2.12e-56!57;UBERON:0006241!2.12e-56!57;UBERON:0007135!2.12e-56!57;UBERON:0002346!3.01e-51!90;UBERON:0003075!1.74e-50!86;UBERON:0007284!1.74e-50!86;UBERON:0002616!2.34e-48!59;UBERON:0000955!1.01e-46!69;UBERON:0006238!1.01e-46!69;UBERON:0003080!1.57e-44!42;UBERON:0002780!8.59e-44!41;UBERON:0001890!8.59e-44!41;UBERON:0006240!8.59e-44!41;UBERON:0001893!2.71e-38!34;UBERON:0003056!2.74e-38!61;UBERON:0002020!3.68e-38!34;UBERON:0003528!3.68e-38!34;UBERON:0002791!3.71e-37!33;UBERON:0001869!1.58e-36!32;UBERON:0000924!4.38e-36!173;UBERON:0006601!4.38e-36!173;UBERON:0004121!5.75e-35!169;UBERON:0000153!5.38e-31!129;UBERON:0007811!5.38e-31!129;UBERON:0000033!9.19e-31!123;UBERON:0000956!4.22e-29!25;UBERON:0000203!4.22e-29!25;UBERON:0002619!1.34e-25!22;UBERON:0001950!1.18e-23!20;UBERON:0003076!1.12e-12!15;UBERON:0003057!1.12e-12!15;UBERON:0000025!5.97e-11!194;UBERON:0004732!1.12e-10!13;UBERON:0000064!1.74e-10!219;UBERON:0002420!1.90e-10!9;UBERON:0007245!1.90e-10!9;UBERON:0010009!1.90e-10!9;UBERON:0010011!1.90e-10!9;UBERON:0000454!1.90e-10!9;UBERON:0002308!2.15e-10!9;UBERON:0000125!2.15e-10!9;UBERON:0004733!7.53e-10!12;UBERON:0002028!7.53e-10!12;UBERON:0007277!7.53e-10!12;UBERON:0004111!1.03e-09!241;UBERON:0001871!1.14e-09!7;UBERON:0000922!2.26e-09!612;UBERON:0002298!1.45e-08!8;UBERON:0009663!1.55e-08!7;UBERON:0000477!2.46e-08!286;UBERON:0000200!4.23e-08!6;UBERON:0000481!4.38e-08!347;UBERON:0000468!2.17e-07!659;UBERON:0002680!3.20e-07!9;UBERON:0001895!3.20e-07!9;UBERON:0010092!3.20e-07!9;UBERON:0000062!4.18e-07!511;UBERON:0001872!4.56e-07!5;UBERON:0002050!5.41e-07!605;UBERON:0005423!5.41e-07!605;UBERON:0000475!5.96e-07!365;UBERON:0002021!6.03e-07!5;UBERON:0001894!6.48e-07!7;UBERON:0006222!6.48e-07!7 | |ontology_enrichment_uberon=UBERON:0005743!1.80e-62!86;UBERON:0000073!7.68e-61!94;UBERON:0001016!7.68e-61!94;UBERON:0007023!1.77e-60!115;UBERON:0001017!1.36e-59!82;UBERON:0001049!2.12e-56!57;UBERON:0005068!2.12e-56!57;UBERON:0006241!2.12e-56!57;UBERON:0007135!2.12e-56!57;UBERON:0002346!3.01e-51!90;UBERON:0003075!1.74e-50!86;UBERON:0007284!1.74e-50!86;UBERON:0002616!2.34e-48!59;UBERON:0000955!1.01e-46!69;UBERON:0006238!1.01e-46!69;UBERON:0003080!1.57e-44!42;UBERON:0002780!8.59e-44!41;UBERON:0001890!8.59e-44!41;UBERON:0006240!8.59e-44!41;UBERON:0001893!2.71e-38!34;UBERON:0003056!2.74e-38!61;UBERON:0002020!3.68e-38!34;UBERON:0003528!3.68e-38!34;UBERON:0002791!3.71e-37!33;UBERON:0001869!1.58e-36!32;UBERON:0000924!4.38e-36!173;UBERON:0006601!4.38e-36!173;UBERON:0004121!5.75e-35!169;UBERON:0000153!5.38e-31!129;UBERON:0007811!5.38e-31!129;UBERON:0000033!9.19e-31!123;UBERON:0000956!4.22e-29!25;UBERON:0000203!4.22e-29!25;UBERON:0002619!1.34e-25!22;UBERON:0001950!1.18e-23!20;UBERON:0003076!1.12e-12!15;UBERON:0003057!1.12e-12!15;UBERON:0000025!5.97e-11!194;UBERON:0004732!1.12e-10!13;UBERON:0000064!1.74e-10!219;UBERON:0002420!1.90e-10!9;UBERON:0007245!1.90e-10!9;UBERON:0010009!1.90e-10!9;UBERON:0010011!1.90e-10!9;UBERON:0000454!1.90e-10!9;UBERON:0002308!2.15e-10!9;UBERON:0000125!2.15e-10!9;UBERON:0004733!7.53e-10!12;UBERON:0002028!7.53e-10!12;UBERON:0007277!7.53e-10!12;UBERON:0004111!1.03e-09!241;UBERON:0001871!1.14e-09!7;UBERON:0000922!2.26e-09!612;UBERON:0002298!1.45e-08!8;UBERON:0009663!1.55e-08!7;UBERON:0000477!2.46e-08!286;UBERON:0000200!4.23e-08!6;UBERON:0000481!4.38e-08!347;UBERON:0000468!2.17e-07!659;UBERON:0002680!3.20e-07!9;UBERON:0001895!3.20e-07!9;UBERON:0010092!3.20e-07!9;UBERON:0000062!4.18e-07!511;UBERON:0001872!4.56e-07!5;UBERON:0002050!5.41e-07!605;UBERON:0005423!5.41e-07!605;UBERON:0000475!5.96e-07!365;UBERON:0002021!6.03e-07!5;UBERON:0001894!6.48e-07!7;UBERON:0006222!6.48e-07!7 | ||
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| ||
|short_description=p1@SLC35F1 | |short_description=p1@SLC35F1 | ||
}} | }} |
Latest revision as of 02:30, 20 September 2015
Short description: | p1@SLC35F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC35F1_5end |
Coexpression cluster: | C1198_Neural_parietal_occipital_Astrocyte_brain_duodenum_temporal |
Association with transcript: | -253bp_to_ENST00000360388, NM_001029858, uc003pxx.3_5end |
EntrezGene: | SLC35F1 |
HGNC: | 21483 |
UniProt: | Q5T1Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.87e-12 | 8 |
neural cell | 3.50e-09 | 25 |
neuron | 1.04e-08 | 6 |
neuroblast | 1.04e-08 | 6 |
electrically signaling cell | 1.04e-08 | 6 |
embryonic stem cell | 6.96e-07 | 5 |